Tag ref-transloc [34 articles] Export Sort

Recent papers classified by the tag ref-transloc.

Hide details

	TransportDB: a relational database of cellular membrane transport systems. [My Copy] Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004) by Q. Ren, K. H. Kang, I. T. Paulsen posted to ref-transloc by zlu on 2006-06-26 23:53:38 as
	BioText Team Report for the TREC 2003 Genomics Track [My Copy] In Proceedings of the Twelfth Text REtrieval Conference (2003), pp. 612-621. by G. Bhalotia, P. I. Nakov, A. S. Schwartz, M. A. Hearst posted to ref-transloc by zlu on 2006-06-26 18:13:53 as
	Extracting molecular binding relationships from biomedical text [My Copy] In Proceedings of the sixth conference on Applied natural language processing (2000), pp. 188-195. by Thomas C. Rindflesch, Jayant V. Rajan, Lawrence Hunter posted to ref-transloc by zlu on 2006-06-26 18:11:01 as
	Building embedded conceptual parsers [My Copy] (1994) by William A. Fitzgerald posted to ref-transloc by zlu on 2006-06-26 18:04:04 as
	EDGAR: extraction of drugs, genes and relations from the biomedical literature. [My Copy] Pac Symp Biocomput (2000), pp. 517-528. by T. C. Rindflesch, L. Tanabe, J. N. Weinstein, L. Hunter posted to ref-transloc by zlu on 2006-06-26 01:06:35 as along with 2 people and 2 groups irenas ibuch Bioinformatics dbk-lab
	Database resources of the National Center for Biotechnology Information. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by D. L. Wheeler, T. Barrett, D. A. Benson, et al.S. H. Bryant, K. Canese, V. Chetvernin, D. M. Church, M. Dicuccio, R. Edgar, S. Federhen, L. Y. Geer, W. Helmberg, Y. Kapustin, D. L. Kenton, O. Khovayko, D. J. Lipman, T. L. Madden, D. R. Maglott, J. Ostell, K. D. Pruitt, G. D. Schuler, L. M. Schriml, E. Sequeira, S. T. Sherry, K. Sirotkin, A. Souvorov, G. Starchenko, T. O. Suzek, R. Tatusov, T. A. Tatusova, L. Wagner, E. Yaschenko posted to ref-transloc by zlu on 2006-06-26 01:04:57 as along with 8 people aalibes miguel kuhn dullhunk duartemolha happy_manatee jdiggans frohike
	Extraction of transcript diversity from scientific literature. [My Copy] PLoS Comput Biol, Vol. 1, No. 1. (June 2005) by P. K. Shah, L. J. Jensen, S. Boué, P. Bork posted to blp-ie ref-transloc by zlu on 2006-06-26 01:02:40 as along with 3 people and 1 group Cortel yas larsjuhljensen T_lab
	TCDB: the Transporter Classification Database for membrane transport protein analyses and information. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by M. H. Saier, C. V. Tran, R. D. Barabote posted to ref-transloc by zlu on 2006-06-26 01:00:40 as along with 1 person cgaugain
	GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data. [My Copy] Journal of biomedical informatics, Vol. 37, No. 1. (February 2004), pp. 43-53. by A. Rzhetsky, I. Iossifov, T. Koike, et al.M. Krauthammer, P. Kra, M. Morris, H. Yu, P. A. Duboué, W. Weng, W. J. Wilbur, V. Hatzivassiloglou, C. Friedman posted to ref-transloc by zlu on 2006-06-26 00:54:30 as along with 6 people and 3 groups guhjy Effie yas wnpx bundschu bhaddow NaCTeM T_lab generif_paper
	Robust relational parsing over biomedical literature: extracting inhibit relations. [My Copy] Pac Symp Biocomput (2002), pp. 362-373. by J. Pustejovsky, J. Castaño, J. Zhang, M. Kotecki, B. Cochran posted to blp-ie ref-transloc by zlu on 2006-06-26 00:51:58 as along with 5 people and 3 groups babaluma artaban421 henk-cul pault helliontroy dbmi-nlp NaCTeM biomedical-nlp
	A pragmatic information extraction strategy for gathering data on genetic interactions. [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 8 (2000), pp. 279-285. by D. Proux, F. Rechenmann, L. Julliard posted to ref-transloc by zlu on 2006-06-26 00:50:22 as
	Automated extraction of information on protein-protein interactions from the biological literature. [My Copy] Bioinformatics, Vol. 17, No. 2. (February 2001), pp. 155-161. by T. Ono, H. Hishigaki, A. Tanigami, T. Takagi posted to blp-ie ref-transloc by zlu on 2006-06-26 00:48:52 as along with 9 people and 4 groups pault arafalov irenas yas blackbart helliontroy bundschu satre yggdrasil NaCTeM T_lab biomedical-nlp generif_paper
