Tag rhodopsin [163 articles] Export

Recent papers classified by the tag rhodopsin.

	A G protein-coupled receptor at work: the rhodopsin model. [My Copy] Trends in biochemical sciences, Vol. 34, No. 11. (15 November 2009), pp. 540-552. by Klaus Peter P. Hofmann, Patrick Scheerer, Peter W. Hildebrand, et al.Hui-Woog W. Choe, Jung Hee H. Park, Martin Heck, Oliver P. Ernst posted to rhodopsin review gpcr activation by xdeupi on 2009-11-09 14:10:06 as along with 1 person lymxz
	Retinylidene Ligand Structure in Bovine Rhodopsin, Metarhodopsin-I, and 10-Methylrhodopsin from Internuclear Distance Measurements Using 13C-Labeling and 1-D Rotational Resonance MAS NMR† [My Copy] Biochemistry, Vol. 38, No. 35. (1 August 1999), pp. 11316-11324. by P. J. E. Verdegem, P. H. M. Bovee-Geurts, W. J. de Grip, J. Lugtenburg, H. J. M. de Groot posted to rhodopsin retinal nmr metai induced_fit activation by xdeupi on 2009-11-06 10:42:33 as
	Visual pigment: G-protein-coupled receptor for light signals [My Copy] Cellular and Molecular Life Sciences, Vol. 54, No. 12. (19 December 1998), pp. 1299-1315. by Y. Shichida, H. Imai posted to rhodopsin review pathway energy_landscape activation by xdeupi on 2009-10-29 11:43:58 as
	Rhodopsin: Structure, signal transduction and oligomerisation [My Copy] The International Journal of Biochemistry & Cell Biology, Vol. 41, No. 4. (April 2009), pp. 721-724. by Michael B. Morris, Siavoush Dastmalchi, Bret W. Church posted to rhodopsin g_proteins by ckenaley on 2009-10-21 16:10:04 as along with 1 person LaetitiaBigot
	Photocurrents Generated by Bacteriorhodopsin Adsorbed on Nano-Black Lipid Membranes [My Copy] Biophysical Journal, Vol. 89, No. 2. (August 2005), pp. 1046-1054. by C. Horn posted to spectroscopy slb rhodopsin pore membrane lipid electrophysiology bilayer aluminium by Buntworthy on 2009-10-08 18:16:40 as
	Retinal dynamics during light activation of rhodopsin revealed by solid-state NMR spectroscopy. [My Copy] Biochimica et biophysica acta (28 August 2009) by Michael F. Brown, Gilmar F. Salgado, Andrey V. Struts posted to rhodopsin retinal nmr activation by xdeupi on 2009-10-06 19:22:22 as
	Structural and kinetic modeling of an activating helix switch in the rhodopsin-transducin interface. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 26. (30 June 2009), pp. 10660-10665. by Patrick Scheerer, Martin Heck, Andrean Goede, et al.Jung Hee H. Park, Hui-Woog W. Choe, Oliver P. Ernst, Klaus Peter P. Hofmann, Peter W. Hildebrand posted to transducin switch structure rhodopsin modeling kinetics helix activation by xdeupi on 2009-10-06 18:16:43 as
	Rhodopsin activation switches in a native membrane environment. [My Copy] Photochemistry and photobiology, Vol. 85, No. 2. (r 2009), pp. 437-441. by Steffen Lüdeke, Mohana Mahalingam, Reiner Vogel posted to switch rhodopsin activation by xdeupi on 2009-10-06 18:12:45 as
	Structural and dynamic effects of cholesterol at preferred sites of interaction with rhodopsin identified from microsecond length molecular dynamics simulations. [My Copy] Proteins, Vol. 76, No. 2. (1 August 2009), pp. 403-417. by George Khelashvili, Alan Grossfield, Scott E. Feller, Michael C. Pitman, Harel Weinstein posted to theory rhodopsin md cholesterol by xdeupi on 2009-10-06 18:06:55 as along with 1 person and 1 group sobolevnrm baker-group
