Tag pdz [98 articles] Export

Recent papers classified by the tag pdz.

	The prevalence and significance of PDZ domain-phosphoinositide interactions. [My Copy] Biochimica et biophysica acta, Vol. 1761, No. 8. (August 2006), pp. 947-956. by Pascale Zimmermann posted to pi pdz by guhjy on 2009-11-28 09:23:30 as
	CIP98, a novel PDZ domain protein, is expressed in the central nervous system and interacts with calmodulin-dependent serine kinase. [My Copy] Journal of neurochemistry, Vol. 85, No. 1. (April 2003), pp. 123-134. by Chan Choo C. Yap, Fengyi Liang, Yasuhiro Yamazaki, et al.Yuko Muto, Haruo Kishida, Tsuyako Hayashida, Tsutomu Hashikawa, Ryoji Yano posted to protocol pdz membrane cip98 calmodulin by imelda on 2009-10-16 10:48:49 as
	Identification of specificity and promiscuity of PDZ domain interactions through their dynamic behavior [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2009), NA. by Z. Nevin Gerek, Ozlem Keskin, S. Banu Ozkan posted to domain dynamics pdz peptide specificity by neils on 2009-07-10 01:21:31 as
	A Specificity Map for the PDZ Domain Family [My Copy] PLoS Biology, Vol. 6, No. 9. (1 September 2008), e239. by Raffi Tonikian, Yingnan Zhang, Stephen L. Sazinsky, et al.Bridget Currell, Jung-Hua Yeh, Boris Reva, Heike A. Held, Brent A. Appleton, Marie Evangelista, Yan Wu, Xiaofeng Xin, Andrew C. Chan, Somasekar Seshagiri, Laurence A. Lasky, Chris Sander, Charles Boone, Gary D. Bader, Sachdev S. Sidhu posted to domains pdz post-defense predictions by kgutwin on 2009-05-20 05:37:28 as along with 6 people and 3 groups balicea grahamc markchen zwang cabbagesofdoom barry structural_bioinformatics McCammon Bioinformatics
	Quantification of PDZ domain specificity, prediction of ligand affinity and rational design of super-binding peptides. [My Copy] Journal of molecular biology, Vol. 343, No. 3. (22 October 2004), pp. 703-718. by U. Wiedemann, P. Boisguerin, R. Leben, et al.D. Leitner, G. Krause, K. Moelling, R. Volkmer-Engert, H. Oschkinat posted to domains pdz post-defense predictions spot-array by kgutwin on 2009-05-20 05:37:05 as
	PDZ domain proteins: Scaffolds for signaling complexes [My Copy] Current Biology, Vol. 7, No. 12. (01 December 1997), pp. R770-R773. by Rama Ranganathan, Elliott M. Ross posted to domains pdz post-defense by kgutwin on 2009-05-20 05:32:04 as
	Graphical models of protein-protein interaction specificity from correlated mutations and interaction data [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 76, No. 4. (2 February 2009), pp. 911-929. by John Thomas, Naren Ramakrishnan, Chris Bailey-Kellogg posted to correlated_mutations pdz protein_protein by barry on 2009-03-25 21:58:54 as along with 5 people and 2 groups dfdong sobolevnrm AliC qluo RebeccaHamer Orengo Group Journal Picks baker-group
	Signaling pathways of PDZ2 domain: A molecular dynamics interaction correlation analysis [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 74, No. 1. (2009), pp. 145-154. by Yifei Kong, Martin Karplus posted to allosteric md_simulation pdz by barry on 2009-01-23 03:40:22 as along with 1 person and 1 group jmccammon McCammon
	Predicting PDZ domain–peptide interactions from primary sequences [My Copy] Nature Biotechnology, Vol. 26, No. 9. (17 August 2008), pp. 1041-1045. by Jiunn R. Chen, Bryan H. Chang, John E. Allen, Michael A. Stiffler, Gavin Macbeath posted to computational pdz peptides prediction specificity by Evangelia on 2008-12-18 16:09:26 as along with 5 people yzlab phoenixzxl guhjy cabbagesofdoom zwang
