Tag specificity [at least 200 articles] Export

Recent papers classified by the tag specificity.

	Generating specificity and diversity in the transcriptional response to hypoxia. [My Copy] Nature reviews. Genetics (3 November 2009) by Urban Lendahl, Kian Leong L. Lee, Henry Yang, Lorenz Poellinger posted to transcriptional to the specificity response in hypoxia generating diversity and by StemCellWorkstation on 2009-11-04 22:23:07 as
	Uniting pattern and process in plant-animal mutualistic networks: a review [My Copy] Ann Bot, Vol. 103, No. 9. (1 June 2009), pp. 1445-1457. by Diego P. Vazquez, Nico Bluthgen, Luciano Cagnolo, Natacha P. Chacoff posted to specificity pollination-community by cmm on 2009-11-04 22:17:19 as along with 1 person gilienv
	Metabolite and reaction inference based on enzyme specificities [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2975-2982. by M. J. L. de Groot, R. J. P. van Berlo, W. A. van Winden, P. J. T. Verheijen, M. J. T. Reinders, D. de Ridder posted to specificity similarity reaction promiscuity metabolic_networks metaboli enzyme chemical_fingerprints by pablocarb on 2009-11-04 17:31:21 as
	Evaluating cutpoints for the MHI-5 and MCS using the GHQ-12: a comparison of five different methods [My Copy] BMC Psychiatry, Vol. 8, No. 1. (2008), 10. by Mark Kelly, Frank Dunstan, Keith Lloyd, David Fone posted to specificity sf-36 sensitivity roc mcs depression by gareth on 2009-11-02 11:20:49 as
	Diacylglycerol Kinase Ïµ Is Selective for Both Acyl Chains of Phosphatidic Acid or Diacylglycerol [My Copy] Journal of Biological Chemistry, Vol. 284, No. 45. (6 November 2009), pp. 31062-31073. by Michael Lung, Yulia V. Shulga, Pavlina T. Ivanova, et al.David S. Myers, Stephen B. Milne, H. Alex Brown, Matthew K. Topham, Richard M. Epand posted to specificity regulation lung09pdf lipase fatty acid by paulschlesinger on 2009-10-30 19:18:29 as
	Profiling the Human Protein-DNA Interactome Reveals ERK2 as a Transcriptional Repressor of Interferon Signaling [My Copy] Vol. 139, No. 3. (30 October 2009), pp. 610-622. by Shaohui Hu, Zhi Xie, Akishi Onishi, et al.Xueping Yu, Lizhi Jiang, Jimmy Lin, Hee-sool Rho, Crystal Woodard, Hong Wang, Jun-Seop Jeong, Shunyou Long, Xiaofei He, Herschel Wade, Seth Blackshaw, Jiang Qian, Heng Zhu posted to specificity protein-dna-interactions motifs human data by pedrobeltrao on 2009-10-29 17:51:32 as along with 2 people and 1 group snow_dragon daveGerrard BergmanLab
	A comprehensive functional analysis of tissue specificity of human gene expression. [My Copy] BMC biology, Vol. 6, No. 1. (2008) by Z. Dezso, Y. Nikolsky, E. Sviridov, et al.W. Shi, T. Serebriyskaya, D. Dosymbekov, A. Bugrim, E. Rakhmatulin, R. J. Brennan, A. Guryanov, K. Li, J. Blake, R. R. Samaha, T. Nikolskaya posted to tissue specificity gene expression by dolchan on 2009-10-29 17:19:01 as along with 8 people and 1 group grahamc shikin jfr guhjy acanario inesdesantiago imina GeeSharpMinor GeneGo
	Tissue specificity and the human protein interaction network. [My Copy] Molecular systems biology, Vol. 5 (7 April 2009) by Alice Bossi, Ben Lehner posted to specificity protein network interaction context by dolchan on 2009-10-29 17:14:03 as along with 13 people jfr balicea poirel tmmurali diamantis phoenixzxl coela frohike Kubke renatomilani TRHvidsten grahamc sjung
