Tag robustness [at least 200 articles] Export

Recent papers classified by the tag robustness.

	Degeneracy: A design principle for achieving robustness and evolvability [My Copy] Journal of Theoretical Biology (17 November 2009) by James Whitacre, Axel Bender posted to robustness model evolvability degeneracy conceptual by VGreiff on 2009-11-27 09:16:37 as
	The multi-step phosphorelay mechanism of unorthodox two-component systems in E. coli realizes ultrasensitivity to stimuli while maintaining robustness to noises. [My Copy] Computational biology and chemistry, Vol. 30, No. 6. (December 2006), pp. 438-444. by Jeong-Rae R. Kim, Kwang-Hyun H. Cho posted to two-component_system simulation sensitivity robustness phosphorylation noise mathematical_model e_coli bacteria by jjray on 2009-11-19 18:06:21 as
	Robustness of the noise-induced phase synchronization in a general class of limit cycle oscillators. [My Copy] Physical review letters, Vol. 93, No. 20. (12 November 2004) by Jun-Nosuke N. Teramae, Dan Tanaka posted to robustness oscillation neuroscience by yyfwuhan on 2009-11-11 15:32:27 as
	The yeast cell-cycle network is robustly designed [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 14. (6 April 2004), pp. 4781-4786. by Fangting Li, Tao Long, Ying Lu, Qi Ouyang, Chao Tang posted to robustness cell_cycle by karthikraman on 2009-11-11 13:51:57 as along with 9 people amozeika Dangerfc ajitkumar22 tomhebbron behindtherabbit jmenche eldan timflutre jiny
	Surviving heat shock: Control strategies for robustness and performance [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 8. (22 February 2005), pp. 2736-2741. by H. El-Samad, H. Kurata, J. C. Doyle, C. A. Gross, M. Khammash posted to robustness control_architectures control by karthikraman on 2009-11-11 13:34:38 as along with 4 people jporternj monod madhadron jjray
	Architecture-Dependent Noise Discriminates Functionally Analogous Differentiation Circuits [My Copy] Vol. 139, No. 3. (30 October 2009), pp. 512-522. by Tolga Çaatay, Marc Turcotte, Michael B. Elowitz, Jordi Garcia-Ojalvo, Gürol M. Süel posted to time_lapse single_cell robustness phenotype noise network functional_differences fluctuations circuit_architectures by mstumpf on 2009-11-04 05:16:50 as along with 1 person balabu
	Architecture-Dependent Noise Discriminates Functionally Analogous Differentiation Circuits [My Copy] Cell, Vol. 139, No. 3. (30 October 2009), pp. 512-522. by Tolga Çağatay, Marc Turcotte, Michael B. Elowitz, Jordi Garcia-Ojalvo, Gürol M. Süel posted to stochastic robustness noise network gene_regulation dynamics development bacteria by jjray on 2009-11-03 21:37:58 as along with 4 people maren dbikard samubernard venancio
	Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments [My Copy] (23 Oct 2009) by Ramon Grima posted to stochastic robustness noise kinetics intracellular enzyme biophysics by jjray on 2009-10-26 23:46:26 as along with 1 person apocapoc
	Robustness: mechanisms and consequences [My Copy] Trends in Genetics, Vol. 25, No. 9. (28 September 2009), pp. 395-403. by Joanna Masel, Mark L. Siegal posted to robustness review by heliopais on 2009-10-19 15:58:12 as along with 3 people abhishek_tiwari qwermish brembs
	Basis of robustness and resilience in the suprachiasmatic nucleus: individual neurons form nodes in circuits that cycle daily. [My Copy] Journal of biological rhythms, Vol. 24, No. 5. (October 2009), pp. 340-352. by Matthew P. Butler, Rae Silver posted to system_resilience suprachiasmatic_nuclei robustness circadian_oscillators by samubernard on 2009-10-18 12:54:51 as
	'Glocal' Robustness Analysis and Model Discrimination for Circadian Oscillators [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (16 October 2009), e1000534. by Marc Hafner, Heinz Koeppl, Martin Hasler, Andreas Wagner posted to robustness circadian by samubernard on 2009-10-18 12:09:03 as along with 1 person reyez
	Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism [My Copy] Nature Genetics, Vol. 37, No. 6. (08 May 2005), pp. 636-640. by Eliane Fischer, Uwe Sauer posted to robustness metabolic_networks by yyfwuhan on 2009-10-15 17:35:47 as along with 1 person Norlins
	Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 101. by Ramon Grima posted to systemsbiology robustness by abhishek_tiwari on 2009-10-14 13:28:55 as along with 2 people colinveal jaia
	Capacity of Ad Hoc wireless networks [My Copy] In MobiCom '01: Proceedings of the 7th annual international conference on Mobile computing and networking (2001), pp. 61-69. by Jinyang Li, Charles Blake, Douglas S. J. De Couto, Hu I. Lee, Robert Morris posted to wireless-network wireless robustness qos network modeling-and-simulation modeling mesh-network mesh manet hoc gw_positioning capacity adhoc ad-hoc ad 80211 by hgfernan on 2009-10-13 19:58:56 as along with 14 people and 4 groups Guoxian raywang ejones greenw rajiv balicea eldaly erl kkoehne pratap simon_o gixgax Grauel s-fujii SFI-SGL Thesis uwmesh METRIK
	Proteomic shifts in embryonic stem cells with gene dose modifications suggest the presence of balancer proteins in protein regulatory networks. [My Copy] PloS one, Vol. 2, No. 11. (2007) by Lei Mao, Claus Zabel, Marion Herrmann, et al.Tobias Nolden, Florian Mertes, Laetitia Magnol, Caroline Chabert, Daniela Hartl, Yann Herault, Jean Maurice M. Delabar, Thomas Manke, Heinz Himmelbauer, Joachim Klose posted to robustness by bpcusack on 2009-10-12 17:09:40 as
	High-dimensional and large-scale phenotyping of yeast mutants. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 52. (27 December 2005), pp. 19015-19020. by Yoshikazu Ohya, Jun Sese, Masashi Yukawa, et al.Fumi Sano, Yoichiro Nakatani, Taro L. Saito, Ayaka Saka, Tomoyuki Fukuda, Satoru Ishihara, Satomi Oka, Genjiro Suzuki, Machika Watanabe, Aiko Hirata, Miwaka Ohtani, Hiroshi Sawai, Nicolas Fraysse, Jean-Paul P. Latgé, Jean M. François, Markus Aebi, Seiji Tanaka, Sachiko Muramatsu, Hiroyuki Araki, Kintake Sonoike, Satoru Nogami, Shinichi Morishita posted to robustness chaperones by bpcusack on 2009-10-12 10:42:14 as along with 9 people nicholasflann taroleo pauldobson czeller sesejun yeastyboy cjeans jiny guhjy
	Computing of Applied Digital Ecosystems [My Copy] (5 Oct 2009) by G. Briscoe, P. De Wilde posted to compsci simulation robustness metaphor hardware ecology by livingthingdan on 2009-10-10 23:42:35 as
	Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 42. (20 October 2009), pp. 17835-17840. by Misook Ha, Jie Lu, Lu Tian, et al.Vanitharani Ramachandran, Kristin D. Kasschau, Elisabeth J. Chapman, James C. Carrington, Xuemei Chen, Xiu-Jie Wang, Z. Jeffrey Chen posted to robustness microrna duplication by bpcusack on 2009-10-09 12:29:09 as along with 1 person megraw
	Thermodynamic Limit of a Nonequilibrium Steady State: Maxwell-Type Construction for a Bistable Biochemical System [My Copy] Physical Review Letters, Vol. 103, No. 14. (2009), 148103. by Hao Ge, Hong Qian posted to thermodynamics systems-biology stochastic steady-state stability robustness nonequilibrium multi-scale model macroscopic fluctuation emergent-properties chemical-master-equation cell-biology biochemical by bertelsen on 2009-10-06 21:06:38 as along with 1 person jjray
	Encouraging Effective Democratic Competition [My Copy] East European Politics and Societies, Vol. 21, No. 1. (1 February 2007), pp. 91-110. by Anna Grzymala-Busse posted to vote_share robustness party_competition new_democracies incentives governments good_governance corruption constituency coalitions coalition_partners by emilianionita on 2009-10-03 13:44:42 as
	Reverse Engineering of Biological Complexity [My Copy] Science, Vol. 295, No. 5560. (1 March 2002), pp. 1664-1669. by Marie E. Csete, John C. Doyle posted to modularity_hierachy robustness review by yyfwuhan on 2009-10-02 14:47:35 as along with 24 people and 6 groups tomhebbron abhishek_tiwari jdscheff jporternj Scis0000002 reyez camster snuppepuppan barry monod lyongu wnpx ddahlem dullhunk adepace javierFellow livingthingdan kevinemamy anatiferous timflutre dbilar jrbanga edvin bayesian dbk-lab structural_bioinformatics Bioinformatics EisenLab livingthing clab
