Tag normalisation [47 articles] Export

Recent papers classified by the tag normalisation.

	ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 358. by Enrico Glaab, Jonathan Garibaldi, Natalio Krasnogor posted to web study normalisation modular mining microarray meta cross array application analysis by dswan to the group Bioinformatics on 2009-11-06 17:04:14 as along with 2 people heliopais neils
	A modified LOESS normalization applied to microRNA arrays: a comparative evaluation [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2685-2691. by Davide Risso, Maria S. Massa, Monica Chiogna, Chiara Romualdi posted to normalisation modified mirna microrna loess evaluation comparative by dswan on 2009-10-12 11:21:03 as along with 9 people and 1 group VR lwaldron heliopais renatomilani rdiaz nuin guhjy myzhang ealloza microRNA
	Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (02 October 2008), 409. by Johan Staaf, Johan Vallon-Christersson, David Lindgren, et al.Gunnar Juliusson, Richard Rosenquist, Mattias Höglund, Ake Borg, Markus Ringnér posted to normalisation cnvbook cnv by vplagnol on 2009-08-28 11:51:30 as along with 1 person shikin
	Comments on sequence normalization of tiling array expression [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2171-2173. by Don Gilbert, Andreas Rechtsteiner posted to tiling sequence normalisation expression comments array by dswan to the group Bioinformatics on 2009-08-20 10:37:25 as along with 3 people humburg djkt rdiaz
	Robust estimators for expression analysis [My Copy] Bioinformatics, Vol. 18, No. 12. (1 December 2002), pp. 1585-1592. by Earl Hubbell, Wei-Min Liu, Rui Mei posted to gene-expression normalisation by vertikalist to the group BTS-PT-AS-CS on 2009-07-28 13:42:36 as along with 7 people humburg bertelsen lawraga VGreiff GeeSharpMinor jfr wirawan
	Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3683-3685. by Claire L. Wilson, Crispin J. Miller posted to gene-expression normalisation by vertikalist to the group BTS-PT-AS-CS on 2009-07-28 13:41:05 as along with 4 people daforerog zufar frohike bertelsen
	A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 2. (22 January 2003), pp. 185-193. by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed posted to normalisation microarray facsnormpaper cnvbook by vplagnol on 2009-07-20 08:59:58 as along with 22 people jperkins brianb neils ipark-kaist shikin michaelbarton emptyhb noushin huiminC cassj Dax42 pcahan1 chad_davis RMGraze gjuggler filmsternchen qmwwallace joepickrell ghattem bertelsen vertikalist GeeSharpMinor
	Variance stabilization applied to microarray data calibration and to the quantification of differential expression [My Copy] Bioinformatics, Vol. 18, No. suppl_1. (1 July 2002), pp. S96-104. by Wolfgang Huber, Anja von Heydebreck, Holger Sultmann, Annemarie Poustka, Martin Vingron posted to microarray normalisation variance by fpattyn on 2009-06-22 15:21:05 as along with 2 people humburg baldigroup
	Ratio adjustment and calibration scheme for gene-wise normalization to enhance microarray inter-study prediction [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1655-1661. by Chunrong Cheng, Kui Shen, Chi Song, Jianhua Luo, George C. Tseng posted to adjustment analysis calibration enhance gene inter meta microrray normalisation prediction ratio scheme study wise by dswan to the group Bioinformatics on 2009-06-18 11:12:28 as along with 2 people zufar rdiaz
	Normalization of boutique two-color microarrays with a high proportion of differentially expressed probes [My Copy] Genome Biology, Vol. 8 (04 January 2007), R2. by Alicia Oshlack, Dianne Emslie, Lynn Corcoran, Gordon K. Smyth posted to 2 boutique colour differential expressed high microarray normalisation probes proportion two by dswan to the group Bioinformatics on 2009-05-15 12:09:57 as along with 2 people jfr GeeSharpMinor