	Specificity and Definiteness in Sentence and Discourse Structure [My Copy] J Semantics, Vol. 19, No. 3. (1 August 2002), pp. 245-274. by Klaus Von Heusinger posted to specificity referentiality indefinite definiteness by yllcheung on 2009-10-29 05:13:15 as
	OligoRAP - an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Pieter Bt B. Neerincx, Han Rauwerda, Haisheng Nie, Martien Am A. Groenen, Timo M. Breit, Jack Am A. Leunissen posted to webservices tool target specificity pipelines oligonucleotide microarray high-throughput annotation by bertelsen on 2009-10-28 12:07:39 as
	Structural Insight into Partner Specificity and Phosphoryl Transfer in Two-Component Signal Transduction [My Copy] Cell, Vol. 139, No. 2. (16 October 2009), pp. 325-336. by Patricia Casino, Vicente Rubio, Alberto Marina posted to specificity oct09 by mgomes on 2009-10-26 14:36:20 as
	P2CS: a two-component system resource for prokaryotic signal transduction research [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 315. by Mohamed Barakat, Philippe Ortet, Cecile J. Castelli, Mireille Ansaldi, Vincent Mejean, David Whitworth posted to specificity oct09 by mgomes on 2009-10-26 14:33:37 as along with 2 people barriot neils
	Evolution of prokaryotic two-component systems: insights from comparative genomics [My Copy] Amino Acids, Vol. 37, No. 3. (1 September 2009), pp. 459-466. by David Whitworth, Peter Cock posted to specificity oct09 by mgomes on 2009-10-26 14:32:45 as
	Rewiring the Specificity of Two-Component Signal Transduction Systems [My Copy] Cell, Vol. 133, No. 6. (13 June 2008), pp. 1043-1054. by Jeffrey M. Skerker, Barrett S. Perchuk, Albert Siryaporn, et al.Emma A. Lubin, Orr Ashenberg, Mark Goulian, Michael T. Laub posted to specificity oct09 by mgomes on 2009-10-26 13:23:54 as along with 4 people robfsouza RebeccaHamer jjray friendpine
	MicroRNA targeting specificity in mammals: determinants beyond seed pairing. [My Copy] Molecular cell, Vol. 27, No. 1. (6 July 2007), pp. 91-105. by Andrew Grimson, Kyle Kai-How K. Farh, Wendy K. Johnston, Philip Garrett-Engele, Lee P. Lim, David P. Bartel posted to target specificity seed microrna mammals by ealloza on 2009-10-26 12:42:40 as along with 11 people and 2 groups hcoller fishtank provero giovenko jfr andersbj zwang bootsy heliopais fpattyn maralena cube_and_beyond microRNA
	Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins [My Copy] PLoS Biology, Vol. 7, No. 10. (20 October 2009), e1000218. by Raffi Tonikian, Xiaofeng Xin, Christopher P. Toret, et al.David Gfeller, Christiane Landgraf, Simona Panni, Serena Paoluzi, Luisa Castagnoli, Bridget Currell, Somasekar Seshagiri, Haiyuan Yu, Barbara Winsor, Marc Vidal, Mark B. Gerstein, Gary D. Bader, Rudolf Volkmer, Gianni Cesareni, David G. Drubin, Philip M. Kim, Sachdev S. Sidhu, Charles Boone posted to specificity sh3 scerevisiae motifs data bioinformatics by pedrobeltrao on 2009-10-21 21:45:29 as along with 2 people venancio cabbagesofdoom
	Innate and adaptive immunity: specificities and signaling hierarchies revisited [My Copy] Nature Immunology, Vol. 6, No. 1. (20 December 2004), pp. 17-21. by Eric Vivier, Bernard Malissen posted to theory specificity innate-immune immune adaptive_immune_system by tomhebbron on 2009-10-21 13:28:22 as
	Sequence comparison by sequence harmony identifies subtype-specific functional sites. [My Copy] Nucleic acids research, Vol. 34, No. 22. (December 2006), pp. 6540-6548. by W. Pirovano, K. A. Feenstra, J. Heringa posted to specificity oct09 by mgomes on 2009-10-19 16:42:46 as along with 4 people and 2 groups jameswasmuth marcius sriram_s marti BioinfoCIPF SGU-CIPF
