Tag pathways [at least 200 articles] Export

Recent papers classified by the tag pathways.

	A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2787-2794. by Andreas Keller, Christina Backes, Andreas Gerasch, et al.Michael Kaufmann, Oliver Kohlbacher, Eckart Meese, Hans-Peter Lenhof posted to pathways gene-set-analysis gene-expression dynamic-programming differential algorithm by bertelsen on 2009-11-25 13:58:28 as along with 9 people and 1 group jperkins tonamswish heliopais dolchan greg zufar rdiaz ptrobajo brianb Orengo Group Journal Picks
	Genome sequence of Haloarcula marismortui: A halophilic archaeon from the Dead Sea [My Copy] Genome Research, Vol. 14, No. 11. (1 November 2004), pp. 2221-2234. by Nitin S. Baliga, Richard Bonneau, Marc T. Facciotti, et al.Min Pan, Gustavo Glusman, Eric W. Deutsch, Paul Shannon, Yulun Chiu, Rueyhung S. Weng, Rueichi R. Gan, Pingliang Hung, Shailesh V. Date, Edward Marcotte, Leroy Hood, Wailap V. Ng posted to pathways halophile environmental_response dead_sea archaeon by ajsferreira on 2009-11-25 09:38:56 as along with 2 people wxg119 svdate
	Invited Review: Oxidation of Biological Systems: Oxidative Stress Phenomena, Antioxidants, Redox Reactions, and Methods for Their Quantification [My Copy] Toxicol Pathol, Vol. 30, No. 6. (1 October 2002), pp. 620-650. by Ron Kohen, Abraham Nyska posted to review pathways oxidative-stress by Zephyrus on 2009-11-25 09:13:06 as
	Cytokines sing the blues: inflammation and the pathogenesis of depression. [My Copy] Trends in immunology, Vol. 27, No. 1. (January 2006), pp. 24-31. by Charles L. Raison, Lucile Capuron, Andrew H. Miller posted to pathways inflammation depression cytokine by sophiebostock on 2009-11-20 11:03:59 as along with 2 people romanUCL ajw
	Models and computational strategies linking physiological response to molecular networks from large-scale data. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 366, No. 1878. (13 September 2008), pp. 3067-3089. by Fernando Ortega, Katrin Sameith, Nil Turan, et al.Russell Compton, Victor Trevino, Marina Vannucci, Francesco Falciani posted to systems-biology review physiology pathways networks multi-scale molecular modularity models integration complexity by bertelsen on 2009-11-18 20:26:07 as along with 2 people aviad_work cswinburne
	Dual folding pathways of an alpha/beta protein from all-atom ab initio folding simulations. [My Copy] The Journal of chemical physics, Vol. 131, No. 16. (28 October 2009) by Hongxing Lei, Zhi-Xiang X. Wang, Chun Wu, Yong Duan posted to protein_structure pathways folding energy_function all_atom ab_initio by melo_mcr on 2009-11-18 12:58:16 as
	KEGG Atlas mapping for global analysis of metabolic pathways. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008), gkn282. by Shujiro Okuda, Takuji Yamada, Masami Hamajima, et al.Masumi Itoh, Toshiaki Katayama, Peer Bork, Susumu Goto, Minoru Kanehisa posted to pathways genomic annotation by Thaverkamp on 2009-11-18 09:26:50 as along with 6 people chica epigenetics michaelbarton reyez renatomilani guhjy
	Algorithms for effective querying of compound graph-based pathway databases [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 376. by Ugur Dogrusoz, Ahmet Cetintas, Emek Demir, Ozgun Babur posted to these pathways network by calderonv on 2009-11-17 09:40:54 as along with 3 people poirel operon dullhunk
	Service-based analysis of biological pathways [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 10. (2009), S6. by George Zheng, Athman Bouguettaya posted to web_service soap pathways data-mining analysis by neils on 2009-11-15 23:42:32 as along with 2 people kshameer druvus