	The origins and evolution of functional modules: lessons from protein complexes. [My Copy] Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Vol. 361, No. 1467. (29 March 2006), pp. 507-517. by Jose B. Pereira-Leal, Emmanuel D. Levy, Sarah A. Teichmann posted to robustness protein-protein_interaction network_evolution network module_rewiring module modularity essentiality by biomcgary on 2009-09-30 21:50:29 as along with 6 people saket agustinarce bicko choonpeng cjeans cmzmasek
	Congruent evolution of genetic and environmental robustness in micro-RNA. [My Copy] Molecular biology and evolution, Vol. 26, No. 4. (23 April 2009), pp. 867-874. by Gergely J. Szöllosi, Imre Derényi posted to robustness by bpcusack on 2009-09-28 10:27:22 as along with 2 people druvus valeriehilgers
	Direct evolution of genetic robustness in microRNA. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 17. (25 April 2006), pp. 6593-6598. by Elhanan Borenstein, Eytan Ruppin posted to robustness microrna by bpcusack on 2009-09-27 14:12:36 as along with 3 people eckart_bindewald braingrind borens
	A Method for determining the dobustness of bio-molecular oscillator models [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 95. by Reza Ghaemi, Jing Sun, Pablo Iglesias, Domitilla Del Vecchio posted to robustness by abhishek_tiwari on 2009-09-24 09:37:33 as along with 1 person agonzale
	Asymmetric disassembly and robustness in declining networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 43. (28 October 2008), pp. 16466-16471. by Serguei Saavedra, Felix Reed-Tsochas, Brian Uzzi posted to robustness regrowth preferential disassembly attachment asymmetric by normaali on 2009-09-22 13:48:04 as along with 2 people jmenche kshundyak
	The Survival of the Fittest and the Reign of the Most Robust: In Biology and Elsewhere [My Copy] Minds and Machines by Alfons Schuster, Yoko Yamaguchi posted to survival robustness optimal_systems nature by djsaab on 2009-09-20 18:16:11 as
	Protein robustness promotes evolutionary innovations on large evolutionary time-scales. [My Copy] Proceedings. Biological sciences / The Royal Society, Vol. 275, No. 1643. (22 July 2008), pp. 1595-1602. by Evandro Ferrada, Andreas Wagner posted to robustness by bpcusack on 2009-09-16 15:58:22 as
	A general computational method for robustness analysis with applications to synthetic gene networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 12. (15 June 2009), pp. i169-178. by Aurélien Rizk, Gregory Batt, François Fages, Sylvain Soliman posted to robustness by abhishek_tiwari on 2009-09-09 15:04:25 as along with 2 people pinney colmryan
	A system biology approach to robustness analysis of circadian rhythm [My Copy] Control, Communications and Signal Processing, 2004. First International Symposium on In Control, Communications and Signal Processing, 2004. First International Symposium on (2004), 185. by F. J. Doyle posted to robustness by abhishek_tiwari on 2009-09-09 14:12:28 as
	Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 987-994. by Yung-Keun Kwon, Kwang-Hyun Cho posted to robustness by abhishek_tiwari on 2009-09-09 13:57:33 as along with 4 people guhjy grahamc shigepong bootsy
	Input–output robustness in simple bacterial signaling systems [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 50. (11 December 2007), pp. 19931-19935. by Guy Shinar, Ron Milo, María R. Martínez, Uri Alon posted to robustness by abhishek_tiwari on 2009-09-09 13:42:34 as along with 5 people ajitkumar22 yonatanf jjray madhadron Ema