	On the origins of arrestin and rhodopsin. [My Copy] BMC evolutionary biology, Vol. 8 (29 July 2008), 222. by Carlos E. Alvarez posted to rhodopsin evolution arrestin by xdeupi on 2009-10-06 18:03:23 as along with 1 person ckenaley
	Location of the retinal chromophore in the activated state of rhodopsin. [My Copy] The Journal of biological chemistry*, Vol. 284, No. 15. (10 April 2009), pp. 10190-10201. by Shivani Ahuja, Evan Crocker, Markus Eilers, et al.Viktor Hornak, Amiram Hirshfeld, Martine Ziliox, Natalie Syrett, Philip J. Reeves, H. Gobind Khorana, Mordechai Sheves, Steven O. Smith posted to rhodopsin retinal nmr activation by xdeupi on 2009-10-06 01:16:33 as
	Helix movement is coupled to displacement of the second extracellular loop in rhodopsin activation. [My Copy] Nature structural & molecular biology, Vol. 16, No. 2. (01 February 2009), pp. 168-175. by Shivani Ahuja, Viktor Hornak, Elsa C. Yan, et al.Natalie Syrett, Joseph A. Goncalves, Amiram Hirshfeld, Martine Ziliox, Thomas P. Sakmar, Mordechai Sheves, Philip J. Reeves, Steven O. Smith, Markus Eilers posted to rhodopsin nmr ecl2 activation by xdeupi on 2009-10-06 01:12:54 as
	6-s-cis Conformation and Polar Binding Pocket of the Retinal Chromophore in the Photoactivated State of Rhodopsin. [My Copy] Journal of the American Chemical Society (1 October 2009) by Shivani Ahuja, Markus Eilers, Amiram Hirshfeld, et al.Elsa C. Yan, Martine Ziliox, Thomas P. Sakmar, Mordechai Sheves, Steven O. Smith posted to rhodopsin retinal nmr activation by xdeupi on 2009-10-06 01:12:06 as
	Location of Trp265 in metarhodopsin II: implications for the activation mechanism of the visual receptor rhodopsin. [My Copy] Journal of molecular biology, Vol. 357, No. 1. (17 March 2006), pp. 163-172. by Evan Crocker, Markus Eilers, Shivani Ahuja, et al.Viktor Hornak, Amiram Hirshfeld, Mordechai Sheves, Steven O. Smith posted to trp tm6 rhodopsin nmr activation by xdeupi on 2009-10-06 00:45:51 as along with 1 person viktor21614
	Structural waters define a functional channel mediating activation of the GPCR, rhodopsin [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 34. (2009), pp. 14367-14372. by Thomas E. Angel, Sayan Gupta, Beata Jastrzebska, Krzysztof Palczewski, Mark R. Chance posted to rhodopsin internal-water gpcr by agrossfield on 2009-10-05 17:29:17 as
	Anabaena Sensory Rhodopsin: A Photochromic Color Sensor at 2.0 A [My Copy] Science, Vol. 306, No. 5700. (19 November 2004), pp. 1390-1393. by Lutz Vogeley, Oleg A. Sineshchekov, Vishwa D. Trivedi, Jun Sasaki, John L. Spudich, Hartmut Luecke posted to rhodopsin bacteria by robfsouza on 2009-09-17 17:24:20 as
	Crystal Structure of the Anabaena Sensory Rhodopsin Transducer [My Copy] Journal of Molecular Biology, Vol. 367, No. 3. (30 March 2007), pp. 741-751. by Lutz Vogeley, Vishwa D. Trivedi, Oleg A. Sineshchekov, Elena N. Spudich, John L. Spudich, Hartmut Luecke posted to structure rhodopsin by robfsouza on 2009-09-17 17:22:43 as