	Perigenual anterior cingulate morphology covaries with perceived social standing. [My Copy] Social cognitive and affective neuroscience, Vol. 2, No. 3. (September 2007), pp. 161-173. by Peter J. Gianaros, Jeffrey A. Horenstein, Sheldon Cohen, et al.Karen A. Matthews, Sarah M. Brown, Janine D. Flory, Hugo D. Critchley, Stephen B. Manuck, Ahmad R. Hariri posted to stress status socioeconomic pathways morphology markers chronic brain by sophiebostock on 2009-11-12 10:35:30 as
	Do biomarkers of stress mediate the relation between socioeconomic status and health? [My Copy] Journal of epidemiology and community health, Vol. 60, No. 7. (July 2006), pp. 633-639. by Jennifer B. Dowd, Noreen Goldman posted to stress status socioeconomic pathways markers health by sophiebostock on 2009-11-12 10:32:20 as along with 2 people ajw gareth
	Psychosocial factors in the development of coronary artery disease☆ [My Copy] Progress in Cardiovascular Diseases, Vol. 46, No. 4. (January 2004), pp. 337-347. by Philip C. Strike, Andrew Steptoe posted to review psychosocial pathways factors cvd chd by sophiebostock on 2009-11-12 10:21:22 as along with 1 person lydiapoole
	The MiST2 database: a comprehensive genomics resource on microbial signal transduction [My Copy] Nucl. Acids Res. (9 November 2009), gkp940. by Luke E. Ulrich, Igor B. Zhulin posted to transduction signal pathways microbiology genomics database by neils on 2009-11-11 22:51:07 as
	Pathway Projector: Web-Based Zoomable Pathway Browser Using KEGG Atlas and Google Maps API [My Copy] PLoS ONE, Vol. 4, No. 11. (11 November 2009), e7710. by Nobuaki Kono, Kazuharu Arakawa, Ryu Ogawa, et al.Nobuhiro Kido, Kazuki Oshita, Keita Ikegami, Satoshi Tamaki, Masaru Tomita posted to web pathways maps kegg google browser api by neils on 2009-11-11 22:48:43 as along with 3 people brianb renatomilani thomaskelder
	Epidemiology of sudden cardiac death: clinical and research implications. [My Copy] Progress in cardiovascular diseases, Vol. 51, No. 3. (c 2008), pp. 213-228. by Sumeet S. Chugh, Kyndaron Reinier, Carmen Teodorescu, et al.Audrey Evanado, Elizabeth Kehr, Mershed Al Samara, Ronald Mariani, Karen Gunson, Jonathan Jui posted to sudden socioeconomic review pathways epidemiology death cardiac by sophiebostock on 2009-11-11 14:01:04 as
	The epidemiology, pathophysiology, and management of psychosocial risk factors in cardiac practiceThe emerging field of behavioral cardiology [My Copy] Journal of the American College of Cardiology, Vol. 45, No. 5. (01 March 2005), pp. 637-651. by Alan Rozanski, James A. Blumenthal, Karina W. Davidson, Patrice G. Saab, Laura Kubzansky posted to risk rehabilitation psychosocial practice pathways management factors cvd chd behaviour by sophiebostock on 2009-11-11 13:53:02 as along with 1 person ajw
	Is posttraumatic stress disorder related to development of heart disease? An update. [My Copy] Cleveland Clinic journal of medicine, Vol. 76 Suppl 2 (April 2009) by Laura D. Kubzansky, Karestan C. Koenen posted to review ptsd psychosocial pathways heart cvd by sophiebostock on 2009-11-11 13:42:32 as
	Gene network reconstruction from microarray data [My Copy] BMC Proceedings, Vol. 3, No. Suppl 4. (2009), S12. by Florence Jaffrezic, Gwenola T. Klopp posted to signaling_pathways regulatory_pathways reconstruction_software pathways networks network_topology differentially_expressed_genes biological_pathways by ekotelnikova on 2009-11-10 22:33:57 as