	Beyond the clause: extraction of phosphorylation information from medline abstracts. [My Copy] Bioinformatics, Vol. 21 Suppl 1 (1 June 2005) by M. Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker posted to blp-ie ref-transloc by zlu on 2006-06-26 00:47:37 as along with 3 people Enro miguel neils
	Textpresso: an ontology-based information retrieval and extraction system for biological literature. [My Copy] PLoS biology, Vol. 2, No. 11. (November 2004) by H. M. Müller, E. E. Kenny, P. W. Sternberg posted to ref-transloc by zlu on 2006-06-26 00:43:27 as along with 16 people and 4 groups artaban421 mitko thegoose2 liblab tharris irenas Enro guhjy yas dullhunk hpiwowar fisherp daniel_schober diogomartins mroos vlachmore C. elegans / WormBase dbk-lab T_lab AID
	Speech and Language Processing: An Introduction to Natural Language Processing, Computational Linguistics and Speech Recognition (Prentice Hall Series in Artificial Intelligence) [My Copy] (05 January 2000) by Daniel Jurafsky, James H. Martin posted to ref-transloc by zlu on 2006-06-26 00:41:15 as along with 13 people and 1 group euclid pengyifan eddymier leidner metropol caporaso bigbossman matwendt aklassen mircea asterix77 spinaltap526 quianominorleo biomedical-nlp
	Natural Language Processing for Online Applications: Text Retrieval, Extraction, and Categorization (Natural Language Processing) [My Copy] by Peter Jackson, Isabelle Moulinier posted to ref-transloc by zlu on 2006-06-26 00:40:18 as
	Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors. [My Copy] Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 557-568. by F. Horn, A. L. Lau, F. E. Cohen posted to blp-ie ref-transloc by zlu on 2006-06-26 00:38:40 as along with 3 people and 1 group yuslinaz bqchinh yas T_lab
	Literature mining and database annotation of protein phosphorylation using a rule-based system [My Copy] Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2759-2765. by Z. Z. Hu, M. Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, C. H. Wu posted to blp-ie ref-transloc by zlu on 2006-06-26 00:37:25 as along with 3 people benny jacky957 satre
	Two biomedical sublanguages: a description based on the theories of Zellig Harris. [My Copy] J Biomed Inform, Vol. 35, No. 4. (August 2002), pp. 222-235. by C. Friedman, P. Kra, A. Rzhetsky posted to ref-transloc by zlu on 2006-06-26 00:36:18 as along with 1 person and 1 group irenas dbk-lab
	UIMA: an architectural approach to unstructured information processing in the corporate research environment [My Copy] Nat. Lang. Eng., Vol. 10, No. 3-4. (2004), pp. 327-348. by David Ferrucci, Adam Lally posted to ref-transloc by zlu on 2006-06-26 00:34:07 as along with 2 people N-te_Jr yggdrasil
	The Biomolecular Interaction Network Database and related tools 2005 update. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by C. Alfarano, C. E. Andrade, K. Anthony, et al.N. Bahroos, M. Bajec, K. Bantoft, D. Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D'Abreo, I. Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, H. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, R. Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, B. Parker, G. Pintilie, R. Pirone, J. J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, K. Snyder, R. Stasiuk, D. Strumpf, B. Tuekam, S. Tao, Z. Wang, M. White, R. Willis, C. Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, S. Zhang, K. Zheng, T. Pawson, B. F. Ouellette, C. W. Hogue posted to ref-transloc by zlu on 2006-06-26 00:29:58 as along with 7 people and 3 groups hardi alaninmcr yas balajis frohike dagmar dragonrez T_lab dIEMoSIRIS compneur
	Tagging gene and protein names in biomedical text. [My Copy] Bioinformatics, Vol. 18, No. 8. (August 2002), pp. 1124-1132. by L. Tanabe, W. J. Wilbur posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:29:42 as along with 9 people and 4 groups eesruiz cisevol irenas jelsas fisherp bundschu flint johnkork gaudan ImagCom - Biomedical Text Computing BergmanLab dbk-lab generif_paper
	ABNER: an open source tool for automatically tagging genes, proteins, and other entity names in text. [My Copy] Bioinformatics (28 April 2005) by Burr Settles posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:29:13 as along with 1 person and 1 group irenas dbk-lab