	Structural waters define a functional channel mediating activation of the GPCR, rhodopsin. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 34. (25 August 2009), pp. 14367-14372. by Thomas E. Angel, Sayan Gupta, Beata Jastrzebska, Krzysztof Palczewski, Mark R. Chance posted to rhodopsin internal-water by agrossfield on 2009-08-28 14:05:00 as along with 1 person xdeupi
	Coarse-grained modeling of allosteric regulation in protein receptors [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 34. (25 August 2009), pp. 14253-14258. by Ilya A. Balabin, Weitao Yang, David N. Beratan posted to rhodopsin gpcr coarse-grain b2ar by agrossfield on 2009-08-28 14:04:12 as along with 4 people and 1 group sobolevnrm pmung jmccammon okapi McCammon
	The Anabaena sensory rhodopsin transducer defines a novel superfamily of prokaryotic small-molecule binding domains [My Copy] Biology Direct, Vol. 4, No. 1. (14 August 2009), 25. by Robson De Souza, Lakshminarayan Iyer, L. Aravind posted to rhodopsin protein family evolution domain bacteria aravind by robfsouza on 2009-08-26 21:13:49 as
	G protein-coupled receptor rhodopsin: a prospectus. [My Copy] Annual review of physiology, Vol. 65 (2003), pp. 851-879. by Sławomir Filipek, Ronald E. Stenkamp, David C. Teller, Krzysztof Palczewski posted to rhodopsin gpcr by LaetitiaBigot on 2009-08-26 10:28:46 as along with 1 person and 1 group karthikram Neoscientists
	Rhodopsin: a prototypical G protein-coupled receptor. [My Copy] Progress in nucleic acid research and molecular biology, Vol. 59 (1998), pp. 1-34. by T. P. Sakmar posted to rhodopsin gpcr by LaetitiaBigot on 2009-08-26 10:24:40 as
	Organization of the G protein-coupled receptors rhodopsin and opsin in native membranes. [My Copy] The Journal of biological chemistry, Vol. 278, No. 24. (13 June 2003), pp. 21655-21662. by Yan Liang, Dimitrios Fotiadis, Slawomir Filipek, David A. Saperstein, Krzysztof Palczewski, Andreas Engel posted to rhodopsin opsin membrane gpcr by LaetitiaBigot on 2009-08-26 09:57:38 as along with 2 people tkershaw IrinaMoreira
	Crystal Structure of Rhodopsin: A G Protein-Coupled Receptor [My Copy] Science, Vol. 289, No. 5480. (4 August 2000), pp. 739-745. by Krzysztof Palczewski, Takashi Kumasaka, Tetsuya Hori, et al.Craig A. Behnke, Hiroyuki Motoshima, Brian A. Fox, Isolde L. Trong, David C. Teller, Tetsuji Okada, Ronald E. Stenkamp, Masaki Yamamoto, Masashi Miyano posted to structure rhodopsin crystal by LaetitiaBigot on 2009-08-25 16:53:05 as along with 3 people leocmcheung tkershaw IrinaMoreira
	Rhodopsin: Structural Basis of Molecular Physiology [My Copy] Physiol. Rev., Vol. 81, No. 4. (1 October 2001), pp. 1659-1688. by Santosh T. Menon, May Han, Thomas P. Sakmar posted to rhodopsin physiology molecular by LaetitiaBigot on 2009-08-25 16:42:18 as along with 1 person vahmurk
	Structural Mimicry in G Protein-Coupled Receptors: Implications of the High-Resolution Structure of Rhodopsin for Structure-Function Analysis of Rhodopsin-Like Receptors [My Copy] Mol Pharmacol, Vol. 60, No. 1. (1 July 2001), pp. 1-19. by Juan A. Ballesteros, Lei Shi, Jonathan A. Javitch posted to structure rhodopsin gpcr by LaetitiaBigot on 2009-08-25 16:33:40 as along with 1 person IrinaMoreira
