Tag ner [at least 200 articles] Export

Recent papers classified by the tag ner.

	Disorders of nucleotide excision repair: the genetic and molecular basis of heterogeneity [My Copy] Nature Reviews Genetics, Vol. 10, No. 11. (07 October 2009), pp. 756-768. by James E. Cleaver, Ernest T. Lam, Ingrid Revet posted to ner by merpublic on 2009-10-19 19:21:21 as
	A realistic assessment of methods for extracting gene/protein interactions from free text. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (28 July 2009), 233. by Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd posted to tools text-mining protein_protein_interactions ner gene_names by martingerner on 2009-10-08 10:19:41 as along with 11 people and 4 groups henk-cul DTD102 satre farzanehs grahamc mitko sjcockell sillitoe andrewclegg cisevol barriot dbmi-nlp Journal picks Orengo Group Journal Picks BergmanLab
	Extracting names from natural-language text [My Copy] (1997) by Yael Ravin, Nina Wacholder posted to text-mining nlp ner by ianturton on 2009-10-02 18:20:47 as along with 1 person and 1 group arafalov Named Entity Recognition
	Weakly-supervised discovery of named entities using web search queries [My Copy] In CIKM '07: Proceedings of the sixteenth ACM conference on Conference on information and knowledge management (2007), pp. 683-690. by Marius Paşca posted to web text-mining nlp ner information-retrieval by ianturton on 2009-09-28 19:48:18 as along with 3 people arjen ChaTo pprett
	A framework for named entity recognition in the open domain [My Copy] In In Proceedings of the Recent Advances in Natural Language Processing (RANLP (2003), pp. 137-144. by Richard Evans posted to nlp ner by ianturton on 2009-09-26 23:19:24 as along with 1 person and 1 group arafalov Named Entity Recognition
	Domain Adaptation with Latent Semantic Association for Named Entity Recognition [My Copy] In Proceedings of Human Language Technologies: The 2009 Annual Conference of the North American Chapter of the Association for Computational Linguistics (June 2009), pp. 281-289. by Honglei Guo, Huijia Zhu, Zhili Guo, Xiaoxun Zhang, Xian Wu, Zhong Su posted to ner by swlee on 2009-09-19 04:17:29 as
	Design Challenges and Misconceptions in Named Entity Recognition [My Copy] In Proceedings of the Thirteenth Conference on Computational Natural Language Learning (CoNLL-2009) (June 2009), pp. 147-155. by Lev Ratinov, Dan Roth posted to ner by swlee on 2009-09-19 04:17:09 as
	Analysing Wikipedia and Gold-Standard Corpora for NER Training [My Copy] In Proceedings of the 12th Conference of the European Chapter of the ACL (EACL 2009) (March 2009), pp. 612-620. by Joel Nothman, Tara Murphy, James R. Curran posted to wikipedia training ner gold-standard for corpora and analysing by swlee on 2009-09-19 04:16:39 as along with 2 people AlisonBabeu jnothman
	Unsupervised Named-Entity Recognition: Generating Gazetteers and Resolving Ambiguity [My Copy] Advances in Artificial Intelligence (2006), pp. 266-277. by David Nadeau, Peter Turney, Stan Matwin posted to unsupervised ner by swlee on 2009-09-19 03:27:11 as along with 6 people and 1 group mariusausterschulte arafalov sids topher AlisonBabeu brightbyte oktave-labs
	Entity Extraction via Ensemble Semantics [My Copy] In Proceedings of the 2009 Conference on Empirical Methods in Natural Language Processing (August 2009), pp. 238-247. by Marco Pennacchiotti, Patrick Pantel posted to ner by swlee on 2009-09-19 02:36:15 as
	Online New Event Detection Based on IPLSA [My Copy] Advanced Data Mining and Applications (2009), pp. 397-408. by Xiaoming Zhang, Zhoujun Li posted to text_classification text-mining nlp news ner ned by ianturton on 2009-09-18 16:51:37 as
	New event detection based on indexing-tree and named entity [My Copy] In SIGIR '07: Proceedings of the 30th annual international ACM SIGIR conference on Research and development in information retrieval (2007), pp. 215-222. by Kuo Zhang, Juan Zi, Li G. Wu posted to text-mining nlp news ner events clustering by ianturton on 2009-09-18 16:48:59 as along with 3 people fiacobelli wyf181 julianpan