	Nominalization and alternations in biomedical language. [My Copy] PLoS ONE, Vol. 3, No. 9. (2008) by K. B. Cohen, M. Palmer, L. Hunter posted to normalisation by Effie to the group NaCTeM on 2009-04-18 02:15:35 as along with 3 people and 1 group henk-cul vlachmore yas dbmi-nlp
	Normalizing biomedical terms by minimizing ambiguity and variability [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008) by Yoshimasa Tsuruoka, John Mcnaught, Sophia Ananiadou posted to normalisation term by Effie to the group NaCTeM on 2009-04-08 08:36:57 as along with 7 people and 1 group schwartzjmc cisevol yas dullhunk vlachmore satre guhjy BergmanLab
	Papers on Normalization, Variable Selection, Classification, or Clustering of Microarray Data. [My Copy] Bioinformatics (Oxford, England) (10 February 2009) by David M M. Rocke, Trey Ideker, Olga Troyanskaya, John Quackenbush, Joaquin Dopazo posted to bioinformatics classification clustering data journal microarray normalisation selection variable by dswan on 2009-03-13 09:38:51 as along with 5 people rdiaz djkt neils Zephyrus renatomilani
	Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes [My Copy] Genome Biology, Vol. 3, No. 7. (18 June 2002) by Jo Vandesompele, Katleen De Preter, Filip Pattyn, et al.Bruce Poppe, Nadine Van Roy, Anne De Paepe, Frank Speleman posted to normalisation real rt-pcr time by ArtemPankin to the group Khavkin's lab on 2009-02-18 13:56:57 as along with 23 people and 1 group mlog yogita stharward brianb gdb lwaldron soojinclass1 maximilianh renatomilani pflock guhjy sebastien_vigneau mtruksa xingxu ablejec Yanno ecattell jfr cdawson qfwills aubinhon rschnee olberd GIG
	Evaluating Score Normalization Methods in Data Fusion [My Copy] Information Retrieval Technology In Information Retrieval Technology, AIRS 2006 (2006), pp. 642-648. by Shengli Wu, Fabio Crestani, Yaxin Bi posted to data-fusion fitting-method information-retrieval ir normalisation score sembysem syn2 by ifalk on 2009-02-09 10:57:41 as along with 1 person abellogin
	Use of normalization methods for analysis of microarrays containing a high degree of gene effects [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Terri Ni, William Lemon, Yu Shyr, Tao Zhong posted to effects gene microarray normalisation variation by dswan on 2008-12-11 10:28:13 as along with 5 people and 1 group jfr guhjy ghattem barriot GeeSharpMinor SIMR bioinformatics
	Fast Algorithms for Computing Sequence Distances by Exhaustive Substring Composition [My Copy] Algorithms for Molecular Biology, Vol. 3 (28 October 2008), 13. by Alberto Apostolico, Olgert Denas posted to arrays hybridisation normalisation sequence solexa by magusina on 2008-12-11 09:12:27 as along with 4 people treangen kittipat lptolik nuin
	Matched filtering with background suppression for improved quality of base peak chromatograms and mass spectra in liquid chromatography–mass spectrometry [My Copy] Analytica Chimica Acta, Vol. 454, No. 2. (11 March 2002), pp. 167-184. by Rolf Danielsson, Dan Bylund, Karin E. Markides posted to massspec metabolomics normalisation statistics by talponer on 2008-12-02 09:59:17 as along with 1 person robert
	"Hook"-calibration of GeneChip-microarrays: Theory and algorithm [My Copy] Algorithms for Molecular Biology, Vol. 3, No. 1. (2008) by Hans Binder, Stephan Preibisch posted to microarray normalisation by talponer on 2008-11-17 14:28:53 as along with 3 people zufar bertelsen jfr