	Ligand-dependent Dynamics and Intramolecular Signaling in a PDZ Domain [My Copy] Journal of Molecular Biology, Vol. 335, No. 4. (23 January 2004), pp. 1105-1115. by E. Fuentes posted to nmr pdz by barry on 2008-12-05 00:29:08 as
	Organization of signaling complexes by PDZ-domain scaffold proteins. [My Copy] Accounts of chemical research, Vol. 36, No. 7. (July 2003), pp. 530-538. by Mingjie Zhang, Wenning Wang posted to scaffold pdz by guhjy on 2008-09-10 09:55:06 as
	Protein/protein interactions (PDZ) in proximal tubules. [My Copy] The Journal of membrane biology, Vol. 203, No. 3. (February 2005), pp. 111-118. by J. Biber, S. M. Gisler, N. Hernando, H. Murer posted to pdz pt by guhjy on 2008-09-10 09:53:13 as
	PDZ-containing proteins: alternative splicing as a source of functional diversity. [My Copy] Brain research. Brain research reviews, Vol. 47, No. 1-3. (December 2004), pp. 105-115. by J. Sierralta, C. Mendoza posted to pdz splicing by guhjy on 2008-09-10 09:52:44 as
	A PDZ switch for a cellular stress response. [My Copy] Cell, Vol. 117, No. 4. (14 May 2004), pp. 417-419. by C. Schlieker, A. Mogk, B. Bukau posted to pdz stress by guhjy on 2008-09-10 09:52:24 as
	Regulation of ion transport by the NHERF family of PDZ proteins. [My Copy] Physiology (Bethesda, Md.), Vol. 19 (December 2004), pp. 362-369. by S. Shenolikar, J. W. Voltz, R. Cunningham, E. J. Weinman posted to pdz by guhjy on 2008-09-10 09:52:06 as
	PDZ interactions and proximal tubular phosphate reabsorption. [My Copy] American journal of physiology. Renal physiology, Vol. 287, No. 5. (November 2004) by J. Biber, S. M. Gisler, N. Hernando, C. A. Wagner, H. Murer posted to pdz pt by guhjy on 2008-09-10 09:51:53 as
	PDZ proteins and proximal ion transport. [My Copy] Current opinion in nephrology and hypertension, Vol. 13, No. 5. (September 2004), pp. 569-574. by N. Hernando, C. A. Wagner, S. M. Gisler, J. Biber, H. Murer posted to pdz pt by guhjy on 2008-09-10 09:51:43 as
	A PDZ-Binding Motif Controls Basolateral Targeting of Syndecan-1 Along the Biosynthetic Pathway in Polarized Epithelial Cells. [My Copy] Traffic (Copenhagen, Denmark) (30 July 2008) by Sandra Maday, Eric Anderson, Henry C C. Chang, et al.James Shorter, Ayano Satoh, Jeff Sfakianos, Heike Fölsch, James M M. Anderson, Zenta Walther, Ira Mellman posted to pdz pt by guhjy on 2008-09-10 09:46:25 as
	Role of SLC xenobiotic transporters and their regulatory mechanisms PDZ proteins in drug delivery and disposition. [My Copy] Journal of controlled release : official journal of the Controlled Release Society, Vol. 116, No. 2. (28 November 2006), pp. 238-246. by T. Sugiura, Y. Kato, A. Tsuji posted to slc pdz by guhjy on 2008-09-10 09:41:40 as
	Regulation of drug transporters by PDZ adaptor proteins and nuclear receptors. [My Copy] European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences, Vol. 27, No. 5. (April 2006), pp. 487-500. by Y. Kato, C. Watanabe, A. Tsuji posted to pdz by guhjy on 2008-09-10 09:40:51 as
	PDZ and LIM domain-encoding genes: molecular interactions and their role in development. [My Copy] TheScientificWorldJournal, Vol. 7 (2007), pp. 1470-1492. by A. J. te Velthuis, C. P. Bagowski posted to pdz by guhjy on 2008-09-10 09:35:28 as
	Therapeutic use of PDZ protein-protein interaction antagonism. [My Copy] Drug news & perspectives, Vol. 21, No. 3. (April 2008), pp. 137-141. by N. X. Wang, H. J. Lee, J. J. Zheng posted to inhibitor pdz by guhjy on 2008-08-18 14:31:30 as along with 1 person higueruelo
	Making protein interactions druggable: targeting PDZ domains. [My Copy] Nat Rev Drug Discov, Vol. 3, No. 12. (December 2004), pp. 1047-1056. by K. K. Dev posted to pdz by guhjy on 2008-08-18 14:21:31 as along with 1 person mdimmic