	On-Line New Event Detection using Single Pass Clustering TITLE2: [My Copy] (1998) by R. Papka, J. Allan posted to text-mining nlp ner ned events by ianturton on 2009-09-18 16:47:15 as
	A Survey of Named Entity Recognition and Classification [My Copy] Lingvisticae Investigationes, Vol. 30 (2007), pp. 3-26. by David Nadeau, Satoshi Sekine posted to review ner classification by ianturton on 2009-09-15 19:05:10 as along with 1 person and 1 group tobysbookmarks NLP
	Locating Complex Named Entities in Web Text [My Copy] In In Proc. of IJCAI (2007) by Doug Downey, Matthew Broadhead, Oren Etzioni posted to web_pages text-mining nlp ner by ianturton on 2009-09-15 18:07:35 as along with 3 people and 2 groups tsunol hehrig arafalov NLP Named Entity Recognition
	Named Entity recognition without gazetteers [My Copy] In Proceedings of the ninth conference on European chapter of the Association for Computational Linguistics (1999), pp. 1-8. by Andrei Mikheev, Marc Moens, Claire Grover posted to text-mining ner by ianturton on 2009-09-15 18:05:10 as along with 4 people and 2 groups arafalov nhoussos dfrankow harperf Named Entity Recognition GroupLens
	Text classification and named entities for new event detection [My Copy] In SIGIR '04: Proceedings of the 27th annual international ACM SIGIR conference on Research and development in information retrieval (2004), pp. 297-304. by Giridhar Kumaran, James Allan posted to vector_space text_classification text-mining nlp ner events by ianturton on 2009-09-15 16:01:52 as along with 6 people and 1 group bwalenz fukumori wyf181 brusilovsky julianpan codex Adaptive-Web
	Geographical information retrieval [My Copy] Int. J. Geogr. Inf. Sci., Vol. 22, No. 3. (2008), pp. 219-228. by Christopher B. Jones, Ross S. Purves posted to text-mining ner gir geographical_information by ianturton on 2009-09-15 15:57:31 as along with 1 person jgaffuri
	Acquisition of a vernacular gazetteer from web sources [My Copy] In LOCWEB '08: Proceedings of the first international workshop on Location and the web (2008), pp. 61-64. by Florian A. Twaroch, Christopher B. Jones, Alia I. Abdelmoty posted to text-mining ner gazetteer by ianturton on 2009-09-15 15:46:56 as along with 2 people nandipati AlisonBabeu
	Postal Address Detection from Web Documents [My Copy] Web Information Retrieval and Integration, 2005. WIRI '05. Proceedings. International Workshop on Challenges in In Web Information Retrieval and Integration, 2005. WIRI '05. Proceedings. International Workshop on Challenges in (2005), pp. 40-45. by Lin Can, Zhang Qian, Meng Xiaofeng, Liu Wenyin posted to text-mining ner addresses by ianturton on 2009-09-08 23:30:38 as
	An Algorithm that Learns What's in a Name [My Copy] Machine Learning, Vol. 34, No. 1. (1 February 1999), pp. 211-231. by Daniel M. Bikel, Richard Schwartz, Ralph M. Weischedel posted to text-mining text nlp ner disambiguation by ianturton to the group Named Entity Recognition on 2009-09-08 23:12:32 as along with 2 people dmnapolitano nhoussos
	Proper Name Extraction from Non-Journalistic Texts [My Copy] In In Computational Linguistics in the Netherlands, Vol. 44 (2001), pp. 144-157. by Thierry Poibeau, Leila Kosseim posted to text-mining ner algorithm by ianturton on 2009-09-08 18:54:49 as
	Unsupervised named-entity extraction from the web: an experimental study [My Copy] Artif. Intell., Vol. 165, No. 1. (June 2005), pp. 91-134. by Oren Etzioni, Michael Cafarella, Doug Downey, et al.Ana-Maria Popescu, Tal Shaked, Stephen Soderland, Daniel S. Weld, Alexander Yates posted to web nlp ner by ianturton on 2009-08-31 20:46:46 as along with 6 people ttylenda amac bhaddow johnkork pflynn lillejul
	Boosting a Semantic Search Engine by Named Entities [My Copy] Foundations of Intelligent Systems (2009), pp. 241-250. by Annalina Caputo, Pierpaolo Basile, Giovanni Semeraro posted to ner ir by arafalov on 2009-08-29 05:21:03 as
