Tag sequence_alignment [193 articles] Export

Recent papers classified by the tag sequence_alignment.

	Striped Smith-Waterman speeds database searches six times over other SIMD implementations [My Copy] Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. 156-161. by Michael Farrar posted to smith_waterman simd sequence_alignment computational_biology by cmzmasek on 2009-11-10 23:26:31 as along with 2 people nedwards walshtp
	A probabilistic model of local sequence alignment that simplifies statistical significance estimation. [My Copy] PLoS computational biology, Vol. 4, No. 5. (30 May 2008), e1000069. by Sean R. Eddy posted to sequence_alignment probabilistic_model hmms computational_biology by cmzmasek on 2009-11-06 03:27:24 as along with 9 people druvus vwchan treangen BioNica saerni dakelley aramesh2 Ema gdb
	Sense from sequence reads: methods for alignment and assembly [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S6-S12. by Paul Flicek, Ewan Birney posted to sequence_alignment algorithms by desany on 2009-10-30 17:11:34 as along with 10 people oannes74 Thaverkamp jasontsai natstreet seb1 druvus chvlyl GeeSharpMinor n00c venancio
	Recent progress in multiple sequence alignment: a survey. [My Copy] Pharmacogenomics, Vol. 3, No. 1. (January 2002), pp. 131-144. by Cédric Notredame posted to survey sequence_alignment multiple_sequence_alignment compbio alignment by akshayk on 2009-10-19 19:28:23 as along with 1 person newton1234
	Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. [My Copy] Molecular biology and evolution, Vol. 17, No. 4. (1 April 2000), pp. 540-552. by J. Castresana posted to sequence_alignment by biomcgary on 2009-10-08 21:49:50 as along with 9 people and 1 group ramonvidal operon druvus dmp aprasad treangen stajich ArtemPankin cmzmasek Mycology
	MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. [My Copy] Nucleic acids research, Vol. 30, No. 14. (15 July 2002), pp. 3059-3066. by Kazutaka Katoh, Kazuharu Misawa, Kei-ichi Kuma, Takashi Miyata posted to sequence_alignment by biomcgary on 2009-10-08 21:40:10 as along with 8 people calderonv natstreet druvus treangen rabio timflutre marti urgi
	CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. [My Copy] Nucleic acids research, Vol. 22, No. 22. (11 November 1994), pp. 4673-4680. by J. D. Thompson, D. G. Higgins, T. J. Gibson posted to sequence_alignment by biomcgary on 2009-10-08 21:36:53 as along with 34 people and 1 group vprieto tomjad oceanwind Blackbeard db344 udivi daforerog Md_2007 sebk cen4ik usagi-kirin jmw greger_halltorp jshapiro mercaptan evaf caldavis miguel onlyrey bjorns aprasad RMGraze moborg arcticrasta dullhunk caporaso ahanora Haggan BioNica timflutre adijr xingxu newton1234 Lombardo_7 biomedical-nlp
	New vistas in GPCR 3D structure prediction [My Copy] Journal of Molecular Modeling by Anwar Rayan posted to theory sequence_alignment sequence modeling gpcr by xdeupi on 2009-10-06 17:47:03 as along with 1 person arnaucordomi
	Quantitative Analysis of Sequence Alignment Applications on Multiprocessor Architectures [My Copy] In CF '09: Proceedings of the 6th ACM conference on Computing frontiers (2009), pp. 61-70. by No Friman Sánchez Casta, Alex Ramirez, Mateo Valero posted to sequence_alignment by c_hughes on 2009-10-02 17:28:53 as along with 1 person parnell
	Memory-Efficient A* Heuristics For Multiple Sequence Alignment [My Copy] In Eighteenth national conference on Artificial intelligence (2002), pp. 737-743. by Matthew McNaughton, Paul Lu, Jonathan Schaeffer, Duane Szafron posted to sequence_alignment by c_hughes on 2009-10-02 17:28:02 as
	A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons. [My Copy] Journal of molecular biology, Vol. 198, No. 2. (20 November 1987), pp. 327-337. by G. J. Barton, M. J. Sternberg posted to sequence_alignment by c_hughes on 2009-10-02 17:15:00 as
	Large-Scale Comparison of Protein Sequence Alignment Algorithms With Structure Alignments [My Copy] Proteins, Vol. 40 (2000), pp. 6-22. by J. Michael Sauder, Jonathan W. Arthur, Roland L. Dunbrack posted to sequence_alignment by c_hughes on 2009-10-02 17:13:15 as