	"Hook"-calibration of GeneChip-microarrays: Chip characteristics and expression measures [My Copy] Algorithms for Molecular Biology, Vol. 3, No. 1. (2008) by Hans Binder, Knut Krohn, Stephan Preibisch posted to microarray normalisation by talponer on 2008-11-17 14:28:07 as along with 2 people bertelsen jfr
	Background correction using dinucleotide affinities improves the performance of GCRMA. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by Raad Z. Gharaibeh, Anthony A. Fodor, Cynthia J. Gibas posted to gcrma normalisation by dswan on 2008-11-17 10:30:10 as along with 4 people schwalb bertelsen heliopais GeeSharpMinor
	Normalization of array-CGH data: influence of copy number imbalances [My Copy] BMC Genomics, Vol. 8, No. 1. (22 October 2007), 382. by Johan Staaf, Goran Jonsson, Markus Ringner, Johan V. Christersson posted to arrays cgh normalisation tiling by magusina on 2008-10-17 16:57:25 as along with 3 people stharward rdiaz jfr
	A fast Bayesian change point analysis for the segmentation of microarray data [My Copy] Bioinformatics, Vol. 24, No. 19. (1 October 2008), pp. 2143-2148. by Chandra Erdman, John W. Emerson posted to microarray normalisation tiling by talponer on 2008-09-29 14:50:25 as along with 2 people rdiaz guhjy
	Exploration, normalization, and summaries of high density oligonucleotide array probe level data [My Copy] Biostat, Vol. 4, No. 2. (1 April 2003), pp. 249-264. by Rafael A. Irizarry, Bridget Hobbs, Francois Collin, et al.Yasmin D. Beazer-Barclay, Kristen J. Antonellis, Uwe Scherf, Terence P. Speed posted to gene-expression normalisation by vertikalist on 2008-07-14 09:58:24 as along with 27 people and 4 groups jperkins VGreiff lwaldron shikin jfr YukaH huiminC robert85 emptyhb heliopais giovenko winterschlaefer miguel textoris Dax42 RMGraze fisherp tvdbulck dtc1 vpschulz rmk joepickrell ghattem bertelsen jo_davies waszak bakakaj MathBio Bioinformatics Computational_Systems_Biology Systems_Biology
	Selecting normalization genes for small diagnostic microarrays [My Copy] BMC Bioinformatics, Vol. 7 (22 August 2006), 388. by Jochen Jaeger, Rainer Spang posted to normalisation by magusina on 2008-05-01 18:48:51 as along with 1 person jfr
	Assessing the need for sequence-based normalization in tiling microarray experiments [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 988-997. by Royce, E. Thomas, Rozowsky, S. Joel, Gerstein, B. Mark posted to hybridisation normalisation tiling by magusina on 2008-04-25 12:24:42 as along with 1 person talponer
	Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets [My Copy] Genome Research, Vol. 18, No. 3. (7 March 2008), pp. 393-403. by David S. Johnson, Wei Li, D. Benjamin Gordon, et al.Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S. Carroll, Myles Brown, Paul Flicek, Christoph M. Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J. Farnham, Philipp Kapranov, David A. Nix, Thomas R. Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland D. Green, Jun S. Song, Scott A. Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D. Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C. Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P. Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M. Myers, Jason D. Lieb, X. Shirley Liu posted to hybridisation normalisation tiling by magusina on 2008-04-25 12:22:10 as along with 12 people and 2 groups fenghezi jfr kengg djkt xiaobeizhao cabbagezs idonaldson caseybrown lp2 stajich gracio gdb BergmanLab Mycology
	A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets [My Copy] Nucl. Acids Res. (1 April 2008), gkn133. by Hairong Wei, Pei F. Kuan, Shulan Tian, et al.Chuhu Yang, Jeff Nie, Srikumar Sengupta, Victor Ruotti, Gudrun A. Jonsdottir, Sunduz Keles, James A. Thomson, Ron Stewart posted to hybridisation normalisation tiling by magusina on 2008-04-25 12:20:17 as along with 1 person GeeSharpMinor
	Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data [My Copy] BMC Bioinformatics, Vol. 9 (07 February 2008), 88. by Wouter Meuleman, Judith Y. M. N. Engwegen, Marie-Christine W. Gast, Jos H. Beijnen, Marcel J. T. Reinders, Lodewyk F. A. Wessels posted to modelling normalisation by jxl on 2008-04-02 16:11:12 as along with 1 person ptrobajo
	Site independence of EPSP time course is mediated by dendritic I(h) in neocortical pyramidal neurons. [My Copy] J Neurophysiol, Vol. 83, No. 5. (May 2000), pp. 3177-3182. by S. R. Williams, G. J. Stuart posted to pyramidal normalisation neocortex hcn epsp couche5 by pgastrein on 2007-01-13 08:45:31 as along with 1 person agidon20
	On the Multivariate Normality of Data Arising from Lead Isotope Fields [My Copy] Journal of Archaeological Science, Vol. 26, No. 1. (January 1999), pp. 117-124. by M. J. Baxter posted to isotopes-du-plomb jas normalisation statistique by florecat on 2006-10-26 14:47:06 as
	A Natural Deduction System for Keisler's Quantification [My Copy] Electronic Notes in Theoretical Computer Science In Proceedings of the 11th Workshop on Logic, Language, Information and Computation (WoLLIC 2004), Vol. 123 (1 March 2005), pp. 229-240. by Christian J. Renteria, Edward H. Haeusler posted to keisler naturaldeduction normalisation pnc quantifier uncountable by greg_restall on 2006-06-06 13:04:34 as
	A semantical proof of the strong normalization theorem for full propositional classical natural deduction [My Copy] Archive for Mathematical Logic, Vol. 45, No. 3. (March 2006), pp. 357-364. by Karim Nour, Khelifa Saber posted to classical deduction natural normalisation pnc by greg_restall on 2006-05-25 01:37:20 as
	Effect of normalization on significance testing for oligonucleotide microarrays. [My Copy] J Biopharm Stat, Vol. 14, No. 3. (August 2004), pp. 575-589. by R. S. Parrish, H. J. Spencer posted to arrays method normalisation by ccots on 2006-04-27 18:31:41 as along with 2 people gupton ghattem
	Profound normalisation challenges remain in the analysis of data from microarray experiments. [My Copy] Appl Bioinformatics, Vol. 2, No. 4. (2003), pp. 193-195. by J. Lyons-Weiler posted to analysis biomarkers cancer data differentially expressed genes microarray normalisation normalization software statistics by cancerbioinformatics on 2006-01-28 14:04:11 as
	Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons [My Copy] Nat Neurosci, Vol. 3, No. 9. (September 2000), pp. 895-903. by Jeffrey C. Magee, Erik P. Cook posted to epsp normalisation signalintegration by pgastrein on 2005-11-24 18:15:28 as along with 1 person agidon20
	Dendritic Excitability of Mouse Frontal Cortex Pyramidal Neurons Is Shaped by the Interaction among HCN, Kir2, and Kleak Channels [My Copy] J. Neurosci., Vol. 25, No. 38. (21 September 2005), pp. 8776-8787. by Michelle Day, David B. Carr, Sasha Ulrich, Ema Ilijic, Tatiana Tkatch, D. James Surmeier posted to dendrite excitabilite hcn irk normalisation by pgastrein on 2005-10-05 08:31:03 as along with 2 people tarokiritani shoshin
	Distance-dependent scaling of calcium transients evoked by backpropagating spikes and synaptic activity in dendrites of hippocampal interneurons. [My Copy] J Neurosci, Vol. 24, No. 3. (21 January 2004), pp. 661-670. by B. Rozsa, T. Zelles, E. S. Vizi, B. Lendvai posted to backpropagatingpa normalisation plasticity by pgastrein on 2005-09-13 13:58:07 as along with 1 person Dax42
	Rebuilding dendritic democracy. Focus on "equalization of synaptic efficacy by activity- and timing-dependent synaptic plasticity". [My Copy] J Neurophysiol, Vol. 91, No. 5. (May 2004), pp. 1941-1942. by A. Roth, M. London posted to dendrite normalisation plasticity synapse by pgastrein on 2005-09-13 13:50:46 as