	Language independent NER using a unified model of internal and contextual evidence [My Copy] In COLING-02: proceedings of the 6th conference on Natural language learning (2002), pp. 1-4. by Silviu Cucerzan, David Yarowsky posted to detection entity ner by fiacobelli on 2009-08-07 21:00:46 as
	BioInfer: a corpus for information extraction in the biomedical domain [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 50. by Sampo Pyysalo, Filip Ginter, Juho Heimonen, et al.Jari Bjorne, Jorma Boberg, Jouni Jarvinen, Tapio Salakoski posted to biology ner nested_ner by arafalov on 2009-08-04 00:06:17 as along with 10 people and 1 group satre farzanehs sacebro yas lynnefox bhaddow johnkork balex kemo mircea T_lab
	The strength of co-authorship in gene name disambiguation [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (29 January 2008), 69. by Richard Farkas posted to gene_names ner text-mining by martingerner on 2009-07-27 15:48:13 as along with 3 people and 1 group Effie akastrin yas NaCTeM
	Impaired spermatogenesis and elevated spontaneous tumorigenesis in xeroderma pigmentosum group A gene (Xpa)-deficient mice. [My Copy] DNA repair, Vol. 7, No. 12. (1 December 2008), pp. 1938-1950. by H. Nakane, S. Hirota, P. J. Brooks, et al.Y. Nakabeppu, Y. Nakatsu, Y. Nishimune, A. Iino, K. Tanaka posted to ner spermatogenesis xpa by ksvogel on 2009-06-23 21:52:55 as
	2006. A proposal to automatically build and maintain gazetteers for named entity recognition by using Wikipedia [My Copy] In In EACL 2006 by Antonio Toral posted to ner thesis by bwalenz on 2009-06-13 04:51:45 as
	The emerging in-silico scientist: how text-based bioinformatics is bridging biology and artificial intelligence. [My Copy] IEEE Eng Med Biol Mag, Vol. 23, No. 2. (r 2004), pp. 87-93. by J. D. Wren posted to basic ner text-mining by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 18:23:52 as along with 1 person and 1 group irenas dbk-lab
	Big data: The future of biocuration [My Copy] Nature, Vol. 455, No. 7209. (03 September 2008), pp. 47-50. by Doug Howe, Maria Costanzo, Petra Fey, et al.Takashi Gojobori, Linda Hannick, Winston Hide, David P. Hill, Renate Kania, Mary Schaeffer, Susan St Pierre, Simon Twigger, Owen White, Seung Yon Rhee posted to basic biocuration curation ner by eesruiz on 2009-06-12 18:11:06 as along with 22 people and 1 group applebyb shankark abhishek_tiwari kshameer barriot daforerog allysonlister guhjy jfr lindenb natstreet christoph_steinbeck thomaskelder druvus vobios hpiwowar amarois Zephyrus psique fgibson dullhunk neils Roswell Cancer Crosstalk
	Assessment of disease named entity recognition on a corpus of annotated sentences. [My Copy] BMC bioinformatics, Vol. 9 Suppl 3, No. Suppl 3. (2008), S3. by Antonio Jimeno, Ernesto Jimenez-Ruiz, Vivian Lee, Sylvain Gaudan, Rafael Berlanga, Dietrich Rebholz-Schuhmann posted to disease entity name ner recognition by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 18:08:38 as along with 6 people and 2 groups balajis cdepablo henk-cul Effie guhjy dullhunk dbmi-nlp NaCTeM
	Discovering gene–gene relations from sequential sentence patterns in biomedical literature [My Copy] Expert Systems with Applications, Vol. 33, No. 4. (November 2007), pp. 1036-1041. by J. Chiang, H. Liu, S. Chao, C. Chen posted to gene-gene ner netwo network by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 13:35:53 as
	Text mining for metabolic pathways, signaling cascades, and protein networks. [My Copy] Sci STKE, Vol. 2005, No. 283. (10 May 2005) by R. Hoffmann, M. Krallinger, E. Andres, J. Tamames, C. Blaschke, A. Valencia posted to basic gene-gene ner network protein-protein text-mining by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-06-12 13:07:53 as along with 7 people and 4 groups irenas matzke kuhn textoris yas marcius fisherp dbk-lab T_lab BioinfoCIPF SGU-CIPF
