Tag retrotransposon [120 articles] Export

Recent papers classified by the tag retrotransposon.

	Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae [My Copy] Cytogenetic and Genome Research, Vol. 110, No. 1-4. (2005), pp. 229-241. by M. A. Grandbastien, C. Audeon, E. Bonnivard, et al.J. M. Casacuberta, B. Chalhoub, A. P. P. Costa, Q. H. Le, D. Melayah, M. Petit, C. Poncet, S. M. Tam, M. A. Van Sluys, C. Mhiri posted to transposable_element stress retrotransposon regulation plant by timflutre on 2009-11-18 09:48:31 as along with 2 people dandaman ArtemPankin
	Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice. [My Copy] Genome research, Vol. 16, No. 10. (October 2006), pp. 1262-1269. by Benoit Piegu, Romain Guyot, Nathalie Picault, et al.Anne Roulin, Abhijit Saniyal, Hyeran Kim, Kristi Collura, Darshan S. Brar, Scott Jackson, Rod A. Wing, Olivier Panaud posted to transposable_element rice retrotransposon polyploidy by timflutre on 2009-11-11 11:27:14 as along with 2 people sbottani aprasad
	p53 responsive elements in human retrotransposons [My Copy] Oncogene, Vol. 28, No. 44. (31 August 2009), pp. 3857-3865. by C. R. Harris, A. DeWan, A. Zupnick, et al.R. Normart, A. Gabriel, C. Prives, A. J. Levine, J. Hoh posted to retrotransposon repetitive_elements repeat p53 line by tonamswish on 2009-11-05 14:00:17 as
	A novel active endogenous retrovirus family contributes to genome variability in rat inbred strains [My Copy] Genome Research (3 November 2009) by Yongming Wang, FrantiÅ¡ek LiÅ¡ka, Claudia Gosele, et al. Edovã¡, VladimÃr Kren, DrahomÃra KrenovÃ¡, Zoltan Ivics, Norbert Hubner, Zsuzsanna Izsvak posted to retrovirus retrotransposon retrotransposition endogenous-retrovirus by dchughes on 2009-11-04 22:26:08 as
	Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes. [My Copy] Genome research, Vol. 14, No. 4. (April 2004), pp. 517-527. by Shan Yang, Arian F. Smit, Scott Schwartz, et al.Francesca Chiaromonte, Krishna M. Roskin, David Haussler, Webb Miller, Ross C. Hardison posted to retrotransposon comparative-analysis by dchughes on 2009-11-04 17:15:09 as
	In search of polymorphic Alu insertions with restricted geographic distributions. [My Copy] Genomics, Vol. 90, No. 1. (July 2007), pp. 154-158. by Richard Cordaux, Deepa Srikanta, Jungnam Lee, Mark Stoneking, Mark A. Batzer posted to retrotransposon forensic ethnicity by dchughes on 2009-10-30 20:55:25 as
	Mobile element-based forensic genomics. [My Copy] Mutation research, Vol. 616, No. 1-2. (1 March 2007), pp. 24-33. by David A. Ray, Jerilyn A. Walker, Mark A. Batzer posted to retrotransposon retrotransposition forensic by dchughes on 2009-10-29 23:11:41 as
	Reading between the LINEs to see into the past [My Copy] Trends in Genetics (16 October 2009) by David A. Ray, Roy N. Platt, Mark A. Batzer posted to retrotransposon retrotransposition line_1 line by dchughes on 2009-10-28 11:08:19 as along with 1 person operon
	Dasheng and RIRE2. A Nonautonomous Long Terminal Repeat Element and Its Putative Autonomous Partner in the Rice Genome [My Copy] Plant Physiol., Vol. 130, No. 4. (1 December 2002), pp. 1697-1705. by Ning Jiang, I. King Jordan, Susan R. Wessler posted to transposable_element rpt rice retrotransposon genomics by timflutre on 2009-10-05 11:08:36 as
