Tag repeats [at least 200 articles] Export

Recent papers classified by the tag repeats.

	De Novo Repeat Classification and Fragment Assembly [My Copy] Genome Research In Genome Research, Vol. 14, No. 9. (September 2004), pp. 1786-1796. by Paul A. Pevzner, Haixu Tang, Glenn Tesler posted to repeats assembly by claire_jubin on 2009-12-16 17:20:59 as along with 17 people n00c pachorip natstreet dakelley druvus brl briann operon timflutre azazello prajlondhe nedwards urgi yoanjacquemin dmc Ema Neeperando
	PILER: identification and classification of genomic repeats [My Copy] Bioinformatics, Vol. 21, No. suppl_1. (1 June 2005), pp. i152-158. by Robert C. Edgar, Eugene W. Myers posted to repeats piler classification by n00c on 2009-12-16 17:13:55 as along with 8 people natstreet mmartin druvus treangen jackjackjjj timflutre urgi yoanjacquemin
	DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006), 155. by Erik Arner, Martti Tammi, Anh N. Tran, Ellen Kindlund, Bjorn Andersson posted to viewer tool software repeats finishing editor dnptrapper assembly by n00c on 2009-12-16 16:36:54 as along with 3 people druvus dakelley azazello
	ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun [My Copy] PLoS Comput Biol, Vol. 1, No. 4. (23 September 2005), e43. by Ruiqiang Li, Jia Ye, Songgang Li, et al.Jing Wang, Yujun Han, Chen Ye, Jian Wang, Huanming Yang, Jun Yu, Gane K. Wong, Jun Wang posted to transposable-emenets tool software repeats reas by n00c on 2009-12-14 22:47:11 as along with 4 people natstreet operon timflutre yoanjacquemin
	A clustering method for repeat analysis in DNA sequences [My Copy] Genome Biology, Vol. 2, No. 8. (2001), pp. research0027.1-research0027.11. by Natalia Volfovsky, Brian Haas, Steven Salzberg posted to suffix-tree repeats repeatfinder clustering by n00c on 2009-12-14 22:44:50 as along with 3 people operon druvus yoanjacquemin
	Empirical comparison of ab initio repeat finding programs [My Copy] Nucl. Acids Res., Vol. 36, No. 7. (20 February 2008), pp. gkn064-2294. by Surya Saha, Susan Bridges, Zenaida V. Magbanua, Daniel G. Peterson posted to specificity sensitivity repeats repeatgluer de-novo comparison ab-initio by n00c on 2009-12-14 22:21:16 as along with 11 people thegoose2 orzenil natstreet druvus treangen operon timflutre wisdom_love Ema GustavoLacerda tharris
	The sequence and de novo assembly of the giant panda genome [My Copy] Nature, Vol. advance online publication (13 December 2009) by Ruiqiang Li, Wei Fan, Geng Tian, et al.Hongmei Zhu, Lin He, Jing Cai, Quanfei Huang, Qingle Cai, Bo Li, Yinqi Bai, Zhihe Zhang, Yaping Zhang, Wen Wang, Jun Li, Fuwen Wei, Heng Li, Min Jian, Jianwen Li, Zhaolei Zhang, Rasmus Nielsen, Dawei Li, Wanjun Gu, Zhentao Yang, Zhaoling Xuan, Oliver A. Ryder, Frederick C. Leung, Yan Zhou, Jianjun Cao, Xiao Sun, Yonggui Fu, Xiaodong Fang, Xiaosen Guo, Bo Wang, Rong Hou, Fujun Shen, Bo Mu, Peixiang Ni, Runmao Lin, Wubin Qian, Guodong Wang, Chang Yu, Wenhui Nie, Jinhuan Wang, Zhigang Wu, Huiqing Liang, Jiumeng Min, Qi Wu, Shifeng Cheng, Jue Ruan, Mingwei Wang, Zhongbin Shi, Ming Wen, Binghang Liu, Xiaoli Ren, Huisong Zheng, Dong Dong, Kathleen Cook, Gao Shan, Hao Zhang, Carolin Kosiol, Xueying Xie, Zuhong Lu, Hancheng Zheng, Yingrui Li, Cynthia C. Steiner, Tommy T. Lam, Siyuan Lin, Qinghui Zhang, Guoqing Li, Jing Tian, Timing Gong, Hongde Liu, Dejin Zhang, Lin Fang, Chen Ye, Juanbin Zhang, Wenbo Hu, Anlong Xu, Yuanyuan Ren, Guojie Zhang, Michael W. Bruford, Qibin Li, Lijia Ma, Yiran Guo, Na An, Yujie Hu, Yang Zheng, Yongyong Shi, Zhiqiang Li, Qing