	Role of PDZ domain-containing proteins and ERM proteins in regulation of renal function and dysfunction. [My Copy] Journal of the American Society of Nephrology : JASN, Vol. 14, No. 7. (July 2003), pp. 1949-1951. by M. Levi posted to erm pdz pt by guhjy on 2008-08-18 14:18:47 as
	Xenobiotic transporter-adaptor network. [My Copy] Drug metabolism and pharmacokinetics, Vol. 22, No. 6. (December 2007), pp. 401-408. by Y. Kato posted to pdz pt by guhjy on 2008-08-18 14:02:37 as
	PDZ proteins retain and regulate membrane transporters in polarized epithelial cell membranes. [My Copy] Am J Physiol Cell Physiol, Vol. 288, No. 1. (January 2005) by B. Brône, J. Eggermont posted to pdz pt sorting by guhjy on 2008-08-18 13:58:44 as
	The apical compartment: trafficking pathways, regulators and scaffolding proteins. [My Copy] Curr Opin Cell Biol, Vol. 15, No. 4. (August 2003), pp. 423-429. by Y. Altschuler, C. Hodson, S. L. Milgram posted to pdz pt sorting by guhjy on 2008-08-18 13:43:43 as
	Urine electrolyte, mineral, and protein excretion in NHERF-2 and NHERF-1 null mice. [My Copy] American journal of physiology. Renal physiology, Vol. 294, No. 4. (April 2008) by R. Cunningham, A. Esmaili, E. Brown, et al.R. S. Biswas, R. Murtazina, M. Donowitz, H. B. Dijkman, J. van der Vlag, B. M. Hogema, H. R. De Jonge, S. Shenolikar, J. B. Wade, E. J. Weinman posted to knockout mouse pdz urate-transporter by guhjy on 2008-08-18 13:34:36 as
	Longitudinal study of urinary excretion of phosphate, calcium, and uric acid in mutant NHERF-1 null mice. [My Copy] American journal of physiology. Renal physiology, Vol. 290, No. 4. (April 2006) by E. J. Weinman, V. Mohanlal, N. Stoycheff, et al.F. Wang, D. Steplock, S. Shenolikar, R. Cunningham posted to knockout mouse pdz urate-transporter by guhjy on 2008-08-18 13:31:29 as
	PDZK1: I. A major scaffolder in brush borders of proximal tubular cells1 [My Copy] Kidney Int, Vol. 64, No. 5. (November 2003), pp. 1733-1745. by Serge M. Gisler, Sandra Pribanic, Desa Bacic, et al.Patrik Forrer, Andrea Gantenbein, Luc A. Sabourin, Akira Tsuji, Zhuo-Shen Zhao, Edward Manser, Jurg Biber, Heini Murer posted to oat pdz pt by guhjy on 2008-08-18 13:25:25 as
	Comparison of the interaction of human organic anion transporter hOAT4 with PDZ proteins between kidney cells and placental cells. [My Copy] Pharmaceutical research, Vol. 25, No. 2. (February 2008), pp. 475-480. by F. Zhou, W. Xu, K. Tanaka, G. You posted to oat pdz llcpk1 by guhjy on 2008-08-16 06:30:55 as
	PDZBase: a protein-protein interaction database for PDZ-domains. [My Copy] Bioinformatics, Vol. 21, No. 6. (March 2005), pp. 827-828. by T. Beuming, L. Skrabanek, M. Y. Niv, P. Mukherjee, H. Weinstein posted to pdz ppi by guhjy on 2008-08-14 13:38:07 as along with 3 people and 1 group flbarroso pdelosri IrinaMoreira EPFL_SB_ITP_LBS
	Recognition of unique carboxyl-terminal motifs by distinct PDZ domains. [My Copy] Science, Vol. 275, No. 5296. (3 January 1997), pp. 73-77. by Z. Songyang, A. S. Fanning, C. Fu, et al.J. Xu, S. M. Marfatia, A. H. Chishti, A. Crompton, A. C. Chan, J. M. Anderson, L. C. Cantley posted to pdz recycling by tkershaw on 2008-08-01 13:48:53 as along with 1 person and 1 group pdelosri EPFL_SB_ITP_LBS
	Crystal Structures of a Complexed and Peptide-Free Membrane Protein-Binding Domain: Molecular Basis of Peptide Recognition by PDZ [My Copy] Cell, Vol. 85, No. 7. (28 June 1996), pp. 1067-1076. by Declan A. Doyle, Alice Lee, John Lewis, Eunjoon Kim, Morgan Sheng, Roderick Mackinnon posted to pdz recycling by tkershaw on 2008-08-01 13:48:27 as