	Thermal Decay of Rhodopsin: Role of Hydrogen Bonds in Thermal Isomerization of 11-cis Retinal in the Binding Site and Hydrolysis of Protonated Schiff Base [My Copy] Journal of the American Chemical Society, Vol. 131, No. 25. (1 July 2009), pp. 8750-8751. by Jian Liu, Monica Y. Liu, Jennifer B. Nguyen, Aditi Bhagat, Victoria Mooney, Elsa C. Y. Yan posted to isomerization retinal rhodopsin schiff thermal by marissalee on 2009-08-04 02:57:57 as
	Channelrhodopsin-2 is a leaky proton pump [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 30. (28 July 2009), pp. 12317-12322. by Katrin Feldbauer, Dirk Zimmermann, Verena Pintschovius, Julia Spitz, Christian Bamann, Ernst Bamberg posted to channel feldba09pdf leak proton rhodopsin by paulschlesinger on 2009-07-29 00:39:16 as
	Lateral diffusion of rhodopsin in photoreceptor cells measured by fluorescence photobleaching and recovery [My Copy] Biophysical Journal, Vol. 33, No. 2. (February 1981), pp. 225-232. by C. Wey posted to constant diffusion lateral rhodopsin wey81pdf by paulschlesinger on 2009-06-26 23:08:52 as
	Lateral diffusion of rhodopsin in the photoreceptor membrane [My Copy] Nature, Vol. 247, No. 5441. (15 February 1974), pp. 438-441. by Mu-Ming Poo, Richard A. Cone posted to diffusion lateral membranes poo74pdf rapid rhodopsin by paulschlesinger on 2009-06-26 23:03:32 as along with 1 person gabe_rosser
	Conserved waters mediate structural and functional activation of family A (rhodopsin-like) G protein-coupled receptors [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 21. (2009), pp. 8555-8560. by Thomas E. Angel, Mark R. Chance, Krzysztof Palczewski posted to internal-water rhodopsin by agrossfield on 2009-06-16 18:06:28 as
	Phospholipids Are Needed for the Proper Formation, Stability, and Function of the Photoactivated Rhodopsin−Transducin Complex [My Copy] Biochemistry, Vol. 48, No. 23. (16 June 2009), pp. 5159-5170. by Beata Jastrzebska, Anna Goc, Marcin Golczak, Krzysztof Palczewski posted to gpcr rhodopsin by agrossfield on 2009-06-12 02:09:09 as
	Conformational Changes of Channelrhodopsin-2 [My Copy] Journal of the American Chemical Society, Vol. 0, No. 0. (0000) by Ionela Radu, Christian Bamann, Melanie Nack, Georg Nagel, Ernst Bamberg, Joachim Heberle posted to rhodopsin spectroscopy by WFPaxton on 2009-05-07 22:20:35 as
	Large-scale analysis of gene structure in rhodopsin-like GPCRs: evidence for widespread loss of an ancient intron [My Copy] Gene, Vol. 338, No. 1. (18 August 2004), pp. 15-23. by Robert J. Bryson-Richardson, Darren W. Logan, Peter D. Currie, Ian J. Jackson posted to gpcr rhodopsin by yuslinaz on 2009-04-22 07:09:09 as
	Exploratory experimentation and scientific practice: metagenomics and the proteorhodopsin case. [My Copy] History and philosophy of the life sciences, Vol. 29, No. 3. (2007), pp. 337-360. by M. A. O'Malley posted to community-genomics exploratory-experimentation rhodopsin by jmeppley on 2009-04-16 15:49:49 as along with 1 person and 1 group Thaverkamp Microbial-Ecology
	Dynamics of the Internal Water Molecules in Squid Rhodopsin [My Copy] Biophysical Journal, Vol. 96, No. 7. (08 April 2009), pp. 2572-2576. by Eduardo Jardón-Valadez, Ana-Nicoleta Bondar, Douglas J. Tobias posted to protein-hydration rhodopsin by agrossfield on 2009-04-08 18:11:00 as
