Tag sequence_similarity [17 articles] Export Sort

Recent papers classified by the tag sequence_similarity.

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	BLAST+: architecture and applications [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 421. by Christiam Camacho, George Coulouris, Vahram Avagyan, et al.Ning Ma, Jason Papadopoulos, Kevin Bealer, Thomas Madden posted to sequence_similarity bioinformatics by richardbickerton on 2009-12-17 11:51:21 as along with 16 people and 2 groups maximilianh operon jeargle kiekyon michaelbarton cisevol zhangce chriscole heliopais phoenixzxl mizuho torfinnnome walshtp kshameer nuin druvus BergmanLab Journal picks
	Structure of the head of the Bartonella adhesin BadA. [My Copy] PLoS pathogens, Vol. 4, No. 8. (2008) by Pawel Szczesny, Dirk Linke, Astrid Ursinus, et al.Kerstin Bär, Heinz Schwarz, Tanja M. Riess, Volkhard A. Kempf, Andrei N. Lupas, Jörg Martin, Kornelius Zeth posted to taas sequence_similarity crystal_structure bartonella adhesin by freesci on 2009-12-14 10:23:42 as along with 1 person bjorns
	PLAST: parallel local alignment search tool for database comparison [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 329. by Van H. Nguyen, Dominique Lavenier posted to similarity_search sequence_similarity parallel_algorithm bioinformatics by ppgardne to the group Journal picks on 2009-10-19 09:33:12 as along with 4 people and 1 group reyez polivares installe druvus BergmanLab
	Protein homology detection by HMM-HMM comparison [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 21, No. 7. (1 April 2005), pp. 951-960. by Johannes Soding posted to sequence_similarity by tjimenez on 2008-11-11 18:47:42 as along with 4 people dfdong grottenolm maria_hauser j3xucite
	Rapid and sensitive protein similarity searches. [My Copy] Science (New York, N.Y.), Vol. 227, No. 4693. (22 March 1985), pp. 1435-1441. by D. J. Lipman, W. R. Pearson posted to sequence_similarity by tjimenez on 2008-11-11 18:34:31 as along with 4 people c_hughes dgront CitoJam lusk
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted to sequence_similarity by tjimenez on 2008-11-07 19:21:41 as along with 69 people and 5 groups saunders rshe niallhaslam ucbcjbm timhubbard parnell tfuji maria_hauser jbhiatt yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell johanviklund daforerog nlapalu sebk shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM References for 3DSim paper EisenLab biomedical-nlp Microbial-Ecology Plantandetc
	Automatic methods for predicting functionally important residues. [My Copy] J Mol Biol, Vol. 326, No. 4. (28 February 2003), pp. 1289-1302. by A. del Sol Mesa, F. Pazos, A. Valencia posted to sequence_similarity by tjimenez on 2008-08-09 19:05:48 as along with 2 people kaarsinogen nickolay
	Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families [My Copy] Protein Sci, Vol. 13, No. 2. (1 February 2004), pp. 443-456. by Olga V. Kalinina, Andrey A. Mironov, Mikhail S. Gelfand, Aleksandra B. Rakhmaninova posted to sequence_similarity by tjimenez on 2008-08-09 19:02:14 as along with 1 person sriram_s
	Gene fusions and gene duplications: relevance to genomic annotation and functional analysis. [My Copy] BMC Genomics, Vol. 6, No. 1. (9 March 2005) by M. H. Serres, M. Riley posted to sequence_similarity by tjimenez on 2008-08-09 19:01:20 as along with 1 person tmmurali
	Using orthologous and paralogous proteins to identify specificity determining residues. [My Copy] Genome biology, Vol. 3, No. 3. (2002) by L. A. Mirny, M. S. Gelfand posted to sequence_similarity by tjimenez on 2008-08-09 19:00:35 as
	Finding functional sites in structural genomics proteins. [My Copy] Structure (London, England : 1993), Vol. 12, No. 8. (August 2004), pp. 1405-1412. by A. Stark, A. Shkumatov, R. B. Russell posted to binding_pocket_recognition sequence_similarity by tjimenez on 2008-04-23 07:33:35 as
	FRalanyzer: a tool for functional analysis of fold-recognition sequence-structure alignments. [My Copy] Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007) by H. K. Saini, D. Fischer posted to sequence_similarity by tjimenez on 2007-11-08 17:02:32 as
	Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids [My Copy] (01 July 1999) by Richard Durbin, Sean R. Eddy, Anders Krogh, Graeme Mitchison posted to hmm profile sequence_alignment sequence_analysis sequence_profile sequence_similarity substitution_matrices by rabio on 2007-02-23 14:51:30 as along with 15 people and 1 group adijr esyoun heliopais bicko derek_farn stanley ujh pcahan1 balajis indigoviolet moborg emranmohdtamil dullhunk wenhan xiaobeizhao EisenLab
	Where did the BLOSUM62 alignment score matrix come from? [My Copy] Nature Biotechnology, Vol. 22, No. 8. (August 2004), pp. 1035-1036. by Sean R. Eddy posted to sequence_alignment sequence_similarity by rabio on 2007-02-15 02:31:15 as along with 7 people and 1 group svozil mcbla ziquje bicko gurkanbebek xiaobeizhao reyez Bioinformatics
	Evolution of protein sequences and structures [My Copy] Journal of Molecular Biology, Vol. 291, No. 4. (27 August 1999), pp. 977-995. by Todd C. Wood, William R. Pearson posted to sequence_similarity structure_similarity by rabio on 2007-02-12 11:56:24 as along with 2 people and 3 groups ana sobolevnrm structural_bioinformatics Bioinformatics baker-group
	Visualizing Sequence Similarity of Protein Families [My Copy] Genome Research, Vol. 14, No. 6. (1 June 2004), pp. 1160-1169. by Vamsi Veeramachaneni, Wojciech Makałowski posted to sequence_similarity by rabio on 2007-02-12 11:28:27 as along with 1 person anka
	Sequence conservation in families whose members have little or no sequence similarity: the four-helical cytokines and cytochromes. [My Copy] J Mol Biol, Vol. 322, No. 1. (6 September 2002), pp. 205-233. by E. E. Hill, V. Morea, C. Chothia posted to sequence_similarity by tjimenez on 2005-06-13 12:37:38 as along with 1 person bandrewfox

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