	GeNGe: systematic generation of gene regulatory networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 9. (1 May 2009), pp. 1205-1207. by Hendrik Hache, Christoph Wierling, Hans Lehrach, Ralf Herwig posted to pathways networks network_topology gene_regulatory_networks gene_network by ekotelnikova on 2009-11-10 22:31:25 as along with 7 people ptrobajo sotacam reyez tonamswish TRHvidsten rdiaz guhjy
	Reconstruct modular phenotype-specific gene networks by knowledge-driven matrix factorization. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 17. (1 September 2009), pp. 2236-2243. by Xuerui Yang, Yang Zhou, Rong Jin, Christina Chan posted to systems_biology regulatory_pathways pathways networks network_topology microarray_data gene_networks gene_expression_data co-expression algorithm_developers by ekotelnikova on 2009-11-10 11:25:34 as along with 2 people ptrobajo guhjy
	Biological Network Inference and analysis using SEBINI and CABIN. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 541 (2009), pp. 551-576. by Ronald Taylor, Mudita Singhal posted to systems_biology pathways networks microarray_data algorithm_developers by ekotelnikova on 2009-11-10 11:17:40 as along with 3 people guhjy irenas bertelsen
	Elucidation of functional consequences of signalling pathway interactions [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 370. by Adaoha Ihekwaba, Phuong Nguyen, Corrado Priami posted to these pathways network by calderonv on 2009-11-10 09:09:38 as along with 4 people and 1 group sillitoe karthikraman colmryan renatomilani Orengo Group Journal Picks
	Sympathoadrenal Stress Reactivity Is a Predictor of Future Blood Pressure: An 18-Year Follow-Up Study [My Copy] Hypertension, Vol. 52, No. 2. (1 August 2008), pp. 336-341. by Arnljot Flaa, Ivar K. Eide, Sverre E. Kjeldsen, Morten Rostrup posted to sympathetic stress reactivity pressure predict pathways longitudinal hypertension blood by sophiebostock on 2009-11-09 11:50:35 as along with 1 person ajw
	Psychophysiological Stress Reactivity and Hypertension [My Copy] Hypertension, Vol. 52, No. 2. (1 August 2008), pp. 220-221. by Andrew Steptoe posted to stress reactivity psychobiology pressure pathways hypertension editorial blood by sophiebostock on 2009-11-09 11:45:15 as
	Why do we respond so differently? Reviewing determinants of human salivary cortisol responses to challenge [My Copy] Psychoneuroendocrinology, Vol. 34, No. 1. (January 2009), pp. 2-18. by B. Kudielka, D. Hellhammer, S. Wust posted to stress review pathways cortisol by sophiebostock on 2009-11-06 17:00:13 as along with 3 people romanUCL ajw gareth
	Positive Affect and Psychobiological Processes Relevant to Health [My Copy] Journal of Personality, Vol. 9999, No. 9999. (30 September 2009) by Andrew Steptoe, Samantha Dockray, Jane Wardle posted to psychobiology positive pathways affect by sophiebostock on 2009-11-06 16:31:26 as
	Do Depression and Anxiety Mediate the Link Between Educational Attainment and CHD? [My Copy] Psychosom Med, Vol. 68, No. 1. (1 January 2006), pp. 25-32. by Rebecca C. Thurston, Laura D. Kubzansky, Ichiro Kawachi, Lisa F. Berkman posted to status socioeconomic pathways education depression cvd chd anxiety by sophiebostock on 2009-11-06 15:28:44 as
