Tag rna_seq [20 articles] Export

Recent papers classified by the tag rna_seq.

	Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 24. (15 December 2009), pp. 3207-3212. by Jacob F. Degner, John C. Marioni, Athma A. Pai, et al.Joseph K. Pickrell, Everlyne Nkadori, Yoav Gilad, Jonathan K. Pritchard posted to rna_seq allele_specific_expression by jherrero68 to the group Journal picks on 2009-12-21 10:22:56 as along with 10 people and 1 group djkt jperkins humburg dakelley natstreet chvlyl n00c papamicd torfinnnome heliopais Orengo Group Journal Picks
	Searching for SNPs with cloud computing [My Copy] Genome Biology, Vol. 10, No. 11. (20 November 2009), R134. by Ben Langmead, Michael Schatz, Jimmy Lin, Mihai Pop, Steven Salzberg posted to snps rna_seq by maren on 2009-12-20 00:16:48 as along with 15 people and 2 groups phoenixzxl robertrentzsch daforerog greg dullhunk coela oinizan owenlancaster natstreet druvus kshameer jamesmorris jandot neils n00c Orengo Group Journal Picks Journal picks
	The transcriptional landscape of the yeast genome defined by RNA sequencing. [My Copy] Science (New York, N.Y.) In Science, Vol. 320, No. 5881. (6 June 2008), pp. 1344-1349. by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, et al.Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder posted to rna_seq by danbolser on 2009-12-16 12:36:18 as along with 25 people and 1 group hzoltan bartjacobse GustavoLacerda debasis dbensasson cfvillalta rdowell poschm jmcq waszak michaelbarton djkt urgi stajich semrich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack guhjy shurjo Mycology
	RNA-Seq: a revolutionary tool for transcriptomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to transcriptomics rna_seq review method gene_expression by ngehlenborg on 2009-11-23 14:19:27 as along with 43 people and 1 group bsamal zufar hongkeun_park hzoltan sandfire maren jwfoley urgi RNA-protein cthachuk heliopais GustavoLacerda rdiaz TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto burak natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor CUBES
	Direct RNA sequencing [My Copy] Nature, Vol. 461, No. 7265. (23 September 2009), pp. 814-818. by Fatih Ozsolak, Adam R. Platt, Dan R. Jones, et al.Jeffrey G. Reifenberger, Lauryn E. Sass, Peter McInerney, John F. Thompson, Jayson Bowers, Mirna Jarosz, Patrice M. Milos posted to rna_seq by manduca on 2009-11-12 04:40:53 as along with 20 people and 2 groups pmalkus hzoltan gotgenes jwfoley GeeSharpMinor mlc39 colinveal reyez TRHvidsten djkt ppgardne dchughes heliopais vingron nzm n00c lp2 toni_marco dswan kinestetika Journal picks Bioinformatics - CRUK
	Transcriptome sequencing to detect gene fusions in cancer. [My Copy] Nature, Vol. 458, No. 7234. (5 March 2009), pp. 97-101. by Christopher A. Maher, Chandan Kumar-Sinha, Xuhong Cao, et al.Shanker Kalyana-Sundaram, Bo Han, Xiaojun Jing, Lee Sam, Terrence Barrette, Nallasivam Palanisamy, Arul M. Chinnaiyan posted to rna_seq by manduca on 2009-11-12 04:29:16 as along with 18 people fishtank hzoltan stubrown ajbattle frohike torfinnnome jessopher guhjy jfr burak myzhang inesdesantiago dswan fenghezi jbhiatt mtagaya abizar xingxu
	Digital drug discovery. [My Copy] Genome biology, Vol. 6, No. 10. (2005) by Michael A. Goldman posted to rna_seq by manduca on 2009-11-12 01:20:04 as
	Is sequencing enlightenment ending the dark age of the transcriptome? [My Copy] Nature Methods, Vol. 6, No. 10. (01 October 2009), pp. 711-713. by Piero Carninci posted to rna_seq by maren on 2009-09-29 19:31:24 as along with 5 people inesdesantiago heliopais n00c druvus megraw
