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	Gene-Expression Signatures in Breast Cancer [My Copy] N Engl J Med, Vol. 360, No. 8. (19 February 2009), pp. 790-800. by Christos Sotiriou, Lajos Pusztai posted to signature review gene expression cancer breast by songpku on 2009-11-01 20:31:42 as along with 6 people and 1 group giovenko tonamswish jfr Zephyrus edwardli misonneh Breast Cancer Reading Club
	Trust but verify: accountability for network services [My Copy] In EW11: Proceedings of the 11th workshop on ACM SIGOPS European workshop (2004) by Aydan R. Yumerefendi, Jeffrey S. Chase posted to signature records network_services accountability by lilith to the group 8_01 on 2009-10-29 20:55:30 as along with 1 person frdr
	Expression-based Pathway Signature Analysis (EPSA): Mining publicly available microarray data for insight into human disease. [My Copy] BMC medical genomics, Vol. 1, No. 1. (20 October 2008) by Jessica D. Tenenbaum, Michael G. Walker, Paul J. Utz, Atul J. Butte posted to signature pathway mining epsa disease analysis by dolchan on 2009-10-29 17:15:35 as along with 9 people ipark-kaist jfr zufar daforerog imina guhjy huiminC ptrobajo oelemento
	Word-based characterization of promoters involved in human DNA repair pathways [My Copy] BMC Genomics, Vol. 10, No. Suppl 1. (2009), S18. by Jens Lichtenberg, Edwin Jacox, Joshua Welch, et al.Kyle Kurz, Xiaoyu Liang, Mary Yang, Frank Drews, Klaus Ecker, Stephen Lee, Laura Elnitski, Lonnie Welch posted to word_clusters transfac signature regulatory_networks regulatory_factors regulatory_aspects regulatory promoters promoter_sequences promoter_regions pattern motif jaspar human_dna_repair genomic functional_elements dna_sequences dna_repair_pathways dna_repair_genes dna_damage discovery bidirectional by lichtenj on 2009-10-12 13:24:11 as
	The word landscape of the non-coding segments of the Arabidopsis thaliana genome [My Copy] BMC Genomics, Vol. 10, No. 1. (08 October 2009), 463. by Jens Lichtenberg, Alper Yilmaz, Joshua Welch, et al.Kyle Kurz, Xiaoyu Liang, Frank Drews, Klaus Ecker, Stephen Lee, Matt Geisler, Erich Grotewold, Lonnie Welch posted to signature regulatory pattern motif genomic discovery arabidopsis by lichtenj on 2009-10-12 13:22:12 as along with 2 people druvus natstreet
	HMM-based databases in InterPro [My Copy] Brief Bioinform, Vol. 3, No. 3. (1 January 2002), pp. 236-245. by Alex Bateman, Daniel H. Haft posted to signature protein pattern motif interproscan hmm domain database databank bank annotation by nlapalu on 2009-10-09 16:46:40 as
	Applications of InterPro in protein annotation and genome analysis [My Copy] Brief Bioinform, Vol. 3, No. 3. (1 January 2002), pp. 285-295. by Margaret Biswas, John F. O'Rourke, Evelyn Camon, et al.Gill Fraser, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia Kriventseva, Virginie Mittard, Nicola Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler posted to signature prosite prediction pattern motif interproscan functional domain database databank annotation by nlapalu on 2009-10-09 16:43:47 as
	ProRule: a new database containing functional and structural information on PROSITE profiles [My Copy] Bioinformatics, Vol. 21, No. 21. (1 November 2005), pp. 4060-4066. by Christian J. A. Sigrist, Edouard De Castro, Petra S. Langendijk-Genevaux, Virginie Le Saux, Amos Bairoch, Nicolas Hulo posted to signature protein prosite pattern motif functional domain database databank bank by nlapalu on 2009-10-09 16:41:31 as
	ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_2. (1 July 2006), pp. W362-365. by Edouard de Castro, Christian J. A. Sigrist, Alexandre Gattiker, et al.Virginie Bulliard, Petra S. Langendijk-Genevaux, Elisabeth Gasteiger, Amos Bairoch, Nicolas Hulo posted to signature protein prosite pattern motif functional database databank bank by nlapalu on 2009-10-09 16:39:14 as along with 3 people Copper_Calcio niallhaslam fbristow
	The Genetic Signatures of Noncoding RNAs [My Copy] PLoS Genet, Vol. 5, No. 4. (24 April 2009), e1000459. by John S. Mattick posted to signature rna non-coding genetic by Zephyrus on 2009-10-08 15:15:00 as along with 21 people and 2 groups antonkratz bertelsen frohike natstreet guhjy gdb giovenko galka8_diploma aditi9783 daforerog ealloza dpollard hrogers coela ilyashl fenghezi reyez maximilianh giovanni djkt stajich RockmanLab Mycology
	The 20 years of PROSITE [My Copy] Nucl. Acids Res., Vol. 36, No. Database issue. (14 November 2007), gkm977. by Nicolas Hulo, Amos Bairoch, Virginie Bulliard, et al.Lorenzo Cerutti, Beatrice A. Cuche, Edouard Castro, Corinne Lachaize, Petra S. Langendijk-Genevaux, Christian J. A. Sigrist posted to signature prosite motif domain database databank bank by nlapalu on 2009-10-07 17:47:20 as along with 7 people Zoltan_Barczikay fbristow ojabado reyez dullhunk hplatero Evangelia
	Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. [My Copy] JAMA : the journal of the American Medical Association, Vol. 299, No. 13. (2 April 2008), pp. 1574-1587. by Chaitanya R. Acharya, David S. Hsu, Carey K. Anders, et al.Ariel Anguiano, Kelly H. Salter, Kelli S. Walters, Richard C. Redman, Sascha A. Tuchman, Cynthia A. Moylan, Sayan Mukherjee, William T. Barry, Holly K. Dressman, Geoffrey S. Ginsburg, Kelly P. Marcom, Katherine S. Garman, Gary H. Lyman, Joseph R. Nevins, Anil Potti posted to signature personalized-medicine pathology gene-expression clinical cancer by bertelsen on 2009-10-04 12:12:42 as along with 4 people ptrobajo Zephyrus jfr guhjy
	A mouse mammary gland involution mRNA signature identifies biological pathways potentially associated with breast cancer metastasis. [My Copy] Journal of mammary gland biology and neoplasia, Vol. 14, No. 2. (1 June 2009), pp. 99-116. by Torsten Stein, Nathan Salomonis, Dimitry S. Nuyten, Marc J. van de Vijver, Barry A. Gusterson posted to signature prognosis pregnancy mammary involution by Zephyrus on 2009-10-01 23:05:32 as
	Effects of sample size on robustness and prediction accuracy of a prognostic gene signature [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (16 May 2009), 147. by Seon Y. Kim posted to size signature sample multiplicity classification by rdiaz on 2009-09-23 17:34:14 as along with 3 people ice9 lwaldron shikin
	Microarray based diagnosis profits from better documentation of gene expression signatures. [My Copy] PLoS computational biology, Vol. 4, No. 2. (1 February 2008), e22. by Dennis Kostka, Rainer Spang posted to signature microarray gene expression diagnosis annotation by ptrobajo on 2009-09-17 15:12:15 as along with 2 people jfr giovanni
	Community-wide analysis of microbial genome sequence signatures [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R85. by Gregory Dick, Anders Andersson, Brett Baker, et al.Sheri Simmons, Brian Thomas, A. Pepper Yelton, Jillian Banfield posted to signature population microbial_communities by druvus on 2009-09-17 12:14:04 as along with 7 people and 2 groups dakelley bdessailly skembel djkt jonilaserson neils barriot Orengo Group Journal Picks iSEEM