	Fourier transform infrared difference spectroscopy of rhodopsin mutants: light activation of rhodopsin causes hydrogen-bonding change in residue aspartic acid-83 during meta II formation. [My Copy] Biochemistry, Vol. 32, No. 39. (5 October 1993), pp. 10277-10282. by P. Rath, L. L. DeCaluwé, P. H. Bovee-Geurts, W. J. DeGrip, K. J. Rothschild posted to activation d250 protonation rhodopsin spectroscopy switch by xdeupi on 2009-03-20 11:55:44 as
	Protonation states of membrane-embedded carboxylic acid groups in rhodopsin and metarhodopsin II: a Fourier-transform infrared spectroscopy study of site-directed mutants. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 90, No. 21. (1 November 1993), pp. 10206-10210. by K. Fahmy, F. Jäger, M. Beck, T. A. Zvyaga, T. P. Sakmar, F. Siebert posted to activation d250 protonation rhodopsin spectroscopy switch by xdeupi on 2009-03-20 11:48:33 as
	Low-frequency vibrational modes and infrared absorbance of red, blue and green opsin. [My Copy] Journal of molecular modeling, Vol. 15, No. 8. (August 2009), pp. 959-969. by Saravana Prakash P. Thirumuruganandham, Herbert M. Urbassek posted to dynamics mode modeling normal opsin rhodopsin theoretical by gcaltabiano on 2009-02-10 07:49:39 as along with 2 people xdeupi saravan
	Crystal structure of the ligand-free G-protein-coupled receptor opsin [My Copy] Nature, Vol. 454, No. 7201. (10 July 2008), pp. 183-187. by Jung H. Park, Patrick Scheerer, Klaus P. Hofmann, Hui-Woog Choe, Oliver P. Ernst posted to activation active-state crystallography gpcr npxxy pro-kink rhodopsin structure by xdeupi on 2009-01-28 10:28:21 as along with 2 people reyez mrasch
	Crystal structure of opsin in its G-protein-interacting conformation [My Copy] Nature, Vol. 455, No. 7212. (2008), pp. 497-502. by Patrick Scheerer, Jung H. Park, Peter W. Hildebrand, et al.Yong J. Kim, Norbert Krausz, Hui-Woog Choe, Klaus P. Hofmann, Oliver P. Ernst posted to activation active-state crystallography dry gpcr rhodopsin structure by xdeupi on 2009-01-28 09:53:31 as along with 5 people and 1 group IrinaMoreira zwang reyez stajich neils Mycology
	Constitutive activation of G protein-coupled receptors and diseases: Insights into mechanisms of activation and therapeutics [My Copy] Pharmacology & Therapeutics, Vol. 120, No. 2. (November 2008), pp. 129-148. by Y. Tao posted to activation cg fshr gpcr lhr review rhodopsin tmd tsh tshr by gcaltabiano to the group LabCompMed on 2009-01-23 10:53:17 as
	Crystal structure of squid rhodopsin [My Copy] Nature, Vol. 453, No. 7193., pp. 363-367. by Midori Murakami, Tsutomu Kouyama posted to crystallography rhodopsin xray by xdeupi on 2009-01-16 00:50:52 as along with 2 people agrossfield neils
	Three-Layer ONIOM Studies of the Dark State of Rhodopsin: The Protonation State of Glu181 [My Copy] Journal of Molecular Biology, Vol. 383, No. 1. (31 October 2008), pp. 106-121. by K. Hall, T. Vreven, M. Frisch, M. Bearpark posted to 081218 qmmm rhodopsin spectrum by vahmurk on 2008-12-17 22:13:10 as