	Wnt-mediated activation of NeuroD1 and retro-elements during adult neurogenesis [My Copy] Nature Neuroscience, Vol. 12, No. 9. (23 August 2009), pp. 1097-1105. by Tomoko Kuwabara, Jenny Hsieh, Alysson Muotri, et al.Gene Yeo, Masaki Warashina, Dieter C. Lie, Lynne Moore, Kinichi Nakashima, Makoto Asashima, Fred H. Gage posted to retrotransposon promoter neuroscience neuron line_1 l1 by dchughes on 2009-09-21 13:25:45 as along with 1 person fenghezi
	Retrotransposons revisited: the restraint and rehabilitation of parasites. [My Copy] Cell, Vol. 135, No. 1. (3 October 2008), pp. 23-35. by John L. Goodier, Haig H. Kazazian posted to retrotransposon retrotransposition exaptation by dchughes on 2009-09-17 15:02:43 as along with 4 people diamantis gwallau sebastien_vigneau operon
	Allan Award Lecture: on jumping fields and "jumping genes". [My Copy] American journal of human genetics, Vol. 84, No. 2. (February 2009), pp. 105-114. by Haig H. Kazazian posted to retrotransposon retrotransposition by dchughes on 2009-09-17 15:01:54 as
	Exonization of active mouse L1s: a driver of transcriptome evolution? [My Copy] BMC genomics, Vol. 8 (26 October 2007), 392. by Tomasz Zemojtel, Tobias Penzkofer, Jörg Schultz, Thomas Dandekar, Richard Badge, Martin Vingron posted to retrotransposon retrotransposition line l1 by dchughes on 2009-09-16 13:54:56 as along with 3 people and 1 group cisevol paulcartwright FMoncini BergmanLab
	Mobile elements create structural variation: Analysis of a complete human genome [My Copy] Genome Research, Vol. 19, No. 9. (13 September 2009), pp. 1516-1526. by Jinchuan Xing, Yuhua Zhang, Kyudong Han, et al.Abdel H. Salem, Shurjo K. Sen, Chad D. Huff, Qiong Zhou, Ewen F. Kirkness, Samuel Levy, Mark A. Batzer, Lynn B. Jorde posted to sine retrotransposon retrotransposition line human-variation by dchughes on 2009-09-02 13:09:48 as along with 10 people and 1 group operon n00c djkt sameersoi APRegier fenghezi jandot Dulcinea natstreet JustinCrocker Journal picks
	Retrotransposon overdose and genome integrity. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 33. (18 August 2009), pp. 13927-13932. by Lisa Z. Scheifele, Gregory J. Cost, Margaret L. Zupancic, Emerita M. Caputo, Jef D. Boeke posted to retrotransposon retrotransposition by dchughes on 2009-08-19 11:02:37 as along with 1 person operon
	Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes. [My Copy] Genes & development, Vol. 20, No. 13. (1 July 2006), pp. 1732-1743. by Toshiaki Watanabe, Atsushi Takeda, Tomoyuki Tsukiyama, et al.Kazuyuki Mise, Tetsuro Okuno, Hiroyuki Sasaki, Naojiro Minami, Hiroshi Imai posted to testes small-rna sirna retrotransposon piwi oocyte germline by sebastien_vigneau on 2009-08-18 16:12:47 as along with 2 people mtagaya zhanghuiqiong
	Retrotransposable elements and human disease. [My Copy] Genome dynamics, Vol. 1 (2006), pp. 104-115. by P. A. Callinan, M. A. Batzer posted to retrovirus retrotransposon retrotransposition retrogene by dchughes on 2009-08-18 13:01:10 as
	Are transposable elements simply silenced or are they under house arrest? [My Copy] Trends in genetics : TIG, Vol. 25, No. 8. (02 August 2009), pp. 333-334. by Christian Biémont posted to transposon retrotransposon retrotransposition by dchughes on 2009-08-17 11:36:59 as along with 2 people venancio jamselem
	Evolutionary Origin and Functions of Retrogene Introns [My Copy] Mol Biol Evol, Vol. 26, No. 9. (1 September 2009), pp. 2147-2156. by Marie Fablet, Manuel Bueno, Lukasz Potrzebowski, Henrik Kaessmann posted to retrotransposon retrotransposition retrogene by dchughes on 2009-08-14 11:28:56 as along with 4 people inesdesantiago operon rschulz clearbluespring
