Tag networkestimation [52 articles] Export

Recent papers classified by the tag networkestimation.

	Molecular Network and Chromosomal Clustering of Genes Involved in Synaptic Plasticity in the Hippocampus [My Copy] J. Biol. Chem., Vol. 281, No. 40. (6 October 2006), pp. 30195-30211. by Chang S. Park, Ruomu Gong, Joshua Stuart, Shao-Jun Tang posted to clustering geneexpression networkestimation by shigepong on 2008-08-16 07:07:23 as
	The discovery of structural form. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 31. (5 August 2008), pp. 10687-10692. by Charles Kemp, Joshua B. Tenenbaum posted to networkestimation science system by shigepong on 2008-08-04 12:25:18 as along with 30 people and 3 groups briordan lmaurits anon_pl mthomure TRHvidsten ckai1 prydzews qwermish thiagomanel linhares vlachmore stober nojhan stringertheory thefillm amatos markstoehr uhhhhhhhhhhm A_Olympia tmmurali jmchauvet rsantana tbloomf kevinemamy markusd jborn deubel guhjy Zephyrus jago Optimization logics of knowledge Roswell Cancer Crosstalk
	Multiple tests of association with biological annotation metadata [My Copy] (20 May 2008) by Sandrine Dudoit, Sündüz Keleş, Mark J. van der Laan posted to fdr networkestimation by shigepong on 2008-05-22 02:06:23 as
	GraphWeb: mining heterogeneous biological networks for gene modules with functional significance. [My Copy] Nucleic acids research (6 May 2008) by Jüri Reimand, Laur Tooming, Hedi Peterson, Priit Adler, Jaak Vilo posted to networkestimation by shigepong on 2008-05-09 09:52:23 as along with 7 people gotgenes GustavoLacerda jfr guhjy pinney maralena ptrobajo
	The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks [My Copy] BMC Bioinformatics, Vol. 9 (02 May 2008), 227. by Anatolij P. Potapov, Bjorn Goemann, Edgar Wingender posted to networkestimation by shigepong on 2008-05-07 09:59:54 as along with 6 people kshameer lptolik jfr jiny bootsy joaocarrico
	ChIPCodis: Mining complex regulatory systems in yeast by concurrent enrichment analysis of Chip-on-chip data. [My Copy] Bioinformatics (12 March 2008) by Federico Abascal, Pedro Carmona-Saez, Jose-Maria M. Carazo, Alberto Pascual-Montano posted to causality networkestimation by shigepong on 2008-03-16 09:12:30 as
	Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models. [My Copy] Bioinformatics (21 February 2008) by Osamu Hirose, Ryo Yoshida, Seiya Imoto, et al.Rui Yamaguchi, Tomoyuki Higuchi, D Stephen S. Charnock-Jones, Cristin Print, Satoru Miyano posted to networkestimation by shigepong on 2008-02-24 08:42:51 as along with 3 people and 1 group ggallone guhjy bertelsen Jarman Lab
	Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 987-994. by Yung-Keun Kwon, Kwang-Hyun Cho posted to networkestimation networkphysics by shigepong on 2008-02-23 01:52:15 as along with 4 people abhishek_tiwari guhjy grahamc bootsy
	Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs. [My Copy] Bioinformatics (19 February 2008) by Juby Jacob, Marcel Jentsch, Dennis Kostka, Stefan Bentink, Rainer Spang posted to networkestimation by shigepong on 2008-02-23 01:52:06 as along with 2 people czeller ptrobajo
	Estimating Large Scale Signaling Networks through Nested Effect Models with Intervention Effects from Microarray Data. [My Copy] Bioinformatics (28 January 2008) by Holger Fröhlich, Mark Fellmann, Holger Sültmann, Annemarie Poustka, Tim Beissbarth posted to networkestimation by shigepong on 2008-02-03 02:35:10 as along with 3 people jfr guhjy czeller
	Inferring gene expression dynamics via functional regression analysis. [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 January 2008) by Hans-Georg G. Muller, Jeng-Min M. Chiou, Xiaoyan Leng posted to networkestimation by shigepong on 2008-02-03 02:25:04 as along with 1 person guhjy
	Reconstruction of genetic association networks from microarray data: A partial least squares approach. [My Copy] Bioinformatics (18 January 2008) by Vasyl Pihur, Somnath Datta, Susmita Datta posted to furuya networkestimation by shigepong on 2008-01-23 07:21:40 as along with 6 people guhjy cannin jfr aconesa sotacam winterschlaefer
	Function approximation approach to the inference of reduced NGnet models of genetic networks [My Copy] BMC Bioinformatics, Vol. 9 (14 January 2008), 23. by Shuhei Kimura, Katsuki Sonoda, Soichiro Yamane, Hideki Maeda, Koki Matsumura, Mariko Hatakeyama posted to networkestimation by shigepong on 2008-01-21 13:45:44 as along with 1 person guhjy