Liu, Yanling Chen, Jing Zhao, Ning Qu, Shancen Zhao, Feng Tian, Xiaoling Wang, Haiyin Wang, Lizhi Xu, Xiao Liu, Tomas Vinar, Yajun Wang, Tak-Wah Lam, Siu-Ming Yiu, Shiping Liu, Hemin Zhang, Desheng Li, Yan Huang, Xia Wang, Guohua Yang, Zhi Jiang, Junyi Wang, Nan Qin, Li Li, Jingxiang Li, Lars Bolund, Karsten Kristiansen, Gane K. Wong, Maynard Olson, Xiuqing Zhang, Songgang Li, Huanming Yang, Jian Wang, Jun Wang posted to tandem-repeats solexa soapsnp short-read repeats repeatmodeler panda illumina genome de-novo carnivore assembly by n00c on 2009-12-14 20:14:26 as along with 5 people and 1 group natstreet daforerog druvus ppgardne torfinnnome Journal picks
	A Simple Cipher Governs DNA Recognition by TAL Effectors [My Copy] Science In Science, Vol. 326, No. 5959. (11 December 2009), 1501. by Matthew J. Moscou, Adam J. Bogdanove posted to repeats protein pathogen genus_xanthomonas effector dna_recognition dna binding by robfsouza on 2009-12-14 17:50:02 as along with 3 people icq242500260 Dnogas stubrown
	QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects [My Copy] Bioinformatics In Bioinformatics (10 December 2009), btp670. by Emese Meglecz, Caroline Costedoat, Vincent Dubut, et al.Andre Gilles, Thibaut Malausa, Nicolas Pech, Jean-Francois Martin posted to ssr-markers software repeats primer by orzenil on 2009-12-12 18:46:25 as along with 2 people natstreet druvus
	Finishing Repetitive Regions Automatically with Dupfinisher [My Copy] In Proceedings of the 2006 International Conference on Bioinformatics Computational Biology, BIOCOMP'06 (26-29 June 2006) by Cliff S. Han, Patrick Chain edited by Hamid R. Arabnia, Homayoun Valafar posted to tool software shotgun repeats genome finishing dupfinisher by n00c on 2009-12-07 15:38:04 as along with 2 people natstreet druvus
	Complete Genomic Characterization of a Pathogenic A.II Strain of Francisella tularensis Subspecies tularensis [My Copy] PloS one In PLoS ONE, Vol. 2, No. 9. (26 September 2007), e947. by Stephen M. Beckstrom-Sternberg, Raymond K. Auerbach, Shubhada Godbole, et al.John V. Pearson, James S. Beckstrom-Sternberg, Zuoming Deng, Christine Munk, Kristy Kubota, Yan Zhou, David Bruce, Jyothi Noronha, Richard H. Scheuermann, Aihui Wang, Xianying Wei, Jianjun Wang, Jicheng Hao, David M. Wagner, Thomas S. Brettin, Nancy Brown, Paul Gilna, Paul S. Keim posted to shotgun repeats genome dupfinisher bacterial assembly by n00c on 2009-12-07 15:29:16 as along with 4 people ssiddara treangen Xavier druvus
	Separation of nearly identical repeats in shotgun assemblies using defined nucleotide positions, DNPs [My Copy] Bioinformatics, Vol. 18, No. 3. (1 March 2002), pp. 379-388. by Martti T. Tammi, Erik Arner, Tom Britton, Bjorn Andersson posted to tandem-repeats shotgun repeats assembly by n00c on 2009-12-03 01:07:25 as along with 2 people Neeperando dakelley
	Global Microsatellite Content Distinguishes Humans, Primates, Animals, and Plants [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2809-2819. by C. L. Galindo, L. J. McIver, J. F. McCormick, et al.M. A. Skinner, Y. Xie, R. A. Gelhausen, K. Ng, N. M. Kumar, H. R. Garner posted to repeats phylogenetics kmer arrays by djkt on 2009-11-11 00:45:24 as
	Mononucleotide repeats are asymmetrically distributed in fungal genes. [My Copy] BMC genomics, Vol. 9 (11 December 2008), 596. by Mark W. van Passel, Leo H. de Graaff posted to repeats fungi evolution by stajich to the group Mycology on 2009-11-04 17:05:00 as