	GIPC Binds to the Human Lutropin Receptor (hLHR) through an Unusual PDZ Domain Binding Motif, and It Regulates the Sorting of the Internalized Human Choriogonadotropin and the Density of Cell Surface hLHR [My Copy] J. Biol. Chem., Vol. 278, No. 49. (5 December 2003), pp. 49348-49357. by Takashi Hirakawa, Colette Galet, Mikiko Kishi, Mario Ascoli posted to pdz recycling by tkershaw on 2008-08-01 11:04:46 as
	Identification of a Novel Endocytic Recycling Signal in the D1 Dopamine Receptor [My Copy] J. Biol. Chem., Vol. 279, No. 36. (3 September 2004), pp. 37461-37469. by Gabriel A. Vargas, Mark von Zastrow posted to pdz recycling by tkershaw on 2008-08-01 11:03:46 as
	kappa Opioid Receptor Interacts with Na+/H+-exchanger Regulatory Factor-1/Ezrin-Radixin-Moesin-binding Phosphoprotein-50 (NHERF-1/EBP50) to Stimulate Na+/H+ Exchange Independent of Gi/Go Proteins [My Copy] J. Biol. Chem., Vol. 279, No. 24. (11 June 2004), pp. 25002-25009. by Peng Huang, Deborah Steplock, Edward J. Weinman, et al.Randy A. Hall, Zhe Ding, Jianguo Li, Yulin Wang, Lee-Yuan Liu-Chen posted to pdz recycling by tkershaw on 2008-08-01 11:02:29 as
	Ezrin-Radixin-Moesin-binding Phosphoprotein-50/Na+/H+ Exchanger Regulatory Factor (EBP50/NHERF) Blocks U50,488H-induced Down-regulation of the Human kappa Opioid Receptor by Enhancing Its Recycling Rate [My Copy] J. Biol. Chem., Vol. 277, No. 30. (19 July 2002), pp. 27545-27552. by Jian-Guo Li, Chongguang Chen, Lee-Yuan Liu-Chen posted to pdz recycling by tkershaw on 2008-08-01 11:01:17 as
	A Transplantable Sorting Signal That Is Sufficient to Mediate Rapid Recycling of G Protein-coupled Receptors [My Copy] J. Biol. Chem., Vol. 276, No. 48. (21 November 2001), pp. 44712-44720. by Robert M. Gage, Kyung-Ah Kim, Tracy T. Cao, Mark von Zastrow posted to bar pdz recycling by tkershaw on 2008-08-01 10:58:43 as
	beta 1-Adrenergic Receptor Association with the Synaptic Scaffolding Protein Membrane-associated Guanylate Kinase Inverted-2 (MAGI-2). DIFFERENTIAL REGULATION OF RECEPTOR INTERNALIZATION BY MAGI-2 AND PSD-95 [My Copy] J. Biol. Chem., Vol. 276, No. 44. (26 October 2001), pp. 41310-41317. by Jianguo Xu, Maryse Paquet, Anthony G. Lau, Jonathan D. Wood, Christopher A. Ross, Randy A. Hall posted to bar pdz recycling by tkershaw on 2008-08-01 10:55:32 as
	beta 1-Adrenergic Receptor Association with PSD-95. INHIBITION OF RECEPTOR INTERNALIZATION AND FACILITATION OF beta 1-ADRENERGIC RECEPTOR INTERACTION WITH N-METHYL-D-ASPARTATE RECEPTORS [My Copy] J. Biol. Chem., Vol. 275, No. 49. (1 December 2000), pp. 38659-38666. by Liaoyuan A. Hu, Yuting Tang, William E. Miller, et al.Mei Cong, Anthony G. Lau, Robert J. Lefkowitz, Randy A. Hall posted to bar pdz by tkershaw on 2008-08-01 10:54:32 as
	AKAP79-mediated Targeting of the Cyclic AMP-dependent Protein Kinase to the beta1-Adrenergic Receptor Promotes Recycling and Functional Resensitization of the Receptor [My Copy] J. Biol. Chem., Vol. 281, No. 44. (3 November 2006), pp. 33537-33553. by Lidia A. Gardner, Steven J. Tavalin, April S. Goehring, John D. Scott, Suleiman W. Bahouth posted to bar pdz recycling by tkershaw on 2008-08-01 10:52:19 as
	Role of the Cyclic AMP-dependent Protein Kinase in Homologous Resensitization of the beta1-Adrenergic Receptor [My Copy] J. Biol. Chem., Vol. 279, No. 20. (14 May 2004), pp. 21135-21143. by Lidia A. Gardner, Noel M. Santos, Shannon G. Matta, Michael A. Whitt, Suleiman W. Bahouth posted to bar pdz recycling by tkershaw on 2008-08-01 10:50:58 as