	OSIRISv1.2: a named entity recognition system for sequence variants of genes in biomedical literature [My Copy] BMC Bioinformatics, Vol. 9 (05 February 2008), 84. by Laura I. Furlong, Holger Dach, Martin Hofmann-Apitius, Ferran Sanz posted to extract name ner recognition by eesruiz on 2009-06-12 13:00:47 as along with 3 people henk-cul ibuch guhjy
	Accelerating the annotation of sparse named entities by dynamic sentence selection. [My Copy] BMC bioinformatics, Vol. 9 Suppl 11 (2008) by Y. Tsuruoka, J. Tsujii, S. Ananiadou posted to annotation corpus learning ner nlp by satre on 2009-06-09 06:15:46 as along with 3 people and 1 group Effie druvus dullhunk NaCTeM
	A study of abbreviations in MEDLINE abstracts. [My Copy] Proc AMIA Symp (2002), pp. 464-468. by H. Liu, A. R. Aronson, C. Friedman posted to ner text-mining by martingerner on 2009-06-08 15:29:25 as along with 2 people and 1 group yas irenas dbk-lab
	Recognizing names in biomedical texts: a machine learning approach. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 7. (1 May 2004), pp. 1178-1190. by GuoDong Zhou, Jie Zhang, Jian Su, Dan Shen, ChewLim Tan posted to bioinformatics biomedical ner powerbione text-mining by svozil to the group Bioinformatics on 2009-05-26 16:36:31 as along with 4 people and 2 groups henk-cul arafalov irenas farzanehs dbmi-nlp dbk-lab
	Identifying gene and protein mentions in text using conditional random fields [My Copy] BMC Bioinformatics, Vol. 6, No. Suppl 1. (2005), S6. by Ryan Mcdonald, Fernando Pereira posted to bioinformatics biomedical crf gene ner protein by svozil to the group Bioinformatics on 2009-05-26 15:43:13 as along with 6 people and 1 group robert85 yas bundschu bhaddow johnkork gmonce generif_paper
	EDGAR: extraction of drugs, genes and relations from the biomedical literature. [My Copy] Pac Symp Biocomput (2000), pp. 517-528. by T. C. Rindflesch, L. Tanabe, J. N. Weinstein, L. Hunter posted to bioinformatics edgar ner text-mining by svozil to the group Bioinformatics on 2009-05-24 20:51:19 as along with 3 people and 1 group irenas zlu ibuch dbk-lab
	What makes a gene name? Named entity recognition in the biomedical literature. [My Copy] Brief Bioinform, Vol. 6, No. 4. (December 2005), pp. 357-369. by U. Leser, J. Hakenberg posted to biology ner by eesruiz to the group ImagCom - Biomedical Text Computing on 2009-05-19 13:51:53 as along with 4 people and 1 group Sjitprasutwit svozil irenas miguel Bioinformatics
	Text-mining and information-retrieval services for molecular biology [My Copy] Genome Biology, Vol. 6, No. 7. (2005), 224. by Martin Krallinger, Alfonso Valencia posted to ner text-mining by martingerner on 2009-04-18 00:33:55 as along with 17 people and 6 groups carelcad artaban421 Scis0000002 lmichan henk-cul vkwn A_Hoogendam fisherp irenas Enro carlblesius textoris yas caporaso shimah78us cjeans spinaltap526 dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi T_lab biomedical-nlp
	Using the biological taxonomy to access biological literature with PathBinderH. [My Copy] Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2560-2562. by J. Ding, K. Viswanathan, D. Berleant, et al.L. Hughes, E. S. Wurtele, D. Ashlock, J. A. Dickerson, A. Fulmer, P. S. Schnable posted to biodiversity ner species text-mining by martingerner on 2009-04-18 00:25:56 as along with 4 people and 3 groups Effie cisevol makrehchi irenas NaCTeM BergmanLab dbk-lab
	Adventures in semantic publishing: exemplar semantic enhancements of a research article. [My Copy] PLoS computational biology, Vol. 5, No. 4. (17 April 2009), e1000361. by D. Shotton, K. Portwin, G. Klyne, A. Miles posted to ner text-mining by martingerner on 2009-04-18 00:23:18 as along with 34 people and 4 groups aaltenburger jfr applebyb artaban421 Zephyrus antonkratz RafG daforerog Scis0000002 ddunbar pajoma pick600 guhjy kevinemamy neils dswan Publicase vagoskar ThomasAabo gaoxiaobiye silberbauer perbohner rs druvus billga williamgunn cisevol Effie fgibson mikel_egana allysonlister dullhunk pauldobson Cortel Roswell Cancer Crosstalk musil BergmanLab NaCTeM