	The LTR retrotransposon micropia in the cardini group of Drosophila (Diptera: Drosophilidae): a possible case of horizontal transfer [My Copy] Genetica, Vol. 134, No. 3. (1 November 2008), pp. 335-344. by Juliana Cordeiro, Lizandra Robe, Élgion Loreto, Vera Valente posted to cardini drosophila horizontal_transfer ltr micropia retrotransposon by gwallau on 2009-08-10 23:57:05 as along with 2 people jlncdr lizbiogen
	L1 retrotransposition in human neural progenitor cells [My Copy] Nature, Vol. 460, No. 7259. (05 August 2009), pp. 1127-1131. by Nicole G. Coufal, Jose L. Garcia-Perez, Grace E. Peng, et al.Gene W. Yeo, Yangling Mu, Michael T. Lovci, Maria Morell, K. Sue OâShea, John V. Moran, Fred H. Gage posted to brain l1 line retrotransposon by rschulz on 2009-08-10 10:43:02 as along with 5 people and 1 group djkt fenghezi gangcai biomcgary pkonings Journal picks
	Diverse fates of paralogs following segmental duplication of telomeric genes. [My Copy] Genomics, Vol. 84, No. 2. (August 2004), pp. 239-247. by Andrew Wong, Eric J. Vallender, Konstantina Heretis, et al.Yesim Ilkin, Bruce T. Lahn, Christa Lese L. Martin, David H. Ledbetter posted to f379 mir retrotransposon by dchughes on 2009-08-06 15:29:19 as
	Tracking the past: Interspersed repeats in an extinct Afrotherian mammal, Mammuthus primigenius [My Copy] Genome Research, Vol. 19, No. 8. (August 2009), pp. 1384-1392. by Fangqing Zhao, Ji Qi, Stephan C. Schuster posted to retrotransposition retrotransposon by dchughes on 2009-08-04 13:17:54 as along with 2 people operon aprasad
	Plant retrotransposons: Turned on by stress [My Copy] Current Biology, Vol. 6, No. 8. (August 1996), pp. 959-961. by S. Wessler posted to plant_stress retrotransposon by orzenil on 2009-08-04 02:30:46 as
	Distinct retroelement classes define evolutionary breakpoints demarcating sites of evolutionary novelty. [My Copy] BMC genomics, Vol. 10, No. 1. (24 July 2009), 334. by Mark S. Longo, Dawn M. Carone, NISC Comparative Sequencing Program, Eric D. Green, Michael J. O'Neill, Rachel J. O'Neill posted to breakpoints centromere nisc retrotransposon by aprasad on 2009-07-31 15:53:15 as along with 1 person nuin
	Genome dynamics and chromosomal localization of the non-LTR retrotransposons Rex1 and Rex3 in Antarctic fish [My Copy] Antarctic Science, Vol. 16, No. 01. (2004), pp. 51-57. by Z. Catherine Ozouf Costa, T. Jürgen Brand, G. Cornelia Körtin, et al.O. Eva Pisan, O. Céline Bonill, U. Jean Pierre Coutancea, F. Jean Nicolas Volf posted to chromosomal_localization genomic-dynamics non-ltr retrotransposon rex1 rex3 by gwallau on 2009-07-31 14:46:22 as
	Retrotransposons, reverse transcriptase and the genesis of new genetic information. [My Copy] Gene (21 July 2009) by Ilaria Sciamanna, Patrizia Vitullo, Angela Curatolo, Corrado Spadafora posted to epigenetics retrotranscription retrotransposon sperm by rschulz on 2009-07-29 11:51:50 as
	Global analysis of DNA methylation and transcription of human repetitive sequences. [My Copy] Epigenetics : official journal of the DNA Methylation Society, Vol. 4, No. 5. (17 July 2009), pp. 339-350. by Béatrice Horard, Angéline Eymery, Geneviève Fourel, et al.Nikita Vassetzky, Jacques Puechberty, Gérard Roizes, Kevin Lebrigand, Pascal Barbry, Aurélie Laugraud, Christian Gautier, Elsa Ben B. Simon, Frédéric Devaux, Frédérique Magdinier, Claire Vourc'h, Eric Gilson posted to dna-methylation epigenetics human medip microarray repeat retrotransposon transcription transposon by rschulz on 2009-07-29 09:03:48 as along with 2 people inesdesantiago guhjy