	Integration of chemical-genetic and genetic interaction data links bioactive compounds to cellular target pathways [My Copy] Nature Biotechnology, Vol. 22, No. 1. (07 December 2003), pp. 62-69. by Ainslie B. Parsons, Renee L. Brost, Huiming Ding, et al.Zhijian Li, Chaoying Zhang, Bilal Sheikh, Grant W. Brown, Patricia M. Kane, Timothy R. Hughes, Charles Boone posted to yeast pathways high_throughput by mtaschuk on 2009-11-06 13:01:06 as along with 3 people and 1 group nickluscombe koller marck EBI-regulation
	Thalamic relay functions and their role in corticocortical communication: generalizations from the visual system. [My Copy] Neuron, Vol. 33, No. 2. (17 January 2002), pp. 163-175. by R. W. Guillery, S. M. Sherman posted to thalamic_inputs relays pathways generalizations cortical_areas axons by kostasl on 2009-11-06 10:00:25 as along with 1 person sylvain_chevallier
	Extraction of phylogenetic network modules from the metabolic network [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 130. by Takuji Yamada, Minoru Kanehisa, Susumu Goto posted to these pathways network by calderonv on 2009-11-05 13:34:12 as along with 1 person and 1 group adampah Bioinformatics
	Discovery of uncharacterized cellular systems by genome-wide analysis of functional linkages [My Copy] Nature Biotechnology, Vol. 21, No. 9. (17 August 2003), pp. 1055-1062. by Shailesh V. Date, Edward M. Marcotte posted to these pathways method by calderonv on 2009-11-05 11:41:41 as along with 4 people shung tmmurali balajis svdate
	Distinguishing between smooth and rough free energy barriers in protein folding [My Copy] Biochemistry, Vol. 0, No. ja. (0000) by Stefano Gianni, Maurizio Brunori, Per Jemth, Mikael Oliveberg, Mingjie Zhang posted to transition_states transition_state protein_stability pathways globular_proteins free_energy energy_barriers chevron by samcho on 2009-11-02 19:49:30 as
	Identifying differential correlation in gene/pathway combinations [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (18 November 2008), 488. by Rosemary Braun, Leslie Cope, Giovanni Parmigiani posted to pathways expression differential correlation by dolchan on 2009-10-29 17:04:54 as along with 11 people dipenps zufar jfr shikin mdstobbe imina rdiaz renatomilani lptolik barriot ptrobajo
	Comprehensive genomic characterization defines human glioblastoma genes and core pathways [My Copy] Nature, Vol. 455, No. 7216. (04 September 2008), pp. 1061-1068. posted to pathways glioblastoma gbm cancer by dolchan on 2009-10-29 17:04:09 as along with 24 people and 2 groups ealloza iskathy srp33 ajbattle aezrin myzhang chrisamiller fenghezi jessopher jfr zufar wimufi jbhiatt frohike huiminC renatomilani ptrobajo cchand Zephyrus nuin brianb oelemento shikin shigepong Roswell Cancer Crosstalk GeneGo
	Subgroup Differences in the Modus Operandi of Adolescent Sexual Offenders [My Copy] Child Maltreat, Vol. 1, No. 1. (1 February 1996), pp. 17-24. by Keith L. Kaufman, Daniel R. Hilliker, Eric L. Daleiden posted to sex pathways offenders by bgockel on 2009-10-28 17:20:42 as
	Simple Energy Landscape Model for the Kinetics of Functional Transitions in Proteins [My Copy] The Journal of Physical Chemistry B, Vol. 109, No. 5. (1 February 2005), pp. 1959-1969. by Osamu Miyashita, Peter G. Wolynes, Jose N. Onuchic posted to pathways kinetics energy_landscape dynamics conformational_changes active-state activation by xdeupi on 2009-10-28 12:45:14 as along with 2 people abovell aqeel
