Tag programs [74 articles] Export

Recent papers classified by the tag programs.

	Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme [My Copy] Proteins: Structure, Function, and Genetics, Vol. 30, No. 2. (1998), pp. 144-154. by Steven Hayward, Herman J. C. Berendsen posted to programs dynamic_domains by ckmyo on 2009-12-20 14:41:49 as along with 2 people and 2 groups barry nigham structural_bioinformatics Bioinformatics
	A social network perspective on the management of product development programs [My Copy] The Journal of High Technology Management Research (17 October 2009) by Jan Kratzer, Roger T. Leenders, Jo M. L. van Engelen posted to social programs product perspective network management development by derchao on 2009-11-18 13:25:30 as
	A Critical Review of Memory Stimulation Programs in Alzheimer's Disease [My Copy] J Neuropsychiatry Clin Neurosci, Vol. 15, No. 2. (1 May 2003), pp. 130-144. by Eric Grandmaison, Martine Simard posted to stimulation programs memory by amandaalders on 2009-11-03 23:55:09 as along with 1 person mattcmu
	The recognition and treatment of growth disorders A 50-year retrospective [My Copy] Annals of Human Biology, Vol. 36, No. 5. (2009), pp. 496-510. by Babette Zemel posted to programs by svw1hss on 2009-10-07 20:42:33 as
	HMM Logos for visualization of protein families. [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (21 January 2004), 7. by B. Schuster-Böckler, J. Schultz, S. Rahmann posted to programs hmm by BioNica on 2009-09-22 23:51:36 as along with 2 people analogAI pansapiens
	ProtTest: selection of best-fit models of protein evolution [My Copy] Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 2104-2105. by F. Abascal, R. Zardoya, D. Posada posted to protein programs model method bioinformatics by BioNica on 2009-09-22 19:13:41 as along with 5 people and 1 group druvus lizbiogen cmzmasek akifumi penka Nie
	Comparing two programs of cognitive training in Alzheimer's disease: a pilot study [My Copy] Acta Neurologica Scandinavica, Vol. 105, No. 5. (May 2002), pp. 365-371. by E. Farina, R. Fioravanti, L. Chiavari, et al.E. Imbornone, M. Alberoni, S. Pomati, G. Pinardi, R. Pignatti, C. Mariani posted to training programs cognitive alzheimers by amandaalders on 2009-09-21 00:34:18 as
	Molecular implementation of simple logic programs [My Copy] Nature Nanotechnology, Vol. 4, No. 10. (02 August 2009), pp. 642-648. by Tom Ran, Shai Kaplan, Ehud Shapiro posted to 11-sep-09 programs molecular_computers logic algorithms by robertrentzsch to the group Orengo Group Journal Picks on 2009-09-11 11:17:59 as along with 1 person pirapira
	Improvement of Government Financing through Non-Conventional Methods: Reducing the Administrative Costs in the Public Sector [My Copy] Social Science Research Network Working Paper Series (17 June 2009) by Ani I. Matei, Teodora Dinu posted to sector public programs policies keywords eu costs and administrative by amatei on 2009-08-24 14:48:22 as
	Dendroscope: An interactive viewer for large phylogenetic trees [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (22 November 2007), 460. by D. Huson, R. Richter, C. Rausch, T. Dezulian, M. Franz, R. Rupp posted to programs phylogeny njplot by BioNica on 2009-08-18 20:45:24 as along with 2 people laughcry gjuggler
	WWW-query: An on-line retrieval system for biological sequence banks [My Copy] Biochimie, Vol. 78, No. 5. (1996), pp. 364-369. by G. Perrière, M. Gouy posted to programs phylogeny njplot by BioNica on 2009-08-18 20:24:27 as
	X-ray structure determination at low resolution [My Copy] Acta Crystallographica Section D, Vol. 65, No. 2. (01 Feb 2009), pp. 128-133. by Axel T. Brunger, Byron Delabarre, Jason M. Davies, William I. Weis posted to crystallography programs structure by martainn on 2009-05-12 14:39:32 as along with 1 person carlosjavierna
	Second Language Learning Through Immersion: A Review of U.S. Programs [My Copy] REVIEW OF EDUCATIONAL RESEARCH, Vol. 55, No. 4. (1 January 1985), pp. 541-561. by Fred Genesee posted to immersion language programs second by janevmeer on 2009-05-01 04:09:52 as
	Analyzing Personal Teaching Metaphors in Preservice Teacher Education as a Means for Encouraging Professional Development [My Copy] American Educational Research Journal, Vol. 31, No. 1. (1994), pp. 197-224. by Robert V. Bullough, David K. Stokes posted to attitudes attribution autobiographies computing courses diaries education educational educators evaluation failure foundations history journal objectives philosophy preservice programs reflective secondary self student teacher teachers teaching theory writing by gillamk on 2009-03-15 17:50:10 as along with 1 person jonathanpiano