	How Protein Stability and New Functions Trade Off [My Copy] PLoS Comput Biol, Vol. 4, No. 2. (29 February 2008), e1000002. by Nobuhiko Tokuriki, Francois Stricher, Luis Serrano, Dan S. Tawfik posted to stability specificity protein promiscuity mutations function foldx enzyme energy catalytic affinity by pablocarb on 2009-09-30 15:59:00 as along with 4 people GermanErlenkamp pinney orr aalibes
	Specificity and Completion Time Distributions of Biochemical Processes [My Copy] (14 Sep 2009) by Brian Munsky, Golan Bel, Ilya Nemenman posted to systems stochastic specificity processes model kinetic-proofreading dynamical-systems chemical-master-equation biology biochemical analytical by bertelsen on 2009-09-21 16:13:25 as along with 1 person jjray
	14-3-3s are DNA-replication proteins. [My Copy] Biochemical Society transactions, Vol. 30, No. 4. (August 2002), pp. 397-401. by M. Zannis-Hadjopoulos, O. Novac, D. Alvarez, G. B. Price posted to specificity phosphorylation isoform dimerization 14-3-3 by nns1987 on 2009-09-15 14:24:54 as along with 3 people roboonya coldmeadow guhjy
	Functional specificity in 14-3-3 isoform interactions through dimer formation and phosphorylation. Chromosome location of mammalian isoforms and variants. [My Copy] Plant molecular biology, Vol. 50, No. 6. (December 2002), pp. 993-1010. by Alastair Aitken posted to structure specificity phosphorylation isoform dimerization 14-3-3 by nns1987 on 2009-09-15 14:23:06 as
	A structural basis for 14-3-3sigma functional specificity. [My Copy] The Journal of biological chemistry, Vol. 280, No. 19. (13 May 2005), pp. 18891-18898. by Erik W. Wilker, Robert A. Grant, Stephen C. Artim, Michael B. Yaffe posted to structure specificity homodimers 14-3-3sigma by nns1987 on 2009-09-15 14:15:10 as along with 1 person and 1 group cdppublications CDP
	Continuous cultures of fused cells secreting antibody of predefined specificity [My Copy] Nature, Vol. 256, No. 5517. (7 August 1975), pp. 495-497. by G. Köhler, C. Milstein posted to specificity immunology antibody by VGreiff on 2009-09-09 09:10:22 as along with 1 person tomhebbron
	What does systems biology mean for drug development? [My Copy] Current medicinal chemistry, Vol. 15, No. 15. (2008), pp. 1520-1528. by André Schrattenholz, Vukić Soskić posted to systems-biology stochasticity specificity review pharmacogenomic multi-target drug-discovery drug disease complexity affinity by bertelsen on 2009-09-05 10:47:26 as along with 1 person flbarroso
	Sensitivity and specificity should be de-emphasized in diagnostic accuracy studies. [My Copy] Academic radiology, Vol. 10, No. 6. (June 2003), pp. 670-672. by Karel G. Moons, Frank E. Harrell posted to specificity sensitivity diagnostic accuracy by benvancalster on 2009-09-04 13:33:31 as
	Geographic locality and host identity shape fungal endophyte communities in cupressaceous trees. [My Copy] Mycological research, Vol. 112, No. Pt 3. (March 2008), pp. 331-344. by Michele T. Hoffman, A. Elizabeth Arnold posted to specificity endophyte by maren on 2009-08-29 17:27:27 as
	Understanding sensitivity and specificity with the right side of the brain [My Copy] BMJ, Vol. 327, No. 7417. (27 September 2003), pp. 716-719. by Tze-Wey Loong posted to testing specificity sensitivity quality control by RTstudentextraordinare on 2009-08-25 10:59:06 as along with 5 people jeffkd nedwards trevkrog kuhn maximilianh