	REPuter: the manifold applications of repeat analysis on a genomic scale. [My Copy] Nucleic acids research, Vol. 29, No. 22. (15 November 2001), pp. 4633-4642. by S. Kurtz, J. V. Choudhuri, E. Ohlebusch, C. Schleiermacher, J. Stoye, R. Giegerich posted to repeats bioinformatics algorithm by timflutre on 2009-11-02 21:48:48 as along with 2 people druvus yoanjacquemin
	A Novel Mechanism of Transposon-Mediated Gene Activation [My Copy] PLoS Genet, Vol. 5, No. 10. (16 October 2009), e1000689. by Zhongge Zhang, Milton H. Saier posted to repeats expression by djkt to the group iSEEM on 2009-11-02 19:02:57 as along with 1 person maren
	Progressive GAA·TTC Repeat Expansion in Human Cell Lines [My Copy] PLoS Genet, Vol. 5, No. 10. (30 October 2009), e1000704. by Scott Ditch, Mimi C. Sammarco, Ayan Banerjee, Ed Grabczyk posted to repeats disease by djkt on 2009-11-02 17:40:49 as
	Quantifying the mechanisms for segmental duplications in mammalian genomes by statistical analysis and modeling [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 11. (15 March 2005), pp. 4051-4056. by Yi Zhou, Bud Mishra posted to mammal segmental repeats modeling duplication by timflutre on 2009-10-27 22:16:53 as
	Computational Approaches and Tools Used in Identification of Dispersed Repetitive DNA Sequences [My Copy] Tropical Plant Biology, Vol. 1, No. 1. (1 March 2008), pp. 85-96. by Surya Saha, Susan Bridges, Zenaida Magbanua, Daniel Peterson posted to transposon repeats evolution annotation by operon on 2009-10-26 19:12:15 as along with 2 people natstreet druvus
	Genesis, effects and fates of repeats in prokaryotic genomes [My Copy] FEMS Microbiology Reviews, Vol. 33, No. 3. (2009), pp. 539-571. by Todd J. Treangen, Anne-Laure Abraham, Marie Touchon, Eduardo P. C. Rocha posted to transposon repeats evolution by operon on 2009-10-26 19:11:32 as along with 1 person druvus
	Repeated Sequences in DNA [My Copy] Science, Vol. 161, No. 3841. (09 August 1968), pp. 529-540. by R. J. Britten, D. E. Kohne posted to classic repeats genomics by timflutre on 2009-10-25 14:47:42 as
	Unexpected consequences of a sudden and massive transposon amplification on rice gene expression [My Copy] Nature, Vol. 461, No. 7267. (22 October 2009), pp. 1130-1134. by Ken Naito, Feng Zhang, Takuji Tsukiyama, et al.Hiroki Saito, C. Nathan Hancock, Aaron O. Richardson, Yutaka Okumoto, Takatoshi Tanisaka, Susan R. Wessler posted to repeats plants expression by djkt on 2009-10-21 22:20:34 as along with 3 people operon fenghezi bpcusack
	A transposon-induced epigenetic change leads to sex determination in melon [My Copy] Nature, Vol. 461, No. 7267. (22 October 2009), pp. 1135-1138. by Antoine Martin, Christelle Troadec, Adnane Boualem, et al.Mazen Rajab, Ronan Fernandez, Halima Morin, Michel Pitrat, Catherine Dogimont, Abdelhafid Bendahmane posted to sex repeats promoter plants expression epigenetics by djkt on 2009-10-21 22:14:59 as along with 3 people icq242500260 maren gderwin
	Processed pseudogenes: the ‘fossilized footprints’ of past gene expression [My Copy] Trends in Genetics, Vol. 25, No. 10. (30 October 2009), pp. 429-434. by Ondrej Podlaha, Jianzhi Zhang posted to rodents repeats reconstruction expression evolution development by djkt on 2009-10-21 18:49:04 as
	Antiretroelement activity of APOBEC3H was lost twice in recent human evolution. [My Copy] Cell host & microbe, Vol. 4, No. 3. (11 September 2008), pp. 249-259. by Molly OhAinle, Julie A. Kerns, Melody M. Li, Harmit S. Malik, Michael Emerman posted to repeats line-1 hiv evolution apobec antiretroelement by DrRichardBadge on 2009-10-19 12:32:41 as along with 2 people memerman kieran101