	Supervised inference of gene-regulatory networks [My Copy] BMC Bioinformatics, Vol. 9 (04 January 2008), 2. by Cuong C. To, Jiri Vohradsky posted to furuya networkestimation by shigepong on 2008-01-09 08:56:02 as along with 3 people ajbattle gracio guhjy
	Generating confidence intervals on biological networks [My Copy] BMC Bioinformatics, Vol. 8 (30 November 2007), 467. by Thomas Thorne, Michael P. H. Stumpf posted to networkestimation by shigepong on 2007-12-10 15:10:43 as along with 6 people and 2 groups guhjy stajich grahamc laughcry zwang sobolevnrm baker-group Mycology
	Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 9 (2007) by H. Kim, H. Park, B. L. Drake posted to factor furuya matrixdecomposition networkestimation by shigepong on 2007-12-08 01:25:44 as along with 2 people svozil guhjy
	Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (02 November 2007), 427. by Jeff Chou, Tong Zhou, William Kaufmann, Richard Paules, Pierre Bushel posted to furuya microarray networkestimation by shigepong on 2007-11-08 02:58:41 as along with 6 people and 1 group tonamswish thegoose2 tharris hpaces dps renatomilani C. elegans / WormBase
	A systems biology approach for pathway level analysis [My Copy] Genome Research, Vol. 17, No. 10. (4 October 2007), pp. 1537-1545. by Sorin Draghici, Purvesh Khatri, Adi L. Tarca, et al.Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero posted to networkestimation by shigepong on 2007-11-06 11:19:22 as along with 22 people and 2 groups zufar bertelsen tonamswish gbloeb cgaugain ptrobajo pengchy tmmurali dragonrez jfr gurkanbebek grahamc zwang cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics OPIG
	A Gene Regulatory Network Subcircuit Drives a Dynamic Pattern of Gene Expression [My Copy] Science, Vol. 318, No. 5851. (2 November 2007), pp. 794-797. by Joel Smith, Christina Theodoris, Eric H. Davidson posted to networkestimation by shigepong on 2007-11-05 23:46:26 as along with 8 people and 2 groups leemond31 jjray joseph_x_zhou cwbrown lshaw zwang heliopais hpaces bioNetwork_sysBio EisenLab
	Construction, visualisation, and clustering of transcription networks from microarray expression data. [My Copy] PLoS computational biology, Vol. 3, No. 10. (1 October 2007), pp. 2032-2042. by Tom C. Freeman, Leon Goldovsky, Markus Brosch, et al.Stijn van Dongen, Pierre Mazière, Russell J. Grocock, Shiri Freilich, Janet Thornton, Anton J. Enright posted to miroarray networkestimation by shigepong on 2007-11-01 09:24:17 as along with 9 people ptrobajo jwhitney nolodie guhjy jfr sebastien_vigneau giovanni heliopais waszak
	Empirical Multiscale Networks of Cellular Regulation. [My Copy] PLoS Comput Biol, Vol. 3, No. 10. (19 October 2007) by Benjamin de Bivort, Sui Huang, Yaneer Bar-Yam posted to furuya multiscale networkestimation by shigepong on 2007-10-25 08:48:37 as along with 2 people and 2 groups guhjy mattjb ComplexAdaptiveSystems DSTO-CAS
	Network analysis of oncogenic Ras activation in cancer. [My Copy] Science (New York, N.Y.), Vol. 318, No. 5849. (19 October 2007), pp. 463-467. by E. C. Stites, P. C. Trampont, Z. Ma, K. S. Ravichandran posted to cancer networkestimation by shigepong on 2007-10-21 09:56:41 as along with 5 people and 1 group mingzhi fesousa jackjackjjj zwang oelemento Complex Networks
	Extracting Three-way Gene Interactions from Microarray Data. [My Copy] Bioinformatics (5 October 2007) by Jiexin Zhang, Yuan Ji, Li Zhang posted to microarrayimage networkestimation by shigepong on 2007-10-10 11:11:52 as along with 3 people tmmurali jfr waszak
	Current approaches to gene regulatory network modelling [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 6. (2007), S9. by Thomas Schlitt, Alvis Brazma posted to furuya networkestimation by shigepong on 2007-10-04 06:37:27 as along with 7 people antonkratz Borelli aviad_work kengg ramakris nicholasflann bertelsen
	From biophysics to evolutionary genetics: statistical aspects of gene regulation. [My Copy] BMC bioinformatics, Vol. 8 Suppl 6 (2007) by Michael Lässig posted to networkestimation by shigepong on 2007-10-04 06:37:18 as along with 7 people sockington leemond31 jjray heliopais guhjy bertelsen bpcusack
	Inferring cellular networks - a review [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 6. (2007), S5. by Florian Markowetz, Rainer Spang posted to networkestimation by shigepong on 2007-10-04 06:37:10 as along with 14 people antonkratz daforerog chica ocs roys cswinburne ndiaz edwardmorrissey guhjy tmmurali dejori heliopais bertelsen czeller