	Signal transduction and endocytosis: close encounters of many kinds. [My Copy] Nature reviews. Molecular cell biology, Vol. 3, No. 8. (August 2002), pp. 600-614. by Alexander Sorkin, Mark Von Zastrow posted to pdz recycling vonzastrow by tkershaw on 2008-07-31 15:32:29 as
	A novel endocytic recycling signal that distinguishes the membrane trafficking of naturally occurring opioid receptors. [My Copy] The Journal of biological chemistry, Vol. 278, No. 46. (14 November 2003), pp. 45978-45986. by M. Tanowitz, M. von Zastrow posted to pdz von zastrow by tkershaw on 2008-06-20 11:29:27 as
	PDZ domains: structural modules for protein complex assembly. [My Copy] J Biol Chem, Vol. 277, No. 8. (22 February 2002), pp. 5699-5702. by A. Y. Hung, M. Sheng posted to ccr2b pdz review by tkershaw on 2008-06-20 11:28:23 as along with 1 person and 1 group pdelosri EPFL_SB_ITP_LBS
	Shroom expression is attenuated in pulmonary arterial hypertension. [My Copy] The European respiratory journal : official journal of the European Society for Clinical Respiratory Physiology (11 June 2008) by J Sevilla-Pérez, M Königshoff, G Kwapiszewska, et al.O V V. Amarie, W Seeger, N Weissmann, R T T. Schermuly, R E E. Morty, O Eickelberg posted to pdz by uicBioinformatics on 2008-06-17 20:15:27 as
	Sodium-hydrogen exchanger regulatory factor-1 interacts with mouse urate transporter 1 to regulate renal proximal tubule uric acid transport. [My Copy] Journal of the American Society of Nephrology : JASN, Vol. 18, No. 5. (May 2007), pp. 1419-1425. by R. Cunningham, M. Brazie, S. Kanumuru, et al.X. E, R. Biswas, F. Wang, D. Steplock, J. B. Wade, N. Anzai, H. Endou, S. Shenolikar, E. J. Weinman posted to pdz urate-transporter by guhjy on 2008-05-08 04:54:44 as
	The multivalent PDZ domain-containing protein PDZK1 regulates transport activity of renal urate-anion exchanger URAT1 via its C terminus. [My Copy] J Biol Chem, Vol. 279, No. 44. (29 October 2004), pp. 45942-45950. by N. Anzai, H. Miyazaki, R. Noshiro, et al.S. Khamdang, A. Chairoungdua, H. J. Shin, A. Enomoto, S. Sakamoto, T. Hirata, K. Tomita, Y. Kanai, H. Endou posted to pdz urate-transporter by guhjy on 2008-03-23 13:49:10 as
	PDZ domain proteins of synapses [My Copy] Nat Rev Neurosci, Vol. 5, No. 10. (October 2004), pp. 771-781. by Eunjoon Kim, Morgan Sheng posted to autoinhibition pdz review zev-class by melting on 2008-03-11 23:33:27 as along with 2 people raycay3 gurprit_raunu

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review	14
recycling	12
pt	9
bar	7
specificity	7
affinity	6
ppi	6
structure	6
surface-plasmon-resonance	6
gpcr	5
protein_protein	5
allosteric	4
domain	4
protein_structure	4
urate-transporter	4
alternatives	3
data	3
domains	3
dynamics	3
post-defense	3
protein_dynamics	3
scaffold	3
binding	2
computational	2
correlated_mutations	2
database	2
drosophila	2
electrostatics	2
epithelia	2
interactors	2
knockout	2
ltd	2
microarrays	2
mouse	2
nmdar	2
nmr	2
normal-modes	2
oat	2
par	2
phage-display	2
prediction	2
predictions	2
psd	2
psd-95	2
signaling	2
signalling	2
slim	2
sorting	2
trafficking	2
vonzastrow	2
2006	1
2007	1
2008	1
allostery	1
ampar	1
autoinhibition	1
bioinformatics	1
calmodulin	1
camkii	1
ccr2b	1
clathrin	1
coupling	1
ctmc7	1
cytoskeleton	1
d361	1
endocytosis	1
erm	1
example	1
families	1
glur2	1
glur3	1
hippocampus	1
inhibitor	1
joint_model	1
ligand_binding	1
llcpk1	1
md_simulation	1
membrane	1
molecular_dynamics	1
morphology	1
peptide	1
peptides	1
peptidomimetics	1
pi	1
pick	1
post	1
preso	1
protocol	1
sequence	1
sequence_comparison	1
sequence_model	1
splicing	1
spot-array	1
stress	1
synapses	1
systems	1
von	1
xf	1
zastrow	1
zev-class	1

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