	Distinguishing Among Evolutionary Models for the Maintenance of Gene Duplicates [My Copy] J Hered, Vol. 100, No. 5. (1 September 2009), pp. 605-617. by Matthew W. Hahn posted to transposon repeats population genetics evolutionary_models evolutionary_adaptation duplication by DrRichardBadge on 2009-10-19 09:01:42 as along with 2 people xianjun operon
	Origins and functional impact of copy number variation in the human genome [My Copy] Nature In Nature, Vol. advance online publication (07 October 2009) by Donald F. Conrad, Dalila Pinto, Richard Redon, et al.Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, Chris Barnes, Peter Campbell, Tomas Fitzgerald, Min Hu, Chun H. Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy W. Pang, Sam Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler-Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles posted to variation retrotransposons repeats recombination number line-1 copy alu by DrRichardBadge on 2009-10-18 22:12:33 as along with 21 people and 1 group n00c Zephyrus gthorisson vplagnol biovils psique chvlyl daed daforerog zufar jessopher operon colinveal frohike sf11 sameersoi polivares dswan qayub bpcusack rdiaz Journal picks
	Correcting base-assignment errors in repeat regions of shotgun assembly. [My Copy] IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM, Vol. 4, No. 1. (r 2007), pp. 54-64. by Degui Zhi, Uri Keich, Pavel Pevzner, Steffen Heber, Haixu Tang posted to tandem-repeats sequencing repeats euler assembly by n00c on 2009-10-13 20:22:18 as along with 2 people dakelley ojabado
	Efficient computation of absent words in genomic sequences [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (26 March 2008), 167. by Julia Herold, Stefan Kurtz, Robert Giegerich posted to suffix_trees repeats regulatory motif metrics genomics genome computational bioinformatics algorithms by kmdaily on 2009-10-08 22:51:06 as along with 3 people operon xili03 langmead
	Repeats and EST analysis for new organisms. [My Copy] BMC genomics, Vol. 9 (18 January 2008), 23. by Ketil Malde, Inge Jonassen posted to repeats est_clustering est by orzenil on 2009-10-08 02:58:43 as
	Identification of repeat structure in large genomes using repeat probability clouds [My Copy] Analytical Biochemistry, Vol. 380, No. 1. (01 September 2008), pp. 77-83. by W. Gu, T. Castoe, D. Hedges, M. Batzer, D. Pollock posted to human repeats bioinformatics by timflutre on 2009-10-07 09:13:37 as along with 2 people orzenil operon
	A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats [My Copy] IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 6, No. 2. (2009), pp. 180-189. by Todd J. Treangen, Aaron E. Darling, Guillaume Achaz, Mark A. Ragan, Xavier Messeguer, Eduardo P. C. Rocha posted to repeats alignment by druvus on 2009-10-06 16:03:01 as along with 1 person AaronDarling
	Gapped Extension for Local Multiple Alignment of Interspersed DNA Repeats [My Copy] Bioinformatics Research and Applications (2008), pp. 74-86. by Todd Treangen, Aaron Darling, Mark Ragan, Xavier Messeguer posted to repeats alignment by druvus on 2009-10-06 15:49:13 as
	Global analysis of DNA methylation and transcription of human repetitive sequences. [My Copy] Epigenetics : official journal of the DNA Methylation Society, Vol. 4, No. 5. (17 July 2009), pp. 339-350. by Béatrice Horard, Angéline Eymery, Geneviève Fourel, et al.Nikita Vassetzky, Jacques Puechberty, Gérard Roizes, Kevin Lebrigand, Pascal Barbry, Aurélie Laugraud, Christian Gautier, Elsa Ben B. Simon, Frédéric Devaux, Frédérique Magdinier, Claire Vourc'h, Eric Gilson posted to software repeats by inesdesantiago on 2009-10-03 02:11:15 as along with 2 people guhjy rschulz