	Pooling breast cancer datasets has a synergetic effect on classification performance and improves signature stability. [My Copy] BMC genomics, Vol. 9, No. 1. (06 August 2008), 375. by Martin H. van Vliet, Fabien Reyal, Hugo M. Horlings, Marc J. van de Vijver, Marcel J. Reinders, Lodewyk F. Wessels posted to signature pooling microarray integration herman cancer breast by ptrobajo on 2009-09-12 22:33:15 as along with 2 people jjrodriguez jfr
	Outcome signature genes in breast cancer: is there a unique set? [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 2. (15 January 2005), pp. 171-178. by Liat Ein-Dor, Itai Kela, Gad Getz, David Givol, Eytan Domany posted to signature selection herman feature cancer breast by ptrobajo on 2009-09-12 22:31:20 as along with 6 people and 2 groups vertikalist shikin zufar frohike fishtank winterschlaefer BTS-PT-AS-CS Bioinformatics
	Confounding Effects in "A Six-Gene Signature Predicting Breast Cancer Lung Metastasis" [My Copy] Cancer Res (1 September 2009), 0008-5472.CAN-08-3350. by Aedin C. Culhane, John Quackenbush posted to breast-cancer for:jfr six_genes_model signature lung_metastasis comment by frohike on 2009-09-10 09:46:54 as
	Identification of Global Transcriptional Dynamics [My Copy] PLoS ONE, Vol. 4, No. 7. (10 July 2009), e5992. by Eric H. Yang, Richard R. Almon, Debra C. DuBois, Willian J. Jusko, Ioannis P. Androulakis posted to time_course signature by rdiaz on 2009-09-09 16:01:12 as
	Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (26 July 2006), 359. by Ian Jeffery, Desmond Higgins, Aedin Culhane posted to signature by mingzhi on 2009-09-08 14:24:16 as along with 11 people zchen daforerog zufar akastrin tg150 rdiaz jfr mayercd shikin bakakaj renatomilani
	Automated multidimensional phenotypic profiling using large public microarray repositories. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 30. (28 July 2009), pp. 12323-12328. by Min Xu, Wenyuan Li, Gareth M. James, Michael R. Mehan, Xianghong Jasmine J. Zhou posted to signature profile phenotypic expression coexpression by rdiaz on 2009-09-08 13:01:45 as along with 7 people tmmurali giovanni Borelli guhjy TRHvidsten yaredo ptrobajo
	Utilization of Genomic Signatures to Identify Phenotype-Specific Drugs [My Copy] PLoS ONE, Vol. 4, No. 8. (28 August 2009), e6772. by Seiichi Mori, Jeffrey T. Chang, Eran R. Andrechek, Anil Potti, Joseph R. Nevins posted to signature expression drug by rdiaz on 2009-09-07 14:48:17 as
	Towards the definition of prostate cancer-related microRNAs: where are we now? [My Copy] Trends in Molecular Medicine (27 August 2009) by Paolo Gandellini, Marco Folini, Nadia Zaffaroni posted to signature review prostate-cancer profiling mirna by sterovetta to the group microRNA on 2009-09-02 08:44:47 as
	Identifying genes that contribute most to good classification in microarrays. [My Copy] BMC bioinformatics, Vol. 7 (07 September 2006), 407. by Stuart G. Baker, Barnett S. Kramer posted to signature microarray_data classification by frohike on 2009-08-26 08:36:07 as along with 5 people aezrin srp33 jfr rdiaz shigepong
	Behavioural phenotype affects social interactions in an animal network [My Copy] Proceedings of the Royal Society B: Biological Sciences, Vol. 275, No. 1650. (7 November 2008), pp. 2515-2520. by Thomas W. Pike, Madhumita Samanta, Jan LindstrÃ¶m, Nick J. Royle posted to structure social signature network interaction by compbio on 2009-08-19 23:47:11 as along with 3 people jbsaltz MehdiMoussaid roodubh