	Cell Cycle Regulators in the Neuronal Death Pathway of Amyotrophic Lateral Sclerosis Caused by Mutant Superoxide Dismutase 1 [My Copy] J. Neurosci., Vol. 23, No. 6. (15 March 2003), pp. 2131-2140. by Minh D. Nguyen, Mathieu Boudreau, Jasna Kriz, Sebastien Couillard-Despres, David R. Kaplan, Jean-Pierre Julien posted to sod1 sclerosis pathways neurological_diseases neurological_disease neural_system motor_neuron_disease lateral cyclin_dependent_kinase amyotrophic_lateral_sclerosis amyotrophic als by ekotelnikova on 2009-10-28 10:21:54 as
	Neural system-enriched gene expression: relationship to biological pathways and neurological diseases [My Copy] Physiol. Genomics, Vol. 18, No. 2. (8 July 2004), pp. 167-183. by Jianhua Zhang, Amy Moseley, Anil G. Jegga, et al.Ashima Gupta, David P. Witte, Maureen Sartor, Mario Medvedovic, Sarah S. Williams, Cathy Ley-Ebert, Lique M. Coolen, Gregory Egnaczyk, Mary B. Genter, Michael Lehman, Jerry Lingrel, John Maggio, Linda Parysek, Ryan Walsh, Ming Xu, Bruce J. Aronow posted to systems_biology signaling_pathways regulatory_pathways pathways neurological_diseases neurological_disease neural_system nervous_tissues nervous_system_differentiation motor_neuron_disease microarray_data gene_expression_profiles gene_expression_database amyotrophic_lateral_sclerosis alzheimer als by ekotelnikova on 2009-10-19 15:26:06 as
	Do pathways lead to better organized care processes? [My Copy] Journal of evaluation in clinical practice, Vol. 15, No. 5. (October 2009), pp. 782-788. by Kris Vanhaecht, Karel De Witte, Massimiliano Panella, Walter Sermeus posted to pathways by wilvc on 2009-10-14 06:33:27 as
	Metabolic pathways of clostridia for producing butanol [My Copy] Biotechnology Advances, Vol. 27, No. 6. (16 November 2009), pp. 764-781. by R. Gheshlaghi, J. M. Scharer, M. Moo-Young, C. P. Chou posted to pathways metabolic clostridia butanol by crgGTL on 2009-10-12 15:04:41 as along with 1 person Winzer
	Inhibition of MLK3-MKK4/7-JNK1/2 pathway by Akt1 in exogenous estrogen-induced neuroprotection against transient global cerebral ischemia by a non-genomic mechanism in male rats. [My Copy] Journal of neurochemistry, Vol. 99, No. 6. (December 2006), pp. 1543-1554. by Ran Wang, Quan-Guang G. Zhang, Dong Han, Jing Xu, Qian Lü, Guang-Yi Y. Zhang posted to signaling_pathways pathways by ekotelnikova on 2009-10-08 16:02:08 as
	Activation of the estrogen receptor through phosphorylation by mitogen-activated protein kinase. [My Copy] Science (New York, N.Y.), Vol. 270, No. 5241. (1 December 1995), pp. 1491-1494. by S. Kato, H. Endoh, Y. Masuhiro, et al.T. Kitamoto, S. Uchiyama, H. Sasaki, S. Masushige, Y. Gotoh, E. Nishida, H. Kawashima, D. Metzger, P. Chambon posted to signaling_pathways pathways by ekotelnikova on 2009-10-08 16:01:13 as
	Activation of the unliganded estrogen receptor by EGF involves the MAP kinase pathway and direct phosphorylation. [My Copy] The EMBO journal, Vol. 15, No. 9. (1 May 1996), pp. 2174-2183. by G. Bunone, P. A. Briand, R. J. Miksicek, D. Picard posted to signaling_pathways pathways glioblastoma by ekotelnikova on 2009-10-08 15:59:48 as
	Diosgenin induces hypoxia-inducible factor-1 activation and angiogenesis through estrogen receptor-related phosphatidylinositol 3-kinase/Akt and p38 mitogen-activated protein kinase pathways in osteoblasts. [My Copy] Molecular pharmacology, Vol. 68, No. 4. (October 2005), pp. 1061-1073. by Men Luh L. Yen, Jen Liang L. Su, Chung Liang L. Chien, et al.Kuang Wen W. Tseng, Ching Yao Y. Yang, Wei Fang F. Chen, Chiao Chia C. Chang, Min Liang L. Kuo posted to pathways glioblastoma by ekotelnikova on 2009-10-08 15:58:15 as