	Mining MEDLINE: abstracts, sentences, or phrases? [My Copy] Pac Symp Biocomput (2002), pp. 326-337. by J. Ding, D. Berleant, D. Nettleton, E. Wurtele posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:14:12 as along with 4 people and 2 groups yas bundschu satre ianturton T_lab generif_paper
	Toward information extraction: identifying protein names from biological papers. [My Copy] Pac Symp Biocomput (1998), pp. 707-718. by K. Fukuda, A. Tamura, T. Tsunoda, T. Takagi posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:12:43 as along with 3 people and 2 groups caporaso bundschu johnkork biomedical-nlp generif_paper
	Extracting human protein interactions from MEDLINE using a full-sentence parser. [My Copy] Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 604-611. by N. Daraselia, A. Yuryev, S. Egorov, S. Novichkova, A. Nikitin, I. Mazo posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:08:40 as along with 9 people and 2 groups babaluma henk-cul liblab bqchinh irenas Enro miguel natsu satre dbmi-nlp dbk-lab
	Protein Targetting, Transport, and Translocation [My Copy] (30 September 2001) by R. E. Dalbey, Gunnar Von Heijne posted to ref-corpus ref-transloc by zlu on 2006-06-09 23:07:47 as
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by M. Ashburner, C. A. Ball, J. A. Blake, et al.D. Botstein, H. Butler, J. M. Cherry, A. P. Davis, K. Dolinski, S. S. Dwight, J. T. Eppig, M. A. Harris, D. P. Hill, L. Issel-Tarver, A. Kasarskis, S. Lewis, J. C. Matese, J. E. Richardson, M. Ringwald, G. M. Rubin, G. Sherlock posted to ref-corpus ref-transloc by zlu on 2006-06-09 22:46:23 as along with 78 people and 8 groups josepe krapnik suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez humburg mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae 8_01 BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
	Molecular Biology of the Cell, Fourth Edition [My Copy] (2002) by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter posted to ref-corpus ref-transloc by zlu on 2006-06-09 22:44:14 as along with 6 people and 3 groups aprasad reyez rhem1224 cwbrown larios dherkova EisenLab TCR_Signaling SysbioMPI-TCells
	PASBio: predicate-argument structures for event extraction in molecular biology. [My Copy] BMC Bioinformatics, Vol. 5 (19 October 2004) by T. Wattarujeekrit, P. K. Shah, N. Collier posted to ref-corpus ref-transloc by zlu on 2006-05-11 18:38:24 as along with 5 people and 2 groups yas caporaso helliontroy johnkork mircea T_lab biomedical-nlp
	Creating Semantic Web Contents with Protege-2000 [My Copy] IEEE Intelligent Systems, Vol. 2, No. 16. (2001), pp. 60-71. by Natalya F. Noy, Michael Sintek, Stefan Decker, Monica Crubezy, Ray W. Fergerson, Mark A. Musen posted to blp-annotation ref-corpus ref-transloc by zlu on 2006-04-30 22:51:03 as
	BioCreAtIvE task 1A: gene mention finding evaluation. [My Copy] BMC Bioinformatics, Vol. 6 Suppl 1 (2005) by A. Yeh, A. Morgan, M. Colosimo, L. Hirschman posted to blp-biocreative ref-corpus ref-transloc by zlu on 2006-04-24 22:56:48 as along with 4 people and 2 groups yas caporaso helliontroy johnkork T_lab biomedical-nlp
	Literature mining for the biologist: from information retrieval to biological discovery [My Copy] Nature Reviews Genetics, Vol. 7, No. 2. (01 February 2006), pp. 119-129. by Lars J. Jensen, Jasmin Saric, Peer Bork posted to blp-review ref-corpus ref-transloc by zlu on 2006-04-22 21:08:43 as along with 50 people and 5 groups wkretzsch mgaldino krapnik tanyacovi6 MARCOUNAM eudominguezmartin sm-rush LEONRANGEL artaban421 rocling bertelsen virolog dipenps druvus Zephyrus fgibson psique lmichan cisevol ilyashl henk-cul daforerog isimpson dansullivanblk yggdrasil Enro guhjy kuhn yas dullhunk hpiwowar dgront caporaso jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch Bioinformatics BergmanLab T_lab biomedical-nlp ADMiRes
	Extraction of regulatory gene/protein networks from Medline [My Copy] Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 645-650. by Jasmin Saric, Lars J. Jensen, Isabel Rojas, Peer Bork posted to blp-ie ref-transloc by zlu on 2006-04-22 21:06:07 as along with 5 people and 1 group bsamal kaihong lflorez snuppepuppan yas T_lab