	Gene name ambiguity of eukaryotic nomenclatures. [My Copy] Bioinformatics, Vol. 21, No. 2. (15 January 2005), pp. 248-256. by L. Chen, H. Liu, C. Friedman posted to ambiquity gene ner nlp text-mining by svozil to the group Bioinformatics on 2009-04-08 09:54:45 as along with 4 people and 3 groups cisevol snuppepuppan irenas yas BergmanLab dbk-lab T_lab
	Term identification in the biomedical literature. [My Copy] J Biomed Inform, Vol. 37, No. 6. (December 2004), pp. 512-526. by M. Krauthammer, G. Nenadic posted to biomedical ner review text-mining by svozil to the group Bioinformatics on 2009-04-08 08:04:12 as along with 9 people and 4 groups artaban421 cisevol irenas kslibrarian bourne yas bhaddow kkaiser akastrin BergmanLab dbk-lab T_lab IEG
	Biological entity recognition with conditional random fields. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008), pp. 293-297. by Y. He, M. Kayaalp posted to abgene bioinformatics biomedical crf metamap ner semrep text-mining umls by svozil to the group Bioinformatics on 2009-04-05 09:01:09 as
	A survey of current work in biomedical text mining. [My Copy] Briefings in bioinformatics, Vol. 6, No. 1. (1 March 2005), pp. 57-71. by Aaron M. Cohen, William R. Hersh posted to bioinformatics classification extraction ner relationship review synonym text-mining by svozil to the group Bioinformatics on 2009-04-04 06:19:09 as along with 30 people and 8 groups artaban421 lmichan daforerog guelke eesruiz blogbrain fitzgeraldp2 henk-cul lauras mitko vkwn cisevol irenas carlblesius route145 yas natsu t11 hpiwowar fisherp biblio24 bhaddow johnkork c061978 kkaiser benfqt farzanehs satre lillejul TheresaNiederberger BergmanLab dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi T_lab Evidence-based-medicine IEG
	Frontiers of biomedical text mining: current progress [My Copy] Brief Bioinform (30 October 2007), bbm045. by Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B. Cohen posted to bioinformatics ner review text-mining by svozil to the group Bioinformatics on 2009-04-04 06:15:49 as along with 20 people and 2 groups artaban421 Effie eitanla1 junehlee Keywan arafalov henk-cul Waderoad vkwn farzanehs bqchinh cisevol guhjy yas dullhunk hpiwowar wchapman yggdrasil TheresaNiederberger irenas BergmanLab dbmi-nlp
	DNA repair in eukaryotes. [My Copy] Annual review of biochemistry, Vol. 65 (1996), pp. 135-167. by R. D. Wood posted to ber ghp mutation ner by Annab on 2009-03-24 17:23:10 as

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stack	77
nlp	58
text-mining	52
bib	38
bionlp	38
term	29
bio	26
biology	26
crf	24
gene	24
recognition	23
entity	21
protein	19
review	19
root	18
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named	17
stack-read	16
biomedical	15
text	14
bioinformatics	12
nested_ner	11
class	10
disambiguation	10
med	10
textmining	10
ppi	9
genia	8
hmm	8
icl	8
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clustering	7
basic	6
bootstrapping	6
classification	6
legal	6
name	6
tool	6
web	6
corpus	5
geocoding	5
ie	5
learning	5
presentation	5
terminology	5
ambiquity	4
gene-gene	4
guidelines	4
maxent	4
medline	4
network	4
relation-extraction	4
rpa	4
spanish	4
svm	4
xpa	4
bc1	3
ber	3
damage	3
dictionary	3
ercc1	3
events	3
extraction	3
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global	3
historical	3
iaa	3
mining	3
multilingual	3
pos	3
repair	3
unsupervised	3
yeast	3
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ambig	2
biocreative	2
coreference	2
data	2
dna	2
dsb	2
edgar	2
enzyme	2
helicase	2
metamap	2
nemam	2
news	2
pathway	2
powerbione	2
rad1	2
rad2	2
relationship	2
rule-based	2
species	2
survey	2
system-biology	2
text_classification	2
thesis	2
umls	2
var	2
xpc	2

Tag ner [at least 200 articles] Export

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