	Finding regulatory elements and regulatory motifs: a general probabilistic framework [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 6. (2007), S4. by Erik van Nimwegen posted to furuya networkestimation by shigepong on 2007-10-04 06:37:04 as along with 2 people nklee maximilianh
	Transcriptional regulation at a glance. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 6 (2007) by S. Sperling posted to networkestimation by shigepong on 2007-10-04 06:36:54 as along with 2 people guhjy brant
	ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 1 (2006) by A. A. Margolin, I. Nemenman, K. Basso, et al.C. Wiggins, G. Stolovitzky, R. Dalla Favera, A. Califano posted to furuya networkestimation by shigepong on 2007-10-02 16:05:12 as along with 17 people dolchan tonamswish Neeperando akraemer APRegier verdicchio behindtherabbit kaarsinogen mbehbah1 druvus giovenko ptrobajo kentsis tmmurali jfr natstreet heliopais
	Inferring Transcriptional Regulatory Networks from High-throughput Data. [My Copy] Bioinformatics (22 September 2007) by Rui-Sheng S. Wang, Yong Wang, Xiang-Sun S. Zhang, Luonan Chen posted to furuya networkestimation by shigepong on 2007-09-26 07:07:00 as along with 5 people Borelli wnpx rdiaz sebastien_vigneau cabbagezs
	A framework for significance analysis of gene expression data using dimension reduction methods [My Copy] BMC Bioinformatics, Vol. 8 (18 September 2007), 346. by Lars Gidskehaug, Endre Anderssen, Arnar Flatberg, Bjorn K. Alsberg posted to microarray networkestimation by shigepong on 2007-09-21 08:34:38 as
	Log-linear model based multifactor dimensionality reduction method to detect gene-gene interactions. [My Copy] Bioinformatics (14 September 2007) by Seung Yeoun Y. Lee, Yujin Chung, Robert C C. Elston, Youngchul Kim, Taesung Park posted to causality furuya geneselection networkestimation by shigepong on 2007-09-19 06:47:56 as along with 2 people guhjy rdiaz
	A novel non-overlapping bi-clustering algorithm for network generation using Living Cell Array data. [My Copy] Bioinformatics (7 September 2007) by Yang E, P T T. Foteinou, K R R. King, M L L. Yarmush, I P P. Androulakis posted to clustering furuya networkestimation by shigepong on 2007-09-12 06:46:41 as along with 1 person rdiaz
	Mining Biological Networks for Unknown Pathways. [My Copy] Bioinformatics (30 August 2007) by Ali Cakmak, Gultekin Ozsoyoglu posted to networkestimation by shigepong on 2007-09-05 07:30:58 as along with 8 people cswinburne guhjy tmmurali bluto cabbagezs idonaldson acakmak mdstobbe
	A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microarray experiments [My Copy] BMC Bioinformatics, Vol. 8 (29 August 2007), 317. by Peter Larsen, Eyad Almasri, Guanrao Chen, Yang Dai posted to microarray networkestimation by shigepong on 2007-09-01 06:38:38 as along with 4 people SaraNasser mbehbah1 guhjy jfr
	Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory [My Copy] BMC Bioinformatics, Vol. 8 (14 August 2007), 299. by Feng Luo, Yunfeng Yang, Jianxin Zhong, et al.Haichun Gao, Latifur Khan, Dorothea K. Thompson, Jizhong Zhou posted to microarray networkestimation by shigepong on 2007-08-19 14:35:55 as along with 2 people guhjy birdsky
	Bayesian inference for dynamic transcriptional regulation; the Hes1 system as a case study. [My Copy] Bioinformatics (28 July 2007) by Elizabeth A A. Heron, Bärbel Finkenstädt, David A A. Rand posted to dynamics networkestimation by shigepong on 2007-08-01 07:18:30 as
	Automatic genome-wide reconstruction of phylogenetic gene trees [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i549-558. by Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Regev posted to networkestimation by shigepong on 2007-07-27 01:45:53 as along with 7 people and 1 group djkt biomcgary thegoose2 gjuggler stajich seitentaisei tharris Mycology
	Supervised reconstruction of biological networks with local models [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i57-65. by Kevin Bleakley, Gerard Biau, Jean-Philippe Vert posted to networkestimation by shigepong on 2007-07-27 01:43:37 as along with 3 people seb1 ptrobajo anf