	Innovation and robustness in complex regulatory gene networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 34. (21 August 2007), pp. 13591-13596. by S. Ciliberti, O. C. Martin, A. Wagner posted to robustness by abhishek_tiwari on 2009-09-09 13:41:17 as along with 12 people and 3 groups mjoach ocs benjaminsb balicea dakelley cmzmasek dlobo jmenche dpollard sebastien_vigneau zwang cisevol GEB EisenLab cis-regulatory-evolution
	Wildfires, complexity, and highly optimized tolerance [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 50. (13 December 2005), pp. 17912-17917. by Max A. Moritz, Marco E. Morais, Lora A. Summerell, J. M. Carlson, John Doyle posted to robustness complexity by abhishek_tiwari on 2009-09-09 13:13:03 as along with 1 person krisl
	Highly Optimized Tolerance: Robustness and Design in Complex Systems [My Copy] Physical Review Letters, Vol. 84, No. 11. (13 Mar 2000), pp. 2529-2532. by J. M. Carlson, John Doyle posted to robustness by abhishek_tiwari on 2009-09-09 13:03:34 as along with 6 people and 3 groups dannya222 dpf krisl joseph_x_zhou augusto VRadenovic bioNetwork_sysBio AIRgroup DSTO-CAS
	Systems interface biology [My Copy] Journal of The Royal Society Interface, Vol. 3, No. 10. (22 October 2006), pp. 603-616. by Francis J. Doyle, Jörg Stelling posted to systemsbiology systems-biology robustness by abhishek_tiwari on 2009-09-09 12:52:31 as along with 3 people wnpx jrbanga karfunkel
	Robustness properties of circadian clock architectures [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 36. (7 September 2004), pp. 13210-13215. by Jörg Stelling, Ernst D. Gilles, Francis J. Doyle posted to robustness clocks clock by abhishek_tiwari on 2009-09-09 12:50:46 as along with 1 person rklancer
	Complexity and robustness [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. Suppl 1. (19 February 2002), pp. 2538-2545. by J. M. Carlson, John Doyle posted to robustness complexity by abhishek_tiwari on 2009-09-09 12:49:06 as along with 2 people shivakumar3_14 timflutre
	Towards a theory of biological robustness [My Copy] Mol Syst Biol, Vol. 3 (18 September 2007) by Hiroaki Kitano posted to robustness by abhishek_tiwari on 2009-09-09 12:38:25 as along with 12 people and 1 group xxavx VGreiff sjayanthi jjray dullhunk margaritis massivemayhem fishtank bootsy sobolevnrm Ema jf76 baker-group
	Sloppiness, robustness, and evolvability in systems biology. [My Copy] Current opinion in biotechnology, Vol. 19, No. 4. (August 2008), pp. 389-395. by Bryan C. Daniels, Yan-Jiun J. Chen, James P. Sethna, Ryan N. Gutenkunst, Christopher R. Myers posted to systems-biology robustness by abhishek_tiwari on 2009-09-09 12:36:46 as along with 4 people PaperCollector schwartzjmc cjryan benjaminsb
	Robust and optimal use of information in stereo vision. [My Copy] Nature, Vol. 397, No. 6714. (7 January 1999), pp. 63-66. by J. Porrill, J. P. Frisby, W. J. Adams, D. Buckley posted to robustness disparity depth causal_inference bayesian_inference by BBoyButzemann on 2009-09-09 08:12:01 as
	Mu-Synthesis [My Copy] Robust Flight Control In Robust Flight Control (1997), pp. 81-101. by Samir Bennani, Gertjan Looye, Carsten Scherer posted to value structured singular robustness mu-synthesis design controller aircraft by sengelken on 2009-09-07 13:07:21 as
	A natural class of robust networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 15. (22 July 2003), pp. 8710-8714. by Maximino Aldana, Philippe Cluzel posted to topology scale-free robustness nk network evolution dynamics analysis by tomhebbron on 2009-09-07 12:57:48 as along with 6 people and 5 groups dlobo kinop jmenche eldan jwdietrich timflutre GEB MathBio Cybernetics Biomedical_Cybernetics AQUA-FONTIS-Study
	Emergent Network Structure, evolvable Robustness and non-linear Effects of Point Mutations in an Artificial Genome Model [My Copy] (25 Aug 2009) by Thimo Rohlf, Christopher R. Winkler posted to robustness network mutation modularity genome evolution by jjray on 2009-08-26 15:47:22 as along with 1 person sigoldberg1