	Many LINE1 elements contribute to the transcriptome of human somatic cells [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R100. by Sanjida Rangwala, Lili Zhang, Haig Kazazian posted to repeats expression by djkt on 2009-10-03 00:16:17 as along with 2 people operon natalia_martins
	RePS: a sequence assembler that masks exact repeats identified from the shotgun data. [My Copy] Genome research, Vol. 12, No. 5. (1 May 2002), pp. 824-831. by Jun Wang, Gane Ka-Shu K. Wong, Peixiang Ni, et al.Yujun Han, Xiangang Huang, Jianguo Zhang, Chen Ye, Yong Zhang, Jianfei Hu, Kunlin Zhang, Xin Xu, Lijuan Cong, Hong Lu, Xide Ren, Xiaoyu Ren, Jun He, Lin Tao, Douglas A. Passey, Jian Wang, Huanming Yang, Jun Yu, Songgang Li posted to tool tandem-repeats software reps repeats mask assembly assembler by n00c on 2009-09-28 15:42:47 as along with 3 people natstreet seb1 orzenil
	Comparative and functional characterization of intragenic tandem repeats in 10 Aspergillus genomes. [My Copy] Molecular biology and evolution, Vol. 26, No. 3. (1 March 2009), pp. 591-602. by John G. Gibbons, Antonis Rokas posted to repeats polymorphism cell_wall_genes cell_wall cell_surface aspergillus by stajich to the group Mycology on 2009-09-26 22:38:43 as along with 3 people operon Bio_Mike druvus
	Coding Tandem Repeats Generate Diversity in Aspergillus fumigatus Genes [My Copy] Eukaryotic Cell, Vol. 6, No. 8. (1 August 2007), pp. 1380-1391. by Emma Levdansky, Jacob Romano, Yona Shadkchan, et al.Haim Sharon, Kevin J. Verstrepen, Gerald R. Fink, Nir Osherov posted to repeats polymorphism cell_wall cell_surface aspergillus by stajich to the group Mycology on 2009-09-26 22:36:10 as along with 2 people gbenson druvus
	Next-Generation Sequencing Methods: Impact of Sequencing Accuracy on SNP Discovery [My Copy] Single Nucleotide Polymorphisms (2009), pp. 95-111. by Eugene Y. Chan posted to solexa snp-discovery snp resequencing repeats methods illumina helicos by n00c on 2009-09-26 01:49:02 as
	Repeats in genomic DNA: mining and meaning. [My Copy] Current opinion in structural biology, Vol. 8, No. 3. (June 1998), pp. 333-337. by J. Jurka posted to repeats by n00c on 2009-09-24 03:28:51 as along with 1 person orzenil
	RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (12 November 2008), 478. by James Hane, Richard Oliver posted to software repeats mutation bioinformatics by operon on 2009-09-18 17:55:54 as along with 2 people nlapalu jamselem
	The Evolutionary Origin of Man Can Be Traced in the Layers of Defunct Ancestral Alpha Satellites Flanking the Active Centromeres of Human Chromosomes [My Copy] PLoS Genet, Vol. 5, No. 9. (11 September 2009), e1000641. by Valery A. Shepelev, Alexander A. Alexandrov, Yuri B. Yurov, Ivan A. Alexandrov posted to repeats origin_of_man comparative_genomics by mspivako to the group Journal picks on 2009-09-15 16:06:34 as along with 2 people marywaye djkt
	REPuter: fast computation of maximal repeats in complete genomes [My Copy] Bioinformatics, Vol. 15, No. 5. (1 May 1999), pp. 426-427. by S. Kurtz, C. Schleiermacher posted to tandem-repeats reputer repeats palindromes genome by n00c on 2009-09-14 16:28:48 as along with 1 person ep161302
	Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA. [My Copy] Molecular cell, Vol. 35, No. 4. (28 August 2009), pp. 467-478. by Ling-Ling L. Chen, Gordon G. Carmichael posted to repeats noncoding-rna by inesdesantiago on 2009-09-11 20:17:40 as along with 1 person ashkelon13