	A graph-based approach to systematically reconstruct human transcriptional regulatory modules [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i577-586. by Xifeng Yan, Michael R. Mehan, Yu Huang, Michael S. Waterman, Philip S. Yu, Xianghong J. Zhou posted to networkestimation by shigepong on 2007-07-27 01:43:28 as along with 7 people vingron kengg cswinburne jiny jfr dragonrez tmmurali
	Nearest Neighbor Networks: clustering expression data based on gene neighborhoods [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Curtis Huttenhower, Avi Flamholz, Jessica Landis, et al.Sauhard Sahi, Chad Myers, Kellen Olszewski, Matthew Hibbs, Nathan Siemers, Olga Troyanskaya, Hilary Coller posted to networkestimation by shigepong on 2007-07-15 08:14:25 as along with 3 people jfr GeeSharpMinor julesyoo
	Bayesian Orthogonal Least Squares (BOLS) algorithm for reverse engineering of gene regulatory networks [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Chang S. Kim posted to matrixdecomposition networkestimation by shigepong on 2007-07-15 08:13:43 as along with 4 people guhjy rdiaz frohike zwang
	Mining co-regulated gene profiles for the detection of functional associations in gene expression data. [My Copy] Bioinformatics (30 May 2007) by Attila Gyenesei, Ulrich Wagner, Simon Barkow-Oesterreicher, Etzard Stolte, Ralph Schlapbach posted to microarray networkestimation by shigepong on 2007-06-02 07:21:56 as along with 3 people isimpson ptrobajo renatomilani
	Robust detection and verification of linear relationships to generate metabolic networks using estimates of technical errors [My Copy] BMC Bioinformatics, Vol. 8 (21 May 2007), 162. by Frank Kose, Jan Budzies, Matthias Holschneider, Oliver Fiehn posted to networkestimation by shigepong on 2007-05-24 09:18:54 as along with 2 people jhatrimatri JeremyZucker
	Network motifs: theory and experimental approaches [My Copy] Nature Reviews Genetics, Vol. 8, No. 6. (01 June 2007), pp. 450-461. by Uri Alon posted to networkestimation by shigepong on 2007-05-21 01:32:07 as along with 31 people and 4 groups nurban mjoach vtraag mlee1 myzhang hkuhn mtagaya cambray dswan renatomilani heliopais snow_dragon druvus pengchy cswinburne dlobo kentz icases aalibes cmmorel jtaylor dbikard margaritis zwang grinfish Pascalichouchou xingxu karfunkel vietanh0 haarcuba Borelli GEB TNT Centre de Recherches Interdisciplinaires SynBioSys
	Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregressive process. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 2 (2007) by Rainer Opgen-Rhein, Korbinian Strimmer posted to causality furuya networkestimation timeseries by shigepong on 2007-05-13 07:32:57 as along with 1 person roys
	Inferring biological networks with output kernel trees. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 2 (2007) by P. Geurts, N. Touleimat, M. Dutreix, F. d'Alché-Buc posted to networkestimation by shigepong on 2007-05-13 07:32:24 as along with 1 person ajbattle
	Validating module network learning algorithms using simulated data [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 2. (2007) by Tom Michoel, Steven Maere, Eric Bonnet, et al.Anagha Joshi, Yvan Saeys, Tim Van den Bulcke, Koenraad Van Leemput, Piet van Remortel, Martin Kuiper, Kathleen Marchal, Yves Van de Peer posted to module networkestimation by shigepong on 2007-05-13 07:31:49 as along with 9 people and 2 groups tonamswish tvdbulck irinamohorianu ptrobajo ajgentles erbon vietanh0 mattjb srp33 ComplexAdaptiveSystems DSTO-CAS
	Factor analysis for gene regulatory networks and transcription factor activity profiles. [My Copy] BMC bioinformatics, Vol. 8 (23 February 2007), 61. by Iosifina Pournara, Lorenz Wernisch posted to factor networkestimation by shigepong on 2007-02-28 15:43:22 as along with 9 people bertelsen ptrobajo isimpson akastrin guhjy lp2 hms kyriakos heliopais
	Boolean networks using the chi-square test for inferring large-scale gene regulatory networks. [My Copy] BMC bioinformatics, Vol. 8 (01 February 2007), 37. by Haseong Kim, Jae K. Lee, Taesung Park posted to networkestimation by shigepong on 2007-02-04 16:07:57 as along with 2 people sockington heliopais

Note: You may cite this page as: http://www.citeulike.org/tag/networkestimation

Result page: 1 2 Next

furuya	12
microarray	6
causality	3
clustering	2
factor	2
matrixdecomposition	2
cancer	1
dynamics	1
fdr	1
geneexpression	1
geneselection	1
microarrayimage	1
miroarray	1
module	1
multiscale	1
networkphysics	1
science	1
system	1
timeseries	1

Tag networkestimation [52 articles] Export

Related Tags