	Unraveling genetic regulatory networks of mammalian retroelements. [My Copy] BMC proceedings, Vol. 3 Suppl 2 (2009) by K. S. Ramos posted to retrotransposon by guhjy on 2009-07-25 15:25:46 as
	Mammalian non-LTR retrotransposons: For better or worse, in sickness and in health [My Copy] Genome Research, Vol. 18, No. 3. (1 March 2008), pp. 343-358. by Victoria P. Belancio, Dale J. Hedges, Prescott Deininger posted to retrotransposon by guhjy on 2009-07-25 15:24:05 as along with 2 people operon dchughes
	Regulation of mammalian gene expression by retroelements and non-coding tandem repeats. [My Copy] BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 30, No. 4. (April 2008), pp. 338-348. by N. V. Tomilin posted to retrotransposon by guhjy on 2009-07-25 14:29:27 as along with 3 people inesdesantiago operon FMoncini
	The regulated retrotransposon transcriptome of mammalian cells [My Copy] Nature Genetics, Vol. 41, No. 5. (19 April 2009), pp. 563-571. by Geoffrey J. Faulkner, Yasumasa Kimura, Carsten O. Daub, et al.Shivangi Wani, Charles Plessy, Katharine M. Irvine, Kate Schroder, Nicole Cloonan, Anita L. Steptoe, Timo Lassmann, Kazunori Waki, Nadine Hornig, Takahiro Arakawa, Hazuki Takahashi, Jun Kawai, Alistair R. R. Forrest, Harukazu Suzuki, Yoshihide Hayashizaki, David A. Hume, Valerio Orlando, Sean M. Grimmond, Piero Carninci posted to cage retrotransposon by guhjy on 2009-07-25 14:27:39 as along with 13 people and 2 groups inesdesantiago gdb galka8_diploma tonamswish renatomilani cisevol robfsouza dchughes mtagaya fenghezi jbhiatt natstreet antonkratz cis-regulatory-evolution BergmanLab
	APE-type non-LTR retrotransposons: determinants involved in target site recognition [My Copy] Cytogenetic and Genome Research, Vol. 110, No. 1-4. (2005), pp. 250-268. by N. Zingler, O. Weichenrieder, G. G. Schumann posted to ape non-ltr retrotransposon by gwallau on 2009-07-23 19:07:26 as
	Origin, evolution, and distribution of different groups of non-LTR retrotransposons among eukaryotes [My Copy] Russian Journal of Genetics, Vol. 45, No. 2. (1 February 2009), pp. 129-138. by O. Novikova, A. Blinov posted to distribution eukaryotes evolution non-ltr retrotransposon by gwallau on 2009-07-23 01:03:49 as
	Horizontal transfer of non-LTR retrotransposons in vertebrates [My Copy] Genetica, Vol. 107, No. 1. (1 December 1999), pp. 121-128. by Dušsan Kordišs, Franc Gubenšsek posted to non-ltr retrotransposon vertebrates horizontal_transmission horizontal_transfer by gwallau on 2009-07-23 01:02:14 as
	Evolution of Tom, 297, 17.6 and rover retrotransposons in Drosophilidae species [My Copy] Molecular Genetics and Genomics by Newton Vidal, Adriana Ludwig, Elgion Loreto posted to 176 drosophilidae rover tom retrotransposon by gwallau on 2009-07-21 20:23:25 as
	Development of retrotransposon primers and their utilization for germplasm identification in Diospyros spp. (Ebenaceae) [My Copy] Tree Genetics & Genomes, Vol. 5, No. 1. (1 January 2009), pp. 235-245. by Xiaoyun Du, Qinglin Zhang, Zhengrong Luo posted to experimental retrotransposon by orzenil on 2009-07-08 16:03:37 as