	Teaching and Reconsidering the Social Foundations of Education: A self-study [My Copy] Studying Teacher Education, Vol. 4, No. 1. (2008), pp. 5-15. by Robert V. Bullough posted to attitudes autobiographies courses diaries education educational educators evaluation foundations history journal objectives philosophy preservice programs reflective secondary self student teacher teachers teaching writing by gillamk on 2009-03-15 17:01:11 as
	PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments. [My Copy] Nucleic acids research, Vol. 34, No. Web Server issue. (1 July 2006) by S. Moretti, F. Reinier, O. Poirot, et al.F. Armougom, S. Audic, V. Keduas, C. Notredame posted to alignment codon method programs protein by BioNica on 2009-03-15 02:25:53 as
	Maximum-likelihood analysis using TREE-PUZZLE. [My Copy] Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], Vol. Chapter 6 (March 2007) by H. A. Schmidt, A. von Haeseler posted to method phylogenetic phylogenetics phylogeny programs by BioNica on 2009-03-15 02:09:18 as
	IQPNNI: moving fast through tree space and stopping in time. [My Copy] Molecular biology and evolution, Vol. 21, No. 8. (1 August 2004), pp. 1565-1571. by L. S. Vinh, A. von Haeseler posted to method phylogenetic phylogenetics phylogeny programs by BioNica on 2009-03-15 01:50:55 as
	A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. [My Copy] Systematic biology, Vol. 52, No. 5. (October 2003), pp. 696-704. by S. Guindon, O. Gascuel posted to method phylogenetic phylogenetics phylogeny phyml programs by BioNica on 2009-03-15 01:32:30 as along with 13 people and 1 group chica calderonv swp09 oceanwind druvus bpb chrn aprasad lyongu treangen Haggan cdallett Auger Dead 60's
	Multiple sequence alignments [My Copy] Current Opinion in Structural Biology, Vol. 15, No. 3. (June 2005), pp. 261-266. by Iain M. Wallace, Gordon Blackshields, Desmond G. Higgins posted to alignment evolution fold-evolution programs structure by martainn on 2009-03-12 17:19:01 as along with 5 people Thaverkamp BioNica mdimmic bpb nklee
	Sensitive methods for determining the relatedness of proteins with limited sequence homology. [My Copy] Current opinion in biotechnology, Vol. 5, No. 4. (August 1994), pp. 361-371. by P. Argos posted to alignment fold-evolution programs structure by martainn on 2009-03-12 17:18:06 as
	Sequence context-specific profiles for homology searching [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 10. (10 March 2009), pp. 3770-3775. by A. Biegert, J. Söding posted to alignment fold-evolution programs small-motifs by martainn on 2009-03-12 17:17:12 as along with 7 people yylin ikirmitz TRHvidsten operon dakelley phoenixzxl zwang
	Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function [My Copy] Journal of Computational Chemistry, Vol. 19, No. 14. (6 January 1998), pp. 1639-1662. by Garrett M. Morris, David S. Goodsell, Robert S. Halliday, et al.Ruth Huey, William E. Hart, Richard K. Belew, Arthur J. Olson posted to programs by Lombardo_7 on 2009-03-03 12:20:49 as along with 23 people and 2 groups trishul nickolay npt11tpn jamalex joule lna karinaecomp oteri A_Coletta_Thesis arlam dgruiz nachtalp P2324548 yongzhao peprovy tovrstra papatonyhill schlauchi carlescorbi middledomain LamBras andreramme UVA_mag_res Chang group TSRI_MGL
	Results of the first year of active for life: translation of 2 evidence-based physical activity programs for older adults into community settings. [My Copy] American journal of public health, Vol. 96, No. 7. (July 2006), pp. 1201-1209. by S. Wilcox, M. Dowda, S. F. Griffin, et al.C. Rheaume, M. G. Ory, L. Leviton, A. C. King, A. Dunn, D. M. Buchner, T. Bazzarre, P. A. Estabrooks, K. Campbell-Voytal, J. Bartlett-Prescott, D. Dowdy, C. M. Castro, R. A. Carpenter, D. A. Dzewaltowski, R. Mockenhaupt posted to activity based community multi-cultural physical programs by depression on 2009-03-01 22:06:01 as
	Computational resources for cryo-electron tomography in Bsoft. [My Copy] Journal of structural biology, Vol. 161, No. 3. (March 2008), pp. 232-242. by J. B. Heymann, G. Cardone, D. C. Winkler, A. C. Steven posted to programs by mbeeby on 2009-01-27 18:52:15 as