	A certified digital signature [My Copy] In CRYPTO '89: Proceedings on Advances in cryptology (1989), pp. 218-238. by Ralph C. Merkle posted to signature security cryptograhy by HailunTan on 2009-08-17 03:03:19 as
	A ROM-friendly secure code update mechanism for WSNs using a stateful-verifier \$τ\$-time signature scheme [My Copy] In WiSec '09: Proceedings of the second ACM conference on Wireless network security (2009), pp. 29-40. by Osman Ugus, Dirk Westhoff, Jens M. Bohli posted to wsn signature security network-programming by HailunTan on 2009-08-16 08:01:17 as along with 1 person mortenthansen
	A Digital Signature Based on a Conventional Encryption Function [My Copy] In CRYPTO '87: A Conference on the Theory and Applications of Cryptographic Techniques on Advances in Cryptology (1988), pp. 369-378. by Ralph C. Merkle posted to signature security by HailunTan on 2009-08-13 05:57:19 as along with 1 person TPTPTP
	Predictive Biomarkers: Identification and Verification [My Copy] J Clin Oncol, Vol. 27, No. 17. (10 June 2009), pp. 2743-2744. by Timothy J. Yeatman posted to biomarker colorectal_cancer editorial rectal_cancer signature by frohike on 2009-08-07 10:20:19 as
	Molecular Response to Cetuximab and Efficacy of Preoperative Cetuximab-Based Chemoradiation in Rectal Cancer [My Copy] J Clin Oncol, Vol. 27, No. 17. (10 June 2009), pp. 2751-2757. by Annelies Debucquoy, Karin Haustermans, Anneleen Daemen, et al.Selda Aydin, Louis Libbrecht, Olivier Gevaert, Bart De Moor, Sabine Tejpar, William H. Mcbride, Freddy Penninckx, Pierre Scalliet, Christopher Stroh, Soetkin Vlassak, Christine Sempoux, Jean-Pascal Machiels posted to cetuximab colorectal_cancer microarray_data proteomics rectal_cancer signature by frohike on 2009-08-07 10:19:46 as
	A gene expression predictor of response to EGFR-targeted therapy stratifies progression-free survival to cetuximab in KRAS wild-type metastatic colorectal cancer [My Copy] BMC Cancer, Vol. 9, No. 1. (13 May 2009), 145. by Justin Balko, Esther Black posted to cetuximab colon_cancer colorectal_cancer egfr kras lung_cancer signature survival by frohike on 2009-08-07 09:00:14 as
	A six-gene signature predicting breast cancer lung metastasis. [My Copy] Cancer research, Vol. 68, No. 15. (1 August 2008), pp. 6092-6099. by Thomas Landemaine, Amanda Jackson, Akeila Bellahcène, et al.Nadia Rucci, Soraya Sin, Berta Martin M. Abad, Angels Sierra, Alain Boudinet, Jean-Marc M. Guinebretière, Enrico Ricevuto, Catherine Noguès, Marianne Briffod, Ivan Bièche, Pascal Cherel, Teresa Garcia, Vincent Castronovo, Anna Teti, Rosette Lidereau, Keltouma Driouch posted to breast-cancer six_genes_model signature metastasis lung_metastasis by frohike on 2009-08-06 09:29:16 as along with 2 people and 1 group Zephyrus jfr Breast Cancer Reading Club
	Correlation signature of the macroscopic states of the gene regulatory network in cancer. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 11. (17 March 2009), pp. 4079-4084. by Nikolai Slavov, Kenneth A. Dawson posted to correlation gene microarray network pathway regulation signature vector by fpattyn on 2009-08-05 10:21:18 as along with 5 people and 1 group zufar jfr vertikalist rdiaz provero BTS-PT-AS-CS
	A simple and robust method for connecting small-molecule drugs using gene-expression signatures [My Copy] BMC Bioinformatics, Vol. 9 (02 June 2008), 258. by Shu-Dong Zhang, Timothy W. Gant posted to connectivity connectivity_map drug microarray_data signature small_molecule by frohike on 2009-08-03 22:12:30 as along with 5 people AbnerCYH Yanno orzenil guhjy jfr