	Identification of a topological characteristic responsible for the biological robustness of regulatory networks. [My Copy] PLoS computational biology, Vol. 5, No. 7. (24 July 2009), e1000442. by Yangle Wu, Xiaomeng Zhang, Jianglei Yu, Qi Ouyang posted to yeast robustness network_motifs network information gene_regulation by jjray on 2009-08-25 21:00:03 as along with 7 people and 2 groups roys jago winterstream phoenixzxl reyez tinatoni TRHvidsten Software-Architecture Integrative Expertise for Global Health
	Role of Translational Coupling in Robustness of Bacterial Chemotaxis Pathway [My Copy] PLoS Biol, Vol. 7, No. 8. (18 August 2009), e1000171. by Linda Løvdok, Kajetan Bentele, Nikita Vladimirov, et al.Anette Müller, Ferencz S. Pop, Dirk Lebiedz, Markus Kollmann, Victor Sourjik posted to signaling robustness evolution chromosome_organization chemotaxis bacteria by jjray on 2009-08-25 17:31:36 as along with 2 people vladimirov biomcgary
	Biological robustness. [My Copy] Nature reviews. Genetics, Vol. 5, No. 11. (November 2004), pp. 826-837. by Hiroaki Kitano posted to robustness conceptual by VGreiff on 2009-08-24 22:29:20 as along with 16 people and 5 groups sergiun superpyrin dbk betainverse korakot LeightonP monod bayesian teuder biosv madhadron nickluscombe anatiferous timflutre ekoenig tomhebbron streptomyces Philosophy_of_Information dbk-lab Blog_and_Wiki_Research EBI-regulation
	Robustness of Cellular Functions [My Copy] Cell, Vol. 118, No. 6. (17 September 2004), pp. 675-685. by Jörg Stelling, Uwe Sauer, Zoltan Szallasi, Francis J. Doyle Iii, John Doyle posted to robustness review dynamics cellular_functions cell biology by winterstream on 2009-08-24 13:30:08 as along with 9 people and 1 group cryptochrome camster rklancer monod jjray bayesian javierFellow fishtank perpetuale dbk-lab
	Robustness and epistasis in mutation-selection models [My Copy] Physical Biology, Vol. 6, No. 3. (September 2009), 036007. by Andrea Wolff, Joachim Krug posted to robustness mathematical_model evolution epistasis biophysics by jjray on 2009-08-23 14:12:56 as
	Distance Measures, Robust Stability Conditions and Robust Performance Guarantees for Uncertain Feedback Systems [My Copy] Control of Uncertain Systems: Modelling, Approximation, and Design In Control of Uncertain Systems: Modelling, Approximation, and Design (2006), pp. 317-344. by George Papageorgiou, Alexander Lanzon edited by B. A. Francis, M. C. Smith, J. C. Willems posted to uncertainty robustness measures distance by sengelken on 2009-08-20 18:36:59 as

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evolution	71
network	62
networks	41
evolvability	34
noise	28
mathematical_model	19
parsing	19
complexity	18
stochastic	18
adaptation	17
development	16
systems_biology	16
linguistics	15
dynamics	14
gene_regulation	14
review	14
mutation	13
yeast	13
evolutionary-computation	12
metaheuristic	12
modularity	12
theory	12
feedback	11
gene	11
rna	11
attack	10
drosophila	10
multi-objective	10
network_motifs	10
stability	10
systems_approach	10
adaptive-systems	9
bacteria	9
control	9
image	8
model	8
optimization	8
phenotype	8
redundancy	8
signaling	8
trust	8
canalization	7
duplication	7
epistasis	7
grn	7
latent_variables	7
sem	7
biochemical_systems_theory	6
chemotaxis	6
continuous	6
design_principles	6
distance	6
essentiality	6
gene-networks	6
genetics	6
p2p	6
performance-assessment	6
protein	6
recommender	6
structure	6
sybil	6
synthetic_biology	6
systems-biology	6
testing	6
translation	6
uncertainty	6
alife	5
analysis	5
coding	5
collaborative-filtering	5
computational	5
constraint	5
design	5
genetic	5
genome	5
gradient	5
mathematically_controlled_comparison	5
metabolism	5
metric	5
optimality	5
profile-injection	5
registration	5
regulation	5
resilience	5
secondary	5
algorithm	4
biology	4
boolnet	4
boosting	4
consistency	4
ea	4
gene_regulatory_net	4
genotype-to-phenotype	4
grammar	4
method	4
network_evolution	4
polytopes	4
topology	4
transcription	4
watermarking	4

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