	Determinants of Voltage Attenuation in Neocortical Pyramidal Neuron Dendrites [My Copy] J. Neurosci., Vol. 18, No. 10. (15 May 1998), pp. 3501-3510. by Greg Stuart, Nelson Spruston posted to cortex dendrite epsp hcn model normalisation by pgastrein on 2005-09-13 11:20:26 as along with 1 person tarokiritani
	Dendritic Hyperpolarization-Activated Currents Modify the Integrative Properties of Hippocampal CA1 Pyramidal Neurons [My Copy] J. Neurosci., Vol. 18, No. 19. (1 October 1998), pp. 7613-7624. by Jeffrey C. Magee posted to dendrite distribution epsp hcn normalisation subthreshold by pgastrein on 2005-07-29 12:33:46 as along with 2 people marekrud tarokiritani
	Normalization strategies for cDNA microarrays. [My Copy] Nucleic Acids Res, Vol. 28, No. 10. (15 May 2000) by J. Schuchhardt, D. Beule, A. Malik, et al.E. Wolski, H. Eickhoff, H. Lehrach, H. Herzel posted to genomique normalisation puces_adn stat transcriptome by textoris on 2005-06-30 18:49:04 as along with 1 person talponer
	Microarray data normalization and transformation [My Copy] Nature Genetics, Vol. 32 Suppl (01 December 2002), pp. 496-501. by John Quackenbush posted to normalisation puces_adn stat transcriptome by textoris on 2005-06-28 16:41:37 as along with 9 people stharward surajitray daforerog alokm chad_davis schuylrp heliopais frohike bertelsen
	A Problem of Normal Form in Natural Deduction [My Copy] MLQ, Vol. 46, No. 1. (4 February 2000), pp. 121-124. by Jan v. von Plato posted to deduction natural normalisation pnc prooftheory by greg_restall on 2005-04-19 12:11:52 as
	Interaction Net Implementation of Additive and Multiplicative Structures [My Copy] Journal of Logic and Computation, Vol. 15, No. 2. (April 2005), pp. 219-237. by Ian Mackie posted to interaction lambda logic net normalisation term by greg_restall on 2005-04-08 00:44:14 as
	Identity of Proofs Based on Normalization and Generality [My Copy] The Bulletin of Symbolic Logic, Vol. 9, No. 4. (2003), pp. 477-503. by Kosta Dosen posted to logic normalisation pnc prooftheory by greg_restall on 2005-03-16 11:05:25 as along with 2 people and 1 group rzach yoriyuki LogicPhilMath
	Natural Deduction and Weak Normalization for Full Linear Logic [My Copy] Logic Journal of the IGPL, Vol. 12, No. 6. (November 2004), 601. by Lilia R. Martins, Ana T. Martins posted to deduction linear logic natural normalisation by greg_restall on 2005-03-12 06:50:43 as

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microarray	16
tiling	8
gene-expression	6
analysis	5
array	4
dendrite	4
epsp	4
hcn	4
hybridisation	4
meta	4
pnc	4
statistics	4
study	4
arrays	3
deduction	3
expressed	3
gene	3
logic	3
natural	3
sequence	3
term	3
111111111	2
2	2
adjustment	2
application	2
boutique	2
calibration	2
cnvbook	2
colour	2
comments	2
cross	2
data	2
differential	2
distribution	2
enhance	2
expression	2
high	2
inter	2
massspec	2
metabolomics	2
microrray	2
mining	2
modular	2
plasticity	2
prediction	2
probes	2
prooftheory	2
proportion	2
puces_adn	2
qrtpcr	2
ratio	2
real	2
rt-pcr	2
scheme	2
stat	2
techniques	2
time	2
transcriptome	2
two	2
unprinted	2
unread	2
web	2
wise	2
cancer	1
cgh	1
classical	1
classification	1
cnv	1
cortex	1
couche5	1
data-fusion	1
description	1
evaluation	1
excitabilite	1
expressiondata	1
fitting-method	1
genes	1
genomique	1
information-retrieval	1
interaction	1
ir	1
irk	1
isotopes-du-plomb	1
journal	1
linear	1
logics	1
microarrays	1
mirna	1
modified	1
naturaldeduction	1
normalization	1
ontology	1
partitioning	1
pyramidal	1
software	1
solexa	1
subthreshold	1
uncountable	1
variable	1
variance	1

Tag normalisation [47 articles] Export

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