	On reliable discovery of molecular signatures [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (29 January 2009), 38. by Roland Nilsson, Johan Bjorkegren, Jesper Tegner posted to classification fdr herman microarrray signature by ptrobajo on 2009-08-03 08:05:02 as along with 4 people and 1 group Zephyrus renatomilani guhjy jfr Roswell Cancer Crosstalk
	MicroRNA expression profiling of human metastatic cancers identifies cancer gene targets [My Copy] The Journal of Pathology, Vol. 9999, No. 9999. (2009), n/a. by Raffaele Baffa, Matteo Fassan, Stefano Volinia, et al.Brian O'Hara, Chang-Gong Liu, Juan P. Palazzo, Marina Gardiman, Massimo Rugge, Leonard G. Gomella, Carlo M. Croce, Anne Rosenberg posted to ffpe metastasis mirna profiling signature solid tumors by abhattac on 2009-07-30 15:10:25 as
	Cancer biology: Signatures guide drug choice [My Copy] Nature, Vol. 439, No. 7074. (19 January 2006), pp. 274-275. by Julian Downward posted to biology cancer drug drug-discovery gene-expression signature tumour by bertelsen on 2009-07-24 21:11:57 as along with 2 people and 1 group guhjy julius SysbioMPI-TCells
	Biclustering Algorithms: A Survey [My Copy] In In Handbook of Computational Molecular Biology Edited by: Aluru S. Chapman & Hall/CRC Computer and Information Science Series (2005) by Amos Tanay, Roded Sharan, Ron Shamir posted to and biclustering cheng churchs coupled data iteratice modeling samba signature statistical two-way by socwangnan on 2009-07-21 06:26:06 as
	Iterative signature algorithm for the analysis of large-scale gene expression data [My Copy] Physical Review E, Vol. 67, No. 3. (11 Mar 2003), 031902. by Sven Bergmann, Jan Ihmels, Naama Barkai posted to expression signature by mingzhi on 2009-07-10 13:29:25 as along with 2 people and 1 group TRHvidsten tvdbulck Bioinformatics
	Whistle Convergence among Allied Male Bottlenose Dolphins (Delphinidae, <i>Tursiops</i> sp.) [My Copy] Ethology, Vol. 105, No. 7. (1999), pp. 595-617. by Rachel Smolker, John W. Pepper posted to behavior call cohesion dolphin signature whistle by kpjean on 2009-07-05 00:58:40 as
	Signatures of gene expression noise in cellular systems. [My Copy] Progress in biophysics and molecular biology (11 June 2009) by Julia Rausenberger, Christian Fleck, Jens Timmer, Markus Kollmann posted to gene-expression noise signature systems-biology transcription by bertelsen on 2009-07-04 20:59:36 as
	GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W323-328. by Alexey V. Antonov, Sabine Dietmann, Philip Wong, Dominik Lutter, Hans W. Mewes posted to activity application cooperative gene lists microrna server signature site web by dswan to the group Bioinformatics on 2009-06-30 10:33:30 as along with 4 people GustavoLacerda ealloza guhjy daforerog
	Sex difference in signature whistle production of free-ranging bottlenose dolphins, Tursiops truncates [My Copy] Behavioral Ecology and Sociobiology, Vol. 36, No. 3. (1 March 1995), pp. 171-177. by Laela S. Sayigh, Peter L. Tyack, Randall S. Wells, Michael D. Scott, Blair A. Irvine posted to bioacoustic bottlnose dolphin signature whistle by kpjean on 2009-06-28 18:40:20 as
	A digital signature scheme secure against adaptive chosen-message attacks [My Copy] SIAM J. Comput., Vol. 17, No. 2. (1988), pp. 281-308. by Shafi Goldwasser, Silvio Micali, Ronald L. Rivest posted to signature by pcamacho on 2009-06-25 20:35:08 as