	<i>Ab initio</i>, tight-binding and QM/MM calculations of the rhodopsin chromophore in its binding pocket [My Copy] Phase Transitions, Vol. 77, No. 1. (2004), pp. 31-45. by M. Sugihara, V. Buss, P. Entel, et al.J. Hafner, A. N. Bondar, M. Elstner, T. Frauenheim posted to 081218 md photoisomeration protein qm qmmm rhodopsin spectrum water by vahmurk on 2008-12-17 21:34:39 as
	Two protonation switches control rhodopsin activation in membranes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (7 November 2008) by Mohana Mahalingam, Karina Martínez-Mayorga, Michael F F. Brown, Reiner Vogel posted to activation dry ii mechanism membrane meta metarhodopsin rhodopsin switch tmd by gcaltabiano on 2008-11-18 07:52:32 as
	Monitoring the Conformational Changes of Photoactivated Rhodopsin from Μicroseconds to Seconds by Transient Fluorescence Spectroscopy [My Copy] Biochemistry, Vol. 47, No. 44. (4 November 2008), pp. 11518-11527. by Daniel Hoersch, Harald Otto, Ingrid Wallat, Maarten P. Heyn posted to rhodopsin by agrossfield on 2008-10-30 18:55:00 as
	Transducer Binding Establishes Localized Interactions to Tune Sensory Rhodopsin II [My Copy] Structure, Vol. 16, No. 8. (06 August 2008), pp. 1206-1213. by D. Cisneros, L. Oberbarnscheidt, A. Pannier, et al.J. Klare, J. Helenius, M. Engelhard, F. Oesterhelt, D. Muller posted to archaea interaction natronomonas protein-protein rhodopsin single-molecule by neils on 2008-10-08 02:43:20 as
	E113 Is Required for the Efficient Photoisomerization of the Unprotonated Chromophore in a UV-Absorbing Visual Pigment [My Copy] Biochemistry, Vol. 47, No. 41. (14 October 2008), pp. 10829-10833. by Kei Tsutsui, Hiroo Imai, Yoshinori Shichida posted to rhodopsin by agrossfield on 2008-10-07 15:52:06 as
	Structure, initial excited-state relaxation, and energy storage of rhodopsin resolved at the multiconfigurational perturbation theory level [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 52. (28 December 2004), pp. 17908-17913. by Tadeusz Andruniów, Nicolas Ferré, Massimo Olivucci posted to 081006 mechanism photoisomeration qm rhodopsin structure by vahmurk on 2008-10-06 11:38:28 as

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activation	106
gpcr	69
structure	57
md	28
crystallography	27
retinal	22
membrane	21
gproteins	19
review	19
switch	19
nmr	18
dynamics	17
modeling	16
protein	15
qmmm	11
tm6	11
binding	10
fluorescence	10
dimer	9
active-state	8
cterm	8
pdb	8
protonation	8
toggle	8
w648	8
helix	7
theory	7
vision	7
agonist	6
icl3	6
me	6
mechanism	6
b2ar	5
d250	5
membrane_proteins	5
mutation	5
photoisomeration	5
pigments	5
water	5
aggregation	4
bimane	4
dry	4
ligands	4
lipids	4
retinitispigmentosa	4
sequence	4
ser	4
spectroscopy	4
spectrum	4
thyrotropin	4
tm3	4
tm5	4
transmembrane	4
xray	4
arrestin	3
bacteria	3
double-bond	3
evolution	3
internal-water	3
npxxy	3
prediction	3
pro-kink	3
tmd	3
081006	2
081218	2
amber	2
bacteriorhodopsin	2
brown	2
cation-pi	2
cg	2
cholesterol	2
chromophore	2
coherent	2
control	2
development	2
dha	2
diffusion	2
disulfide	2
folding	2
fshr	2
hbond	2
hydrophobic	2
imaging	2
ionic	2
lateral	2
lhr	2
lock	2
monomer	2
olfactory	2
opsin	2
pca	2
pharmacology	2
poket	2
qm	2
retina	2
retinal_binding_proteins	2
signal-transduction	2
tsh	2
tshr	2
light	1

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