	Limitations and possibilities of small RNA digital gene expression profiling [My Copy] Nature Methods In Nat Meth, Vol. 6, No. 7. (01 July 2009), pp. 474-476. by Sam E. V. Linsen, Elzo de Wit, Georges Janssens, et al.Sheila Heater, Laura Chapman, Rachael K. Parkin, Brian Fritz, Stacia K. Wyman, Ewart de Bruijn, Emile E. Voest, Scott Kuersten, Muneesh Tewari, Edwin Cuppen posted to rna_seq by timhubbard to the group RGASP on 2009-07-14 23:05:47 as along with 9 people and 1 group manduca jfr vingron pengchy guhjy lp2 stajich gdb fpattyn Mycology
	Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach [My Copy] BMC Genomics, Vol. 7 (29 September 2006), 246. by Matthew N. Bainbridge, Rene L. Warren, Martin Hirst, et al.Tammy Romanuik, Thomas Zeng, Anne Go, Allen Delaney, Malachi Griffith, Matthew Hickenbotham, Vincent Magarini, Elaine R. Mardis, Marianne D. Sadar, Asim S. Siddiqui, Marco A. Marra, Steven J. M. Jones posted to 454 rna_seq sequencing by caseybrown on 2008-11-11 03:40:19 as along with 1 person usagi-kirin
	Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. [My Copy] Nucleic acids research, Vol. 36, No. 21. (1 December 2008), e141. by Peter A. 't Hoen, Yavuz Ariyurek, Helene H. Thygesen, et al.Erno Vreugdenhil, Rolf H. Vossen, Renée X. de Menezes, Judith M. Boer, Gert-Jan J. van Ommen, Johan T. den Dunnen posted to expression_array rna_seq by caseybrown on 2008-11-10 18:39:13 as along with 26 people zufar manduca hzoltan GustavoLacerda stubrown GeeSharpMinor n00c guhjy hcoller daed poschm stsaft azazello jfr slevy03 felsani usagi-kirin shikin coela cthachuk ojabado abizar natstreet druvus rschulz pengchy
	Optimal spliced alignments of short sequence reads. [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i174-180. by Fabio De Bona, Stephan Ossowski, Korbinian Schneeberger, Gunnar Rätsch posted to rna_seq sequencing short_read_analysis splicing by caseybrown on 2008-09-24 03:01:15 as along with 13 people and 1 group ongenetics GustavoLacerda darshan n00c natstreet druvus lukaswindhager malcook jmcq nmohelli cthachuk Ema Neeperando SIMR bioinformatics
	Gene expression profiling by massively parallel sequencing [My Copy] Genome research In Genome Research, Vol. 18, No. 1. (21 January 2008), pp. 172-177. by Tatiana T. Torres, Muralidhar Metta, Birgit OttenwÃ¤lder, Christian SchlÃ¶tterer posted to 454 rna_seq sequencing transcription by caseybrown on 2008-07-08 16:30:20 as along with 20 people chriscole oannes hzoltan manduca n00c druvus daed floatingpoint inesdesantiago orzenil guhjy jfr dchughes stsaft echinotrix giovanni ghattem idonaldson ohara gracio
	RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted to method rna_seq sequencing transcription by caseybrown on 2008-07-08 16:03:24 as along with 49 people and 3 groups sotacam AndersI zufar cthachuk hzoltan jwfoley heliopais debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto huali n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 jfr dakelley Ema balicea vega lusk semrich vmarshal fpattyn stajich giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda CPI UU SIMR bioinformatics Mycology
	Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution. [My Copy] Nature, Vol. 453, No. 7199. (26 June 2008), pp. 1239-1243. by Brian T. Wilhelm, Samuel Marguerat, Stephen Watt, et al.Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J. Penkett, Jane Rogers, Jürg Bähler posted to rna_seq sequencing transcription yeast by caseybrown on 2008-07-08 16:00:08 as along with 14 people and 1 group hzoltan manduca jmcq natstreet n00c TRHvidsten poschm michaelbarton myourshaw djkt jonathanjacobs GeeSharpMinor guhjy semrich Molecular Biology
	Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis [My Copy] Cell, Vol. 133, No. 3. (2 May 2008), pp. 523-536. by Ryan Lister, Ronan C. O'Malley, Julian Tonti-Filippini, et al.Brian D. Gregory, Charles C. Berry, Harvey A. Millar, Joseph R. Ecker posted to arabidopsis rna_seq sequencing transcription by caseybrown on 2008-07-08 15:59:17 as along with 7 people natstreet mmartin kengg megraw GeeSharpMinor jmjimenez gdb
	Mapping and quantifying mammalian transcriptomes by RNA-Seq [My Copy] Nature Methods In Nat Meth, Vol. 5, No. 7. (30 May 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to rna_seq sequencing solid transcription by caseybrown on 2008-07-08 15:11:54 as along with 44 people and 2 groups cajunsushi davidmam manduca cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	Stem cell transcriptome profiling via massive-scale mRNA sequencing [My Copy] Nature Methods, Vol. 5, No. 7. (30 May 2008), pp. 613-619. by Nicole Cloonan, Alistair R. R. Forrest, Gabriel Kolle, et al.Brooke B. A. Gardiner, Geoffrey J. Faulkner, Mellissa K. Brown, Darrin F. Taylor, Anita L. Steptoe, Shivangi Wani, Graeme Bethel, Alan J. Robertson, Andrew C. Perkins, Stephen J. Bruce, Clarence C. Lee, Swati S. Ranade, Heather E. Peckham, Jonathan M. Manning, Kevin J. McKernan, Sean M. Grimmond posted to rna_seq sequencing stem_cell transcription by caseybrown on 2008-07-08 15:11:14 as along with 22 people manduca hzoltan jwfoley heliopais jmanning2k stubrown cassj n00c burak natstreet poschm felsani jbhiatt vplagnol rschulz umit myourshaw megraw inesdesantiago GeeSharpMinor guhjy gdb
	A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. [My Copy] Science (New York, N.Y.), Vol. 321, No. 5891. (15 August 2008), pp. 956-960. by M. Sultan, M. H. Schulz, H. Richard, et al.A. Magen, A. Klingenhoff, M. Scherf, M. Seifert, T. Borodina, A. Soldatov, D. Parkhomchuk, D. Schmidt, S. O'Keeffe, S. Haas, M. Vingron, H. Lehrach, M. L. Yaspo posted to method rna_seq sequencing transcription by caseybrown on 2008-07-03 23:17:24 as along with 28 people and 2 groups hzoltan zufar eszczurek n00c dna inesdesantiago ilyashl TRHvidsten poschm bertelsen ivanek guhjy wutongbin jfr raistrick gracio xingxu psique oelemento Ema reyez kjglennie dh0000 GeeSharpMinor balicea djkt ArtemPankin zwang BenosLab Khavkin's lab
	Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. [My Copy] Genome research, Vol. 18, No. 4. (19 April 2008), pp. 610-621. by Ryan D. Morin, Michael D. O'Connor, Malachi Griffith, et al.Florian Kuchenbauer, Allen Delaney, Anna-Liisa L. Prabhu, Yongjun Zhao, Helen McDonald, Thomas Zeng, Martin Hirst, Connie J. Eaves, Marco A. Marra posted to mirna rna_seq sequencing by caseybrown on 2008-06-12 21:08:22 as along with 11 people and 2 groups hzoltan giovenko ealloza fishtank inesdesantiago GustavoLacerda heliopais stajich maralena jfr gdb microRNA Mycology

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sequencing	11
transcription	8
method	4
454	3
bioinformatics	3
transcriptomics	3
allele_specific_expression	2
functional_genomics	2
gene_expression	2
next_gen_sequencing	2
solexa	2
solid	2
yeast	2
arabidopsis	1
bioinformatics_software	1
chip_seq	1
evolution	1
evolutionary_genomics	1
expression_array	1
genome_assembly	1
genome_sequencing	1
metagenomics	1
mirna	1
resequencing	1
review	1
selected_by_david	1
short_read_analysis	1
snps	1
splicing	1
stem_cell	1
transcriptome	1

Tag rna_seq [20 articles] Export

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