	Retrotransposon silencing and telomere integrity in somatic cells of Drosophila depends on the cytosine-5 methyltransferase DNMT2. [My Copy] Nature genetics (3 May 2009) by Sameer Phalke, Olaf Nickel, Diana Walluscheck, Frank Hortig, Maria Cristina C. Onorati, Gunter Reuter posted to dnmt drosophila retrotransposon by tonamswish on 2009-06-16 19:45:39 as along with 2 people and 1 group clearbluespring cisevol BergmanLab
	mRNA Retrotransposition Coupled with 5' Inversion as a Possible Source of New Genes [My Copy] Mol Biol Evol, Vol. 26, No. 6. (1 June 2009), pp. 1405-1420. by Kenji K. Kojima, Norihiro Okada posted to l1 retrotransposition retrotransposon by dchughes on 2009-05-12 11:39:24 as along with 4 people operon djkt bpcusack clearbluespring
	The Take and Give Between Retrotransposable Elements and their Hosts [My Copy] Annual Review of Genetics, Vol. 42, No. 1. (2008), pp. 587-617. by Arthur Beauregard, M. Joan Curcio, Marlene Belfort posted to repeat retrotransposon by tonamswish on 2009-04-13 14:07:36 as along with 4 people jrhill gdb cambray timflutre
	Solanum lycopersicum cv. Heinz 1706 chromosome 6: distribution and abundance of genes and retrotransposable elements. [My Copy] The Plant journal : for cell and molecular biology (4 March 2009) by Sander A A. Peters, Erwin Datema, Dóra Szinay, et al.Marjo J J. van Staveren, Elio G W M G. Schijlen, Jan C C. van Haarst, Thamara Hesselink, Marleen H C H. Abma-Henkens, Yuling Bai, Hans de Jong, Willem J J. Stiekema, René M M. Klein Lankhorst, Roeland C H J C. van Ham posted to genome_annotation potato_tomato retrotransposon by orzenil on 2009-04-08 18:00:51 as
	Whole-genome association studies of sporadic amyotrophic lateral sclerosis: are retroelements involved? [My Copy] Trends in Molecular Medicine, Vol. 15, No. 4. (April 2009), pp. 148-158. by Jean-Luc Mougeot, Stephanie Richardson-Milazi, Benjamin R. Brooks posted to als retrogene retrotransposition retrotransposon retrovirus by dchughes on 2009-04-07 12:48:57 as
	The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species [My Copy] Molecular Genetics and Genomics by M. Manetti, M. Rossi, M. Nakabashi, M. Grandbastien, Marie Van Sluys posted to copy estimation number plasmid real-time retrotransposon sybr by ArtemPankin to the group Khavkin's lab on 2009-03-17 16:21:24 as along with 1 person orzenil
	A retroposon analysis of Afrotherian phylogeny. [My Copy] Molecular biology and evolution, Vol. 22, No. 9. (September 2005), pp. 1823-1833. by H. Nishihara, Y. Satta, M. Nikaido, J. G. Thewissen, M. J. Stanhope, N. Okada posted to afrotheria phylogenetics rare_genomic_characters retrotransposon by aprasad on 2009-03-05 14:57:22 as
	Active Alu retrotransposons in the human genome [My Copy] Genome Research, Vol. 18, No. 12. (December 2008), pp. 1875-1883. by E. Andrew Bennett, Heiko Keller, Ryan E. Mills, et al.Steffen Schmidt, John V. Moran, Oliver Weichenrieder, Scott E. Devine posted to alu human-genome human-variation retrotransposition retrotransposon by dchughes on 2009-01-29 14:49:08 as along with 3 people and 1 group muumuulibrarian skoch3 operon Koch_Lab
	Recombination of Retrotransposon and Exogenous RNA Virus Results in Nonretroviral cDNA Integration [My Copy] Science, Vol. 323, No. 5912. (16 January 2009), pp. 393-396. by Markus B. Geuking, Jacqueline Weber, Marie Dewannieux, et al.Elieser Gorelik, Thierry Heidmann, Hans Hengartner, Rolf M. Zinkernagel, Lars Hangartner posted to recombination retrotransposon by gwallau on 2009-01-21 14:55:09 as along with 5 people and 2 groups jbhiatt burnettjc wsjames kieran101 lizbiogen Oxford Virology LabDros