	A Compressing Method for Genome Sequence Cluster using Sequence Alignment [My Copy] Computer and Information Technology, 2008. CIT 2008. 8th IEEE International Conference on (08 August 2008), pp. 520-525. by Kwang S. Jung, Nam H. Yu, Seung J. Shin, Keun H. Ryu posted to sequence_alignment by c_hughes on 2009-10-02 17:09:20 as
	Upcoming challenges for multiple sequence alignment methods in the high-throughput era [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2455-2465. by Carsten Kemena, Cedric Notredame posted to sequence_alignment review by AlexBateman to the group Journal picks on 2009-09-30 11:58:40 as along with 11 people and 1 group fstrozzi manduca djkt rdiaz sjcockell torfinnnome walshtp nuin natstreet druvus ollieredfernwork Orengo Group Journal Picks
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted to sequence_alignment genomics genomic_data alignment_methods by walshtp on 2009-09-29 14:16:02 as along with 32 people and 2 groups operon darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 cactus biomcgary lilou dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre jfr EisenLab microbiology_nijmegen
	MUSCLE: multiple sequence alignment with high accuracy and high throughput [My Copy] Nucl. Acids Res., Vol. 32, No. 5. (19 March 2004), pp. 1792-1797. by Robert C. Edgar posted to sequence_alignment bioinformatics by jeargle on 2009-09-27 23:18:16 as along with 29 people and 2 groups mgomes tomjad foxpowa esyoun natstreet dquest BioNica gjuggler edvin yylin treangen sebk agustinarce fhsantanna nachtalp bpb chrn jwm Haggan sanchezbuelna timflutre olympos martainn newton1234 skumagai bmaust sconlan dmp kcrawlik Radiation_Damage Stressosome
	Protein sectors: evolutionary units of three-dimensional structure. [My Copy] Cell, Vol. 138, No. 4. (21 August 2009), pp. 774-786. by Najeeb Halabi, Olivier Rivoire, Stanislas Leibler, Rama Ranganathan posted to sequence_alignment by dgront on 2009-09-25 23:29:32 as along with 10 people and 1 group yyfwuhan cmzmasek robfsouza pansapiens pablocarb vvoorr biomcgary dayjm jwm jbhiatt Marcotte_Lab
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted to sequence_alignment by timhubbard on 2009-09-19 11:53:35 as along with 72 people and 6 groups mtaschuk sjcockell niallhaslam djohnson thegoose humburg pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti ashaytan benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted to sequence_alignment by timhubbard on 2009-09-19 11:52:16 as along with 67 people and 5 groups niallhaslam ucbcjbm parnell tfuji maria_hauser jbhiatt yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell johanviklund daforerog nlapalu sebk tjimenez shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM References for 3DSim paper EisenLab biomedical-nlp Microbial-Ecology Plantandetc
	Identification of common molecular subsequences. [My Copy] Journal of molecular biology, Vol. 147, No. 1. (25 March 1981), pp. 195-197. by T. F. Smith, M. S. Waterman posted to sequence_alignment bioinformatics by jmanning2k on 2009-09-04 18:37:55 as along with 20 people jengeldk maria_hauser cmor parnell adamnellis timflutre heliopais mcbla alessandroparini usagi-kirin creswick vavi bicko dgront rabio cjeans incovoma sujaikumar newton1234 bozdagd
	CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 2. (2008), S10. by Svetlin Manavski, Giorgio Valle posted to sequence_alignment bioinformatics by jmanning2k on 2009-09-04 18:36:34 as along with 9 people ihaque druvus sterovetta operon alexgeorgiou antonkratz joule pansapiens bschaeli
	BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC [My Copy] BMC Evolutionary Biology, Vol. 9, No. 1. (28 August 2009), 217. by Rahul Satija, Adam Novak, Istvan Miklos, Rune Lyngso, Jotun Hein posted to sequence_alignment mcmc bayesian by phoenixzxl on 2009-09-02 02:23:45 as along with 3 people and 2 groups cmzmasek cisevol djkt cis-regulatory-evolution BergmanLab
	NCBI BLAST: a better web interface. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008) by Mark Johnson, Irena Zaretskaya, Yan Raytselis, Yuri Merezhuk, Scott McGinnis, Thomas L. Madden posted to sequence_alignment programa plantipoii bioinformatics by agustinarce on 2009-08-17 23:06:26 as along with 1 person guhjy