	NMR structures of two designed proteins with high sequence identity but different fold and function [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 38. (23 September 2008), pp. 14412-14417. by Yanan He, Yihong Chen, Patrick Alexander, Philip N. Bryan, John Orban posted to fold-evolution programs structure by martainn on 2009-01-27 14:59:25 as along with 8 people bqcao diod qluo wilbur markchen zwang reyez kentsis
	Sequence-structure mapping errors in the PDB: OB-fold domains. [My Copy] Protein science : a publication of the Protein Society, Vol. 13, No. 6. (June 2004), pp. 1594-1602. by C. Venclovas, K. Ginalski, C. Kang posted to building crystallography programs structure by martainn on 2009-01-27 14:34:14 as
	A comparison of youth-driven and adult-driven youth programs: Balancing inputs from youth and adults [My Copy] Journal of Community Psychology, Vol. 33, No. 1. (2005), pp. 57-74. by Reed Larson, Kathrin Walker, Nickki Pearce posted to adult driven programs vs youth by luketracy on 2008-12-24 16:45:56 as along with 1 person asubramaniam
	Effects of a School-Based Prevention Program for Potential High School Dropouts and Drug Abusers [My Copy] Substance Use & Misuse, Vol. 25, No. 7. (1990), pp. 773-801. by Leona L. Eggert, Christine D. Seyi, Liela J. Nicholas posted to at-risk prevention programs school-based by blamar on 2008-12-09 01:44:02 as
	Effective Programs in Elementary Mathematics: A Best-Evidence Synthesis [My Copy] REVIEW OF EDUCATIONAL RESEARCH, Vol. 78, No. 3. (1 September 2008), pp. 427-515. by Robert E. Slavin, Cynthia Lake posted to elementary mathematics programs by rmosvold to the group Mathematics education on 2008-12-08 19:34:52 as along with 1 person nurgal
	Program Refactoring, Program Synthesis, and Model-Driven Development [My Copy] Compiler Construction (2007), pp. 156-171. by Don Batory posted to development mda mdd mdsd model-driven programs refactoring synthesis by RWeiss on 2008-10-24 05:54:22 as along with 2 people leonardo jpbernardy
	Slicing Programs with Arbitrary Control-flow [My Copy] In Automated and Algorithmic Debugging (1993), pp. 206-222. by Thomas Ball, Susan Horwitz posted to control-flow programs slicing by RWeiss on 2008-10-21 07:17:37 as along with 1 person bunge
	To test or not to test: do workplace drug testing programs discourage employee drug use? [My Copy] Social Science Research, Vol. 33, No. 1. (March 2004), pp. 45-63. by M. French posted to employee program programs test testing workplace by Charley991 on 2008-10-13 15:15:59 as
	Mapping the topology and determination of a low-resolution three-dimensional structure of the calmodulin-melittin complex by chemical cross-linking and high-resolution FTICRMS: direct demonstration of multiple binding modes. [My Copy] Biochemistry, Vol. 43, No. 16. (27 April 2004), pp. 4703-4715. by D. M. Schulz, C. Ihling, G. M. Clore, A. Sinz posted to 1paper docking programs by martainn on 2008-10-10 17:23:13 as
	Improved Structures of Full-Length p97, an AAA ATPase: Implications for Mechanisms of Nucleotide-Dependent Conformational Change [My Copy] Structure, Vol. 16, No. 5. (7 May 2008), pp. 715-726. by Jason M. Davies, Axel T. Brunger, William I. Weis posted to 1paper crystallography programs by martainn on 2008-10-10 17:20:04 as along with 1 person cactus
	PHENIX: building new software for automated crystallographic structure determination. [My Copy] Acta crystallographica. Section D, Biological crystallography, Vol. 58, No. Pt 11. (November 2002), pp. 1948-1954. by P. D. Adams, R. W. Grosse-Kunstleve, L. W. Hung, et al.T. R. Ioerger, A. J. McCoy, N. W. Moriarty, R. J. Read, J. C. Sacchettini, N. K. Sauter, T. C. Terwilliger posted to 1paper crystallography programs software by martainn on 2008-10-10 17:19:07 as
	Crystallography & NMR system: A new software suite for macromolecular structure determination. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 54 ( Pt 5) (1 September 1998), pp. 905-921. by A. T. Brünger, P. D. Adams, G. M. Clore, et al.W. L. DeLano, P. Gros, R. W. Grosse-Kunstleve, J. S. Jiang, J. Kuszewski, M. Nilges, N. S. Pannu, R. J. Read, L. M. Rice, T. Simonson, G. L. Warren posted to 1paper crystallography docking programs software by martainn on 2008-10-10 17:17:23 as along with 3 people and 2 groups laurabailey miorel jwm Radiation_Damage Stressosome