	Analysis of the platypus genome suggests a transposon origin for mammalian imprinting [My Copy] Genome Biology, Vol. 10 (02 January 2009), R1. by Andrew, Marilyn B. Renfree posted to epigenetics evolution host-defense imprinting platypus repeat retrotransposon transposon by rschulz to the group Imprinting on 2009-01-07 16:42:33 as along with 5 people djkt inesdesantiago bpcusack epigenetics PaulFlook
	Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome [My Copy] Genome Research, Vol. 19, No. 2. (24 February 2009), pp. 243-254. by Regina S. Baucom, James C. Estill, Jim Leebens-Mack, Jeffrey L. Bennetzen posted to retrotransposon rice by orzenil on 2008-12-22 00:30:23 as along with 3 people operon epigenetics natstreet
	Genome-scale DNA methylation maps of pluripotent and differentiated cells [My Copy] Nature, Vol. 454, No. 7205. (06 July 2008), pp. 766-770. by Alexander Meissner, Tarjei S. Mikkelsen, Hongcang Gu, et al.Marius Wernig, Jacob Hanna, Andrey Sivachenko, Xiaolan Zhang, Bradley E. Bernstein, Chad Nusbaum, David B. Jaffe, Andreas Gnirke, Rudolf Jaenisch, Eric S. Lander posted to bisulfite cgi cpg deep-seq dna-methylation mouse neuron promoter retrotransposon stemcell tissue-specific transposon by rschulz on 2008-12-06 11:02:41 as along with 14 people and 1 group aprickett saravana jmstat mmartin christoffpale guhjy jernst jfr mrochman gdb jasonflannick inesdesantiago djkt wsjames Oxford Virology
	The necessary junk: new functions for transposable elements [My Copy] Hum. Mol. Genet., Vol. 16, No. R2. (15 October 2007), pp. R159-167. by Alysson R. Muotri, Maria C. N. Marchetto, Nicole G. Coufal, Fred H. Gage posted to exaptation retrotransposition retrotransposon transposon by dchughes on 2008-11-06 15:17:13 as along with 7 people and 2 groups operon TimRooney sbottani andreasapostolides gpappas RaquelSL ArtemPankin BergmanLab Khavkin's lab

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retrotransposition	58
transposon	21
line	17
repeats	16
sine	14
epigenetics	11
l1	9
molecular-phylogenetics	8
repeat	8
alu	7
evolution	7
retrogene	7
exaptation	6
avian	5
genome	5
genome_size	5
imprinting	5
ltr	5
methylation	5
retrovirus	5
rice	5
dna	4
dna-methylation	4
exonisation	4
human	4
intron	4
intron-size	4
marsupial	4
non-ltr	4
plant	4
primates	4
review	4
sperm	4
transcription	4
transposable_element	4
alu-exonisation	3
cell	3
core-sine	3
de-novo-gene-evolution	3
dnmt3l	3
drosophila	3
erv	3
evolutionary-genomics	3
exon-shuffling	3
fusion-genes	3
genome_evolution	3
germ	3
host-defense	3
iap	3
intron-loss	3
male	3
marsupial-mammal	3
mir	3
monodelphis-domestica	3
neuron	3
platypus	3
promoter	3
regulation	3
silencing	3
bioinformatics	2
bisulfite	2
cgi	2
comparative_genomics	2
copy	2
cpg	2
deep-seq	2
estimation	2
forensic	2
genome-evolution	2
genomics	2
horizontal_transfer	2
human-variation	2
jc	2
line_1	2
mouse	2
mutation	2
neuroscience	2
number	2
phylogenetics	2
piwi	2
plasmid	2
polyploidy	2
rare_genomic_characters	2
real-time	2
saccharomyces	2
sirna	2
stemcell	2
stress	2
sybr	2
te	2
tissue-specific	2
transposable_elements	2
chromatin	1
endogenous-retrovirus	1
herv	1
limb-development	1
primate	1
recombination	1
rex3	1
sry	1

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