	Island method for estimating the statistical significance of profile-profile alignment scores. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 112. by Aleksandar Poleksic posted to profiles sequence_alignment by dgront on 2009-08-11 05:43:35 as along with 1 person zwang
	Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment. [My Copy] Nucleic acids research, Vol. 34, No. Web Server issue. (1 July 2006) by Timo Lassmann, Erik L. Sonnhammer posted to sequence_alignment by orzenil on 2009-08-08 17:40:13 as along with 2 people BioNica Haggan
	Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees [My Copy] Science, Vol. 324, No. 5934. (19 June 2009), pp. 1561-1564. by Kevin Liu, Sindhu Raghavan, Serita Nelesen, C. Randal Linder, Tandy Warnow posted to maximum_likelihood phylogenetics sequence_alignment by biomcgary on 2009-07-01 17:32:58 as along with 26 people and 4 groups gjuggler parnell kinestetika robertrentzsch xianjun gdb jbhiatt stajich operon kieran101 zwang michaelbarton vingron tatman303 hryk lizbiogen pkonings ppgardne dokky aprasad timflutre inquil TRHvidsten djkt fenghezi phoenixzxl Orengo Group Journal Picks Mycology Journal picks iSEEM
	Some biological sequence metrics [My Copy] Advances in Mathematics, Vol. 20, No. 3. (June 1976), pp. 367-387. by M. Waterman, T. Smith, W. Beyer posted to sequence_alignment by rabio on 2009-06-17 16:26:55 as
	An improved algorithm for matching biological sequences [My Copy] J Mol Biol, Vol. 162, No. 3. (15 December 1982), pp. 705-708. by Osamu Gotoh posted to sequence_alignment by rabio on 2009-06-17 10:36:43 as along with 5 people mmartin sebk vavi adijr jofiel
	Optimal sequence alignment using affine gap costs [My Copy] Bulletin of Mathematical Biology, Vol. 48, No. 5. (1 September 1986), pp. 603-616. by Stephen Altschul, Bruce Erickson posted to sequence_alignment by rabio on 2009-06-17 10:10:19 as
	PROCAIN server for remote protein sequence similarity search [My Copy] Bioinformatics, Vol. 25, No. 16. (15 August 2009), pp. 2076-2077. by Yong Wang, Ruslan I. Sadreyev, Nick V. Grishin posted to sequence_alignment by phoenixzxl on 2009-06-05 02:23:27 as along with 4 people and 1 group kshameer reyez carlosjavierna medic0747 Journal picks
	Estimation of Amino Acid Residue Substitution Rates at Local Spatial Regions and Application in Protein Function Inference: A Bayesian Monte Carlo Approach [My Copy] Molecular Biology and Evolution, Vol. 23, No. 2. (20 February 2006), pp. 421-436. by Yan Y. Tseng, Jie Liang posted to function_prediction markov_chain_monte_carlo sequence_alignment by iaolier on 2009-06-03 15:22:18 as along with 1 person drastic
	A structure and evolution-guided Monte Carlo sequence selection strategy for multiple alignment-based analysis of proteins [My Copy] Bioinformatics, Vol. 22, No. 2. (15 January 2006), pp. 149-156. by I. Mihalek, I. Res, O. Lichtarge posted to monte_carlo_selection protein_structure sequence_alignment by iaolier on 2009-06-03 14:57:20 as
	Modelling interaction sites in protein domains with interaction profile hidden Markov models [My Copy] Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2851-2857. by Torben Friedrich, Birgit Pils, Thomas Dandekar, Jorg Schultz, Tobias Muller posted to binding_sites_prediction hmm sequence_alignment by iaolier on 2009-06-03 11:46:32 as along with 1 person bicko
	Analysis and prediction of functionally important sites in proteins. [My Copy] Protein Sci, Vol. 16, No. 1. (January 2007), pp. 4-13. by S. Chakrabarti, C. J. Lanczycki posted to conservation_score functional_sites homology sequence_alignment by iaolier on 2009-06-03 11:43:03 as along with 6 people reyez tjimenez annotator_2006 MaggieYe zwang Jporci
	INTREPID--INformation-theoretic TREe traversal for Protein functional site IDentification [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2445-2452. by Sriram Sankararaman, Kimmen Sjolander posted to function_prediction functional_sites sequence_alignment by iaolier on 2009-06-02 22:44:23 as