	The CCP4 suite: programs for protein crystallography. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 50, No. Pt 5. (1 September 1994), pp. 760-763. by posted to 1paper crystallography programs software by martainn on 2008-10-10 17:16:18 as along with 2 people and 2 groups jwm massivemayhem Radiation_Damage Stressosome
	Coot: model-building tools for molecular graphics [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 60, No. 1. (01 December 2004), pp. 2126-2132. by Emsley, P., Cowtan, K. posted to 1paper crystallography programs by martainn on 2008-10-10 17:14:34 as along with 3 people and 2 groups miorel jwm robert Radiation_Damage Stressosome
	Detecting folding motifs and similarities in protein structures. [My Copy] Methods in enzymology, Vol. 277 (1997), pp. 525-545. by G. J. Kleywegt, T. A. Jones posted to 1paper fold-evolution programs small-motifs by martainn on 2008-10-10 17:13:42 as
	XtalView/Xfit--A versatile program for manipulating atomic coordinates and electron density. [My Copy] Journal of structural biology, Vol. 125, No. 2-3. (y 1999), pp. 156-165. by D. E. McRee posted to 1paper crystallography programs by martainn on 2008-10-10 17:09:53 as
	Protein docking using spherical polar Fourier correlations. [My Copy] Proteins, Vol. 39, No. 2. (1 May 2000), pp. 178-194. by D. W. Ritchie, G. J. Kemp posted to 1paper docking programs by martainn on 2008-10-10 12:09:33 as along with 3 people and 1 group csrocha tjimenez bicko structural_bioinformatics
	HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets. [My Copy] Proteins, Vol. 69, No. 4. (1 December 2007), pp. 726-733. by S. J. de Vries, A. D. van Dijk, M. Krzeminski, et al.M. van Dijk, A. Thureau, V. Hsu, T. Wassenaar, A. M. Bonvin posted to 1paper docking programs by martainn on 2008-10-10 12:06:08 as along with 1 person chad_davis
	NORMA: a tool for flexible fitting of high-resolution protein structures into low-resolution electron-microscopy-derived density maps [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 62, No. 9. (01 September 2006), pp. 1098-1100. by Suhre, K., Navaza, J., Sanejouand, -H posted to 1paper crystallography dynamics programs by martainn on 2008-10-10 12:03:09 as along with 4 people and 1 group dawnsong apaydin aqeel yongzhao TSRI_MGL
	Open-and-shut cases in coiled-coil assembly: alpha-sheets and alpha-cylinders. [My Copy] Protein science : a publication of the Protein Society, Vol. 10, No. 3. (March 2001), pp. 668-673. by J. Walshaw, D. N. Woolfson posted to coiled-coils docking evolution programs by martainn on 2008-10-07 13:02:34 as along with 1 person kgutwin
	Extended knobs-into-holes packing in classical and complex coiled-coil assemblies. [My Copy] Journal of structural biology, Vol. 144, No. 3. (December 2003), pp. 349-361. by John Walshaw, Derek N. Woolfson posted to 1paper coiled-coils docking evolution programs by martainn on 2008-10-07 13:01:24 as along with 4 people TLVincent kgutwin gbartbristol ca3295
	Socket: a program for identifying and analysing coiled-coil motifs within protein structures. [My Copy] Journal of molecular biology, Vol. 307, No. 5. (13 April 2001), pp. 1427-1450. by J. Walshaw, D. N. Woolfson posted to coiled-coils docking evolution programs by martainn on 2008-10-07 13:00:41 as along with 5 people TLVincent oteri kgutwin gbartbristol ca3295
	Proposals, grants, projects and careers: a strategic view for libraries [My Copy] Library Management, Vol. 25, No. 8-9., 376. by Andrew Herkovic posted to budget programs by joanpeiffer on 2008-09-29 01:08:28 as along with 1 person kpage
	Rely-guarantee approach to reasoning about aspect-oriented programs [My Copy] In International Workshop on Software engineering properties of languages and aspect technologies (March 2007) by Raffi Khatchadourian, Neelam Soundarajan posted to aspect-oriented behavioral programs reasoning by khatchad on 2008-08-04 14:30:14 as
	Assessing After-School Programs as Contexts for Youth Development [My Copy] Youth Society, Vol. 32, No. 4. (1 June 2001), pp. 421-446. by Joseph Kahne, Jenny Nagaoka, Andrea Brown, James O'Brien, Therese Quinn, Keith Thiede posted to after assessment programs schoo by dmartinez on 2008-06-21 20:50:15 as

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1paper	13
crystallography	13
structure	9
docking	8
fold-evolution	8
logic	5
method	5
phylogeny	5
small-motifs	5
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evolution	4
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schoo	1
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