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	Reaction path study of conformational transitions in flexible systems: Applications to peptides [My Copy] The Journal of Chemical Physics, Vol. 92, No. 9. (1990), pp. 5580-5601. by Ryszard Czerminski, Ron Elber posted to transition_path reaction_paths pes_based by Diego_Prada on 2009-12-15 19:49:09 as along with 1 person scampos
	Computing time scales from reaction coordinates by milestoning [My Copy] The Journal of Chemical Physics, Vol. 120, No. 23. (2004), pp. 10880-10889. by Anton K. Faradjian, Ron Elber posted to transition_path reaction_paths methods by Diego_Prada on 2009-11-25 19:23:28 as along with 1 person apaydin
	TRANSITION PATH SAMPLING: Throwing Ropes Over Rough Mountain Passes, in the Dark [My Copy] Annual Review of Physical Chemistry, Vol. 53, No. 1. (2002), pp. 291-318. by Peter G. Bolhuis, David Chandler, Christoph Dellago, Phillip L. Geissler posted to transition_path reaction_paths methods chapt_cmn by Diego_Prada on 2009-11-25 18:42:21 as along with 5 people doktornoe cjryan apaydin allmensch jun
	Structural mechanism of the recovery stroke in the Myosin molecular motor [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 19. (10 May 2005), pp. 6873-6878. by Stefan Fischer, BjÃ¶rn WindshÃ¼gel, Daniel Horak, Kenneth C. Holmes, Jeremy C. Smith posted to transition_path reaction_paths methods chapt_cmn by Diego_Prada on 2009-11-25 12:29:13 as along with 4 people and 2 groups ckmyo barry shuns yalexeev structural_bioinformatics Bioinformatics
	Steered molecular dynamics and mechanical functions of proteins [My Copy] Current Opinion in Structural Biology, Vol. 11, No. 2. (1 April 2001), pp. 224-230. by B. Isralewitz, M. Gao, K. Schulten posted to transition_path reaction_paths methods by Diego_Prada on 2009-11-24 18:31:21 as along with 4 people and 2 groups devinli barry ttjoseph LamBras structural_bioinformatics Bioinformatics
	Targeted molecular dynamics: A new approach for searching pathways of conformational transitions [My Copy] Journal of Molecular Graphics, Vol. 12, No. 2. (June 1994), pp. 84-89. by J. Schlitter, M. Engels, P. Krüger posted to transition_path reaction_paths problems_fel_dof methods chapt_cmn by Diego_Prada on 2009-11-24 17:52:14 as along with 2 people cactus LamBras
	Conjugate peak refinement: an algorithm for finding reaction paths and accurate transition states in systems with many degrees of freedom [My Copy] Chemical Physics Letters, Vol. 194, No. 3. (26 June 1992), pp. 252-261. by S. Fischer, M. Karplus posted to free_energy transition_path reaction_paths problems_fel_dof methods by Diego_Prada on 2009-11-23 17:38:17 as along with 1 person ckmyo
	Pathways for Conformational Change in Nitrogen Regulatory Protein C from Discrete Path Sampling [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 8. (1 February 2008), pp. 2456-2465. by Mey Khalili, David J. Wales posted to free_energy first_passage protein_dynamics qha reaction_paths transition_path transition_states by Diego_Prada on 2009-07-02 12:02:29 as
	Refined kinetic transition networks for the GB1 hairpin peptide [My Copy] Phys. Chem. Chem. Phys., Vol. 11, No. 18. (2009), pp. 3341-3354. by Joanne M. Carr, David J. Wales posted to free_energy beta-hairpin first_passage hexapeptide protein_dynamics protein_folding qha reaction_paths short-peptides transition_path transition_states by Diego_Prada on 2009-07-02 11:55:15 as
	Protein folding on rugged energy landscapes: Conformational diffusion on fractal networks [My Copy] (24 Jun 2009) by Gregg Lois, J. Blawzdziewicz, Corey S. O'Hern posted to free_energy cmn coarse-grained complex_systems first_passage hp_model networks protein_dynamics protein_folding proteins reaction_paths transition_path by Diego_Prada on 2009-06-25 16:27:33 as
	Calculating rate constants and committor probabilities for transition networks by graph transformation [My Copy] The Journal of Chemical Physics, Vol. 130, No. 20. (2009), 204111. by David J. Wales posted to reaction_paths transition_path transition_states by Diego_Prada on 2009-06-09 11:29:56 as
	Temperature dependent reaction coordinates [My Copy] The Journal of Chemical Physics, Vol. 112, No. 13. (2000), pp. 5539-5545. by Ron Elber, David Shalloway posted to reaction_paths transition_path transition_states by Diego_Prada on 2009-06-08 21:13:47 as
	A statistical method for identifying transition states in high dimensional problems [My Copy] The Journal of Chemical Physics, Vol. 85, No. 9. (1986), pp. 5045-5048. by Lawrence R. Pratt posted to reaction_paths transition_path transition_states by Diego_Prada on 2009-06-08 21:04:01 as along with 1 person jrperillaj
	A method for determining reaction paths in large molecules: Application to myoglobin [My Copy] Chemical Physics Letters, Vol. 139 (1987), pp. 375-380. by R. Elber, M. Karplus posted to reaction_paths transition_path by Diego_Prada on 2009-06-08 20:43:50 as

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