	Accurate prediction of protein-protein interactions from sequence alignments using a Bayesian method [My Copy] Mol Syst Biol, Vol. 4 (12 February 2008) by Lukas Burger, Erik van Nimwegen posted to binding_sites_prediction machine_learning protein protein-protein_interaction sequence_alignment by iaolier on 2009-06-02 15:14:16 as along with 14 people robfsouza raik sjcockell kengg grahamc laughcry zwang biomcgary cabbagezs roys cdeane gjuggler phoenixzxl pansapiens
	Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids [My Copy] (01 July 1999) by Richard Durbin, Sean R. Eddy, Anders Krogh, Graeme Mitchison posted to book sequence_alignment by heliopais on 2009-05-11 12:19:55 as along with 15 people and 1 group adijr esyoun bicko derek_farn stanley ujh pcahan1 balajis indigoviolet moborg emranmohdtamil dullhunk rabio wenhan xiaobeizhao EisenLab
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [My Copy] Genome Biology, Vol. 10, No. 3. (4 March 2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven Salzberg posted to sequence_alignment by heliopais on 2009-04-01 13:09:54 as along with 34 people and 4 groups cthachuk darshan fstrozzi adijr debasis bozdagd polivares torfinnnome n00c talponer jmcq rschulz ghattem operon humburg idonaldson mmartin skembel dquest djkt GeeSharpMinor bertelsen darian semrich dakelley idoerg vmsr hpaces admash pdexheimer mhamada fpattyn natstreet druvus BergmanLab SIMR bioinformatics iSEEM Notre Dame Bioinformatics
	WWW-query: an on-line retrieval system for biological sequence banks. [My Copy] Biochimie, Vol. 78, No. 5. (1996), pp. 364-369. by G. Perrière, M. Gouy posted to bioinformatics phylogeny sequence_alignment by jwm on 2009-03-17 10:16:57 as
	PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 381. by Daniel Caffrey, Paul Dana, Vidhya Mathur, et al.Marco Ocano, Eun J. Hong, Yaoyu Wang, Shyamal Somaroo, Brian Caffrey, Shobha Potluri, Enoch Huang posted to bioinformatics sequence_alignment by jwm on 2009-03-16 17:23:46 as
	Sequence context-specific profiles for homology searching [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 10. (10 March 2009), pp. 3770-3775. by A. Biegert, J. Söding posted to sequence_alignment by phoenixzxl on 2009-03-11 07:56:22 as along with 7 people yylin ikirmitz TRHvidsten operon dakelley martainn zwang
	High throughput direct end sequencing of BAC clones. [My Copy] Nucleic acids research, Vol. 27, No. 6. (15 March 1999), pp. 1539-1546. by J. M. Kelley, C. E. Field, M. B. Craven, et al.D. Bocskai, U. J. Kim, S. D. Rounsley, M. D. Adams posted to de_novo_sequencing ngs selection sequence_alignment by floatingpoint on 2009-02-16 15:19:55 as
	Assembling millions of short DNA sequences using SSAKE [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 500-501. by Rene L. Warren, Granger G. Sutton, Steven J. M. Jones, Robert A. Holt posted to de_novo_sequencing ngs sequence_alignment by floatingpoint on 2009-02-16 15:18:45 as along with 13 people katholt jbhiatt jsatkosk AaronDarling idoerg caseybrown druvus natstreet azazello iris42 nmohelli Neeperando yoonk
	Extending assembly of short DNA sequences to handle error. [My Copy] Bioinformatics, Vol. 23, No. 21. (1 November 2007), pp. 2942-2944. by W. R. Jeck, J. A. Reinhardt, D. A. Baltrus, et al.M. T. Hickenbotham, V. Magrini, E. R. Mardis, J. L. Dangl, C. D. Jones posted to de_novo_sequencing ngs sequence_alignment by floatingpoint on 2009-02-16 15:17:35 as along with 6 people idoerg natstreet druvus guhjy azazello Neeperando
	Joint Evolutionary Trees: A Large-Scale Method To Predict Protein Interfaces Based on Sequence Sampling [My Copy] PLoS Comput Biol, Vol. 5, No. 1. (23 January 2009), e1000267. by Stefan Engelen, Ladislas A. Trojan, Sophie Sacquin-Mora, Richard Lavery, Alessandra Carbone posted to evolution prediction_interface sequence_alignment by phoenixzxl on 2009-02-02 08:59:00 as along with 3 people zwang kshameer druvus
	Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. [My Copy] Genome Res, Vol. 15, No. 8. (August 2005), pp. 1034-1050. by A. Siepel, G. Bejerano, J. S. Pedersen, et al.A. S. Hinrichs, M. Hou, K. Rosenbloom, H. Clawson, J. Spieth, L. W. Hillier, S. Richards, G. M. Weinstock, R. K. Wilson, R. A. Gibbs, W. J. Kent, W. Miller, D. Haussler posted to hmm phastcons phylogenetic sequence_alignment by alessandroparini on 2009-01-07 18:28:06 as along with 20 people and 4 groups thegoose2 farhat skembel tharris bpb aprasad balajis eckart_bindewald indigoviolet brant pradiptaray adepace djkt olympos sujaikumar Stew cisevol dmc elfar AlexanderPico C. elegans / WormBase EisenLab cis-regulatory-evolution ConklinLab
	Identification of common molecular subsequences [My Copy] Journal of Molecular Biology, Vol. 147, No. 1. (25 March 1981), pp. 195-197. by T. Smith posted to algorithm sequence_alignment by alessandroparini on 2009-01-06 23:07:11 as along with 6 people stharward farhat sebk BioNica jofiel elfar
	Automated generation of heuristics for biological sequence comparison [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005), 31. by Guy Slater, Ewan Birney posted to exonerate sequence_alignment by orzenil on 2008-12-17 16:04:01 as along with 10 people and 1 group darian mhamada jmcq druvus waszak indigoviolet massivemayhem wenhan hpaces marti EisenLab
	Clustal W and Clustal X version 2.0 [My Copy] Bioinformatics, Vol. 23, No. 21. (1 November 2007), pp. 2947-2948. by M. A. Larkin, G. Blackshields, N. P. Brown, et al.R. Chenna, P. A. McGettigan, H. McWilliam, F. Valentin, I. M. Wallace, A. Wilm, R. Lopez, J. D. Thompson, T. J. Gibson, D. G. Higgins posted to bioinformatics sequence_alignment by jwm on 2008-11-12 13:41:59 as along with 18 people l00cas vprieto Copper_Calcio TLVincent tomjad BioNica udivi Keksle hpm druvus treangen cassj lisa1 ryanraaum bmaust alanrw mschofie marck
	A comparison of MSA tools. [My Copy] Bioinformation, Vol. 2, No. 10. (2008), pp. 452-455. by N. Essoussi, K. Boujenfa, M. Limam posted to sequence_alignment by jwm on 2008-11-11 11:20:03 as along with 1 person chad_davis

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article	98
c_elegans	98
caenorhabditis_elegans	98
celegans	98
elegans	98
molecular_sequence_data	98
nematode	98
wormbase	98
amino_acid_sequence	86
bioinformatics	82
base_sequence	78
caenorhabditis_elegans_genetics	46
cloning_molecular	42
sequence_homology_amino_acid	40
caenorhabditis_genetics	30
sequence_comparison	27
structure_prediction	27
genes_structural_helminth	26
biophysics	24
helminth_proteins_genetics	24
rna	24
algorithms	23
protein_sequence	21
helminth_proteins_chemistry	18
statistical_potentials	18
dna	16
dna_complementary_genetics	16
evolution	16
caenorhabditis_elegans_enzymology	14
rna_messenger_genetics	14
species_specificity	14
structure_alignment	14
phylogeny	13
chromosome_mapping	12
gene_expression_regulation_developmental	12
genes_reiterated	12
introns	12
repetitive_sequences_nucleic_acid	12
sequence_homology_nucleic_acid	12
suboptimal_alignment	11
caenorhabditis_elegans_embryology	10
gene_expression_regulation	10
restriction_mapping	10
structure_comparison	9
blotting_southern	8
codon	8
consensus_sequence	8
dna_genetics	8
exons	8
hmm	8
mutation	8
polymerase_chain_reaction	8
sequence_analysis_dna	8
translation_genetic	8
multiple_sequence_alignment	7
alignment_quality	6
alleles	6
base_composition	6
blotting_northern	6
c42d82	6
caenorhabditis_embryology	6
caenorhabditis_enzymology	6
cafasp	6
carrier_proteins_chemistry	6
casp	6
databases_factual	6
dna_insertion_elements	6
dna_primers_chemistry	6
drosophila_melanogaster_genetics	6
genes_helminth	6
genes_structural	6
larva	6
membrane_glycoproteins_genetics	6
model_assessment	6
nucleic_acid_conformation	6
probabilistic_alignment	6
recombinant_fusion_proteins_biosynthesis	6
secondary_structure	6
transcription_genetic	6
vit-2	6
vitellogenin_genetics	6
comparative_modeling	5
software	5
threading	5
ascaris_suum_genetics	4
caenorhabditis_growth_and_development	4
dna_binding_proteins_chemistry	4
f02a96	4
genes_reiterated_genetics	4
genome	4
globin_genetics	4
glp-1	4
helminth_proteins_analysis	4
helminth_proteins_biosynthesis	4
k07h86	4
morphogenesis	4
protein_conformation	4
sequence	4
transcription_factors_genetics	4
zc4168	4

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