	Mechanisms of hypoxic gene regulation of angiogenesis factor Cyr61 in melanoma cells. [My Copy] The Journal of biological chemistry, Vol. 278, No. 46. (14 November 2003), pp. 45651-45660. by Manfred Kunz, Steffen Moeller, Dirk Koczan, et al.Peter Lorenz, Roland H. Wenger, Michael O. Glocker, Hans-Juergen J. Thiesen, Gerd Gross, Saleh M. Ibrahim posted to pathways glioblastoma by ekotelnikova on 2009-10-08 15:51:32 as
	Cyr61 protects against hyperoxia-induced cell death via Akt pathway in pulmonary epithelial cells. [My Copy] American journal of respiratory cell and molecular biology, Vol. 33, No. 3. (September 2005), pp. 297-302. by Yang Jin, Hong Pyo P. Kim, Emeka Ifedigbo, Lester F. Lau, Augustine M. Choi posted to signaling_pathways pathways glioblastoma angiogenesis by ekotelnikova on 2009-10-08 15:49:10 as
	Genetic pathways to glioblastomas. [My Copy] Neuropathology : official journal of the Japanese Society of Neuropathology, Vol. 25, No. 1. (March 2005), pp. 1-7. by Hiroko Ohgaki posted to pathways glioblastoma by ekotelnikova on 2009-10-08 15:39:36 as along with 1 person monimonicas
	Targeting malignant glioma survival signalling to improve clinical outcomes [My Copy] Journal of Clinical Neuroscience, Vol. 14, No. 4. (April 2007), pp. 301-308. by M. Wong, A. Kaye, C. Hovens posted to pathways growth_factors combination_therapy by ekotelnikova on 2009-10-08 15:30:56 as along with 1 person and 1 group loopback007 Cancer_Stem_Cells
	P bodies: at the crossroads of post-transcriptional pathways [My Copy] Nature Reviews Molecular Cell Biology, Vol. 8, No. 1. (01 January 2007), pp. 9-22. by Ana Eulalio, Isabelle Behm-Ansmant, Elisa Izaurralde posted to review regulation post-transcriptional pathways p-bodies mrna localization gene-expression cytoplasmic cell-biology by bertelsen on 2009-10-07 23:24:55 as along with 3 people and 2 groups xico margaritis lzhonsailing Neuroscience WetBiology
	Exploring Molecular Mechanisms of Ligand Recognition by Opioid Receptors with Metadynamics. [My Copy] Biochemistry (28 September 2009) by Davide Provasi, Andrea Bortolato, Marta Filizola posted to pathways md binding_kinetics binding by xdeupi on 2009-10-06 19:30:24 as

Note: You may cite this page as: http://www.citeulike.org/tag/pathways

Result page: 1 2 3 4 5 6 7 8 9 Next

review	46
networks	43
database	39
cancer	38
metabolic	27
evolution	26
network	21
metabolism	19
gene-expression	18
sysbio	18
wikipathways	18
microarray	16
signaling	16
bioinformatics	15
alignment	14
software	14
systems-biology	14
visualization	14
analysis	13
disease	13
expression	13
algorithm	12
biology	12
pathway	12
prediction	12
biochemical	11
drosophila	11
innate_immunity	11
integration	11
simulation	11
standards	11
model	10
phenotype	10
bacteria	9
biological-pathways	9
genome	9
tool	9
data	8
genes	8
genomics	8
glioblastoma	8
modelling	8
phenotypes	8
protein	8
regulation	8
stress	8
computational	7
cytoscape	7
databases	7
enzyme	7
gene	7
genotype	7
genotype-phenotype	7
history	7
inflammation	7
models	7
pathwayanalysis	7
sbml	7
signaling_pathways	7
systems	7
wiki	7
biological-network	6
breast	6
community	6
differential	6
drug-discovery	6
drug-target	6
dynamic	6
identification	6
imd	6
jak-stat	6
modularity	6
molecular	6
paramestim	6
structure	6
systems_biology	6
toll	6
visual	6
bind	5
cancer-crosstalk	5
data-mining	5
drug	5
fungi	5
glycolysis	5
graph	5
host-pathogen	5
immune	5
immune-response	5
inflammtion	5
insect	5
interaction	5
interactions	5
kegg	5
mapk	5
microarrays	5
ontology	5
parasites	5
therapy	5
vision	5
yeast	5

Tag pathways [at least 200 articles] Export

Related Tags