	An advanced signature system for OLSR [My Copy] In SASN '04: Proceedings of the 2nd ACM workshop on Security of ad hoc and sensor networks (2004), pp. 10-16. by Daniele Raffo, Cédric Adjih, Thomas Clausen, Paul Mühlethaler posted to advanced link-state linkstate olsr optimized-link-state-routing security signature by hgfernan on 2009-06-25 00:39:09 as along with 1 person burgod
	A redox signature score identifies diffuse large B-cell lymphoma patients with a poor prognosis. [My Copy] Blood, Vol. 106, No. 10. (15 November 2005), pp. 3594-3601. by M. E. Tome, D. B. Johnson, L. M. Rimsza, et al.R. A. Roberts, T. M. Grogan, T. P. Miller, L. W. Oberley, M. M. Briehl posted to lymphoma oxidative redox signature stress survival by songpku on 2009-06-21 19:41:48 as
	Black holes, cosmological singularities and change of signature [My Copy] Classical and Quantum Gravity, Vol. 12, No. 2. (1995), pp. 503-511. by Marcus Kriele, Jerome Martin posted to bh cosmology signature spacetime_singularities by NitinCR on 2009-06-20 23:42:23 as
	Genomic signatures to guide the use of chemotherapeutics [My Copy] Nature Medicine, Vol. 12, No. 11. (22 October 2006), pp. 1294-1300. by Anil Potti, Holly K. Dressman, Andrea Bild, et al.Richard F. Riedel, Gina Chan, Robyn Sayer, Janiel Cragun, Hope Cottrill, Michael J. Kelley, Rebecca Petersen, David Harpole, Jeffrey Marks, Andrew Berchuck, Geoffrey S. Ginsburg, Phillip Febbo, Johnathan Lancaster, Joseph R. Nevins posted to breast cancer chemotherapy expression gene response signature by songpku on 2009-06-15 15:43:06 as along with 7 people and 3 groups ipark-kaist guhjy kengg giovanni frohike mgaldzic jfr GeschwindLab CHIP Plantandetc
	Gene Expression Signatures of Radiation Response Are Specific, Durable and Accurate in Mice and Humans [My Copy] PLoS ONE, Vol. 3, No. 4. (2 April 2008), e1912. by Sarah K. Meadows, Holly K. Dressman, Garrett G. Muramoto, et al.Heather Himburg, Alice Salter, Zhengzheng Wei, Geoff Ginsburg, Nelson J. Chao, Joseph R. Nevins, John P. Chute posted to cross-species expression gene lukas radiation signature by ptrobajo on 2009-06-15 08:52:51 as

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cancer	128
breast	70
gene-expression	52
microarray	45
thelist	44
expression	37
prognosis	37
prediction	26
gene	20
breast-cancer	19
pathway	16
metastasis	15
review	15
classification	14
security	13
cancer-crosstalk	12
microrna	11
one-time	11
human	9
old-wine-new-bottle	9
statistics	9
blind	8
data	8
database	8
drug	8
molecular	8
motif	8
disease	7
domain	7
herman	7
pattern	7
profile	7
authentication	6
biomarker	6
digital	6
genome	6
genomic	6
mirna	6
pairings	6
rna	6
sequence	6
survival	6
tools	6
transcription	6
76-gene	5
chemotherapy	5
clinical	5
databank	5
diagnosis	5
gene_set_analysis	5
microarray_data_analysis	5
profiles	5
protein	5
regulatory	5
validation	5
70-gene	4
accumulators	4
age	4
aggressiveness	4
analysis	4
application	4
bank	4
discovery	4
functional	4
geneset	4
genetic	4
genome-wide	4
immune	4
modeling	4
mutants	4
negative	4
proliferation	4
prosite	4
records	4
signatures	4
superlist	4
background	3
binary	3
cetuximab	3
cns	3
coding	3
colorectal_cancer	3
complexity	3
development	3
embedding	3
encapsulation	3
epigenetics	3
function	3
hiding	3
interaction	3
message	3
meta_analysis	3
network	3
pgp	3
profiling	3
stream	3
stroma	3
therapy	3
verification	3
watermarking	3

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