	L1 retrotransposition in human neural progenitor cells [My Copy] Nature, Vol. 460, No. 7259. (05 August 2009), pp. 1127-1131. by Nicole G. Coufal, Jose L. Garcia-Perez, Grace E. Peng, et al.Gene W. Yeo, Yangling Mu, Michael T. Lovci, Maria Morell, K. Sue OâShea, John V. Moran, Fred H. Gage posted to stemcells repeats development by djkt on 2009-09-11 16:02:11 as along with 5 people and 1 group fenghezi gangcai biomcgary pkonings rschulz Journal picks
	How repetitive are genomes? [My Copy] BMC bioinformatics, Vol. 7 (22 December 2006), 541. by Bernhard Haubold, Thomas Wiehe posted to repeats genomics bioinformatics by timflutre on 2009-09-08 17:17:24 as along with 2 people treangen mtagaya
	Mobile elements create structural variation: Analysis of a complete human genome [My Copy] Genome Research, Vol. 19, No. 9. (13 September 2009), pp. 1516-1526. by Jinchuan Xing, Yuhua Zhang, Kyudong Han, et al.Abdel H. Salem, Shurjo K. Sen, Chad D. Huff, Qiong Zhou, Ewen F. Kirkness, Samuel Levy, Mark A. Batzer, Lynn B. Jorde posted to sv repeats indel human by djkt on 2009-09-02 23:32:04 as along with 10 people and 1 group operon n00c sameersoi APRegier dchughes fenghezi jandot Dulcinea natstreet JustinCrocker Journal picks
	Recurrent Tandem Gene Duplication Gave Rise to Functionally Divergent Genes in Drosophila [My Copy] Mol Biol Evol, Vol. 25, No. 7. (1 July 2008), pp. 1451-1458. by Chuanzhu Fan, Ying Chen, Manyuan Long posted to tandem repeats genomics evolution duplication drosophila by operon on 2009-08-29 20:04:17 as
	Tracking the past: Interspersed repeats in an extinct Afrotherian mammal, Mammuthus primigenius [My Copy] Genome Research, Vol. 19, No. 8. (August 2009), pp. 1384-1392. by Fangqing Zhao, Ji Qi, Stephan C. Schuster posted to transposon repeats mammoth genome_size by aprasad on 2009-08-26 14:52:27 as along with 2 people operon dchughes
	Genomic characterization of a repetitive motif strongly associated with developmental genes in Drosophila. [My Copy] BMC genomics, Vol. 4, No. 1. (16 December 2003) by Javier Costas, Cristina P. Vieira, Fernando Casares, Jorge Vieira posted to transposon repeats motif genomics drosophila by operon on 2009-08-21 08:57:29 as along with 1 person isimpson

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evolution	55
bioinformatics	46
transposon	34
genomics	33
sequence	28
protein	23
genome	21
indel	19
low	18
tandem	18
complexity	17
length	17
retrotransposon	16
genome_size	15
software	15
bat	14
gene	14
genome_evolution	13
human	12
transposable_element	12
duplication	11
expression	11
homopeptide	11
rpt	10
assembly	9
dna	9
review	9
algorithm	8
alu	8
crispr	8
plants	8
recombination	8
sines	8
variation	8
annotation	7
nucleosome	7
phylogenetics	7
tandem-repeats	7
composition	6
detection	6
elements	6
geneticspaper	6
histone	6
polymorphism	6
alignment	5
chromatin	5
chromosome	5
drosophila	5
line-1	5
ltr	5
master	5
modification	5
prion	5
promoter	5
regulatory-elements	5
te	5
tool	5
yeast	5
aspergillus	4
cell_surface	4
cell_wall	4
codon	4
comparative_genomics	4
lines	4
mammal	4
methylation	4
mutation	4
neurospora	4
plant	4
primates	4
proteins	4
rearrangements	4
saccharomyces	4
sequencing	4
str	4
structure	4
transcription	4
transposable_elements	4
tree	4
blocs	3
cell_wall_genes	3
comparative	3
enhancer	3
epigenetics	3
eukaryotic	3
h3k27me3	3
h4k20me3	3
low-complexity_regions	3
malaria	3
mammalian	3
mammals	3
methods	3
model	3
multiple	3
nucleosome-positioning	3
regulatory	3
splicing	3
ssr	3
v-gene	3
whole_genome	3

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