	Intermolecular and intramolecular readout mechanisms in protein-DNA recognition. [My Copy] Journal of molecular biology, Vol. 337, No. 2. (19 March 2004), pp. 285-294. by M. Michael Gromiha, Jörg G. Siebers, Samuel Selvaraj, Hidetoshi Kono, Akinori Sarai posted to specificity protein-dna indirect direct by svozil to the group Bioinformatics on 2009-08-17 15:18:49 as
	The Challenge of Prediction in Information Systems Research [My Copy] Social Science Research Network Working Paper Series (27 March 2008) by Galit Shmueli, Otto Koppius posted to specificity modelling explanatory by tomhebbron on 2009-08-12 10:04:00 as
	Specificity in protein interactions and its relationship with sequence diversity and coevolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 19. (8 May 2007), pp. 7999-8004. by Luke Hakes, Simon C. Lovell, Stephen G. Oliver, David L. Robertson posted to specificity interaction_evolution coevolution by chica on 2009-08-11 17:02:48 as along with 14 people and 2 groups mgomes diamantis dullhunk marti stevanspringer bjorns cjeans zwang Garamonfok cursonivel1 tale winterschlaefer phoenixzxl chrys FAB-lab cursonivel1
	Mapping the Limits of Substrate Specificity of the Adenylation Domain of TycA [My Copy] ChemBioChem, Vol. 10, No. 4. (2009), pp. 671-682. by Benoit R. M. Villiers, Florian Hollfelder posted to directed_evolution specificity by maiko on 2009-08-04 09:42:46 as along with 1 person cychen_cite
	Cell-specificity of transforming growth factor-beta response is dictated by receptor bioavailability. [My Copy] Journal of molecular endocrinology, Vol. 36, No. 3. (June 2006), pp. 591-600. by M. I. Suszko, T. K. Woodruff posted to specificity tgfb tgfbr by guhjy on 2009-07-30 14:00:05 as
	Specificity and versatility in tgf-beta signaling through Smads. [My Copy] Annual review of cell and developmental biology, Vol. 21 (2005), pp. 659-693. by X. H. Feng, R. Derynck posted to smad specificity tgfb tgfbr by guhjy on 2009-07-30 13:59:29 as
	Protein promiscuity and its implications for biotechnology [My Copy] Nature Biotechnology, Vol. 27, No. 2. (09 February 2009), pp. 157-167. by Irene Nobeli, Angelo D. Favia, Janet M. Thornton posted to ppi protein specificity by guhjy on 2009-07-30 02:53:08 as along with 5 people and 1 group bdessailly pablocarb pauldobson renatomilani dbikard Orengo Group Journal Picks
	TGF-beta receptor levels regulate the specificity of signaling pathway activation and biological effects of TGF-beta. [My Copy] Biochimica et biophysica acta, Vol. 1793, No. 7. (July 2009), pp. 1165-1173. by Andres Rojas, Malla Padidam, Dean Cress, William M. Grady posted to apoptosis erk p21 specificity tgfb tgfbr by guhjy on 2009-07-29 04:40:56 as
	Demand Uncertainty, Capital Specificity, and Industry Evolution [My Copy] Ind Corp Change, Vol. 1, No. 1. (1 January 1992), pp. 235-262. by S. A. Lippman, R. P. Rumelt posted to capital demand evolution industry specificity uncertainty by derchao on 2009-07-24 01:54:14 as
	From Specificity to Sensitivity: How Acute Stress Affects Amygdala Processing of Biologically Salient Stimuli [My Copy] Biological Psychiatry (12 July 2009) by Hein J. F. van Marle, Erno J. Hermans, Shaozheng Qin, Guillén Fernández posted to amygdala sensitivity specificity stress by prerona on 2009-07-22 10:40:21 as
	A statistical interpretation of term specificity and its application in retrieval [My Copy] Journal of Documentation, Vol. 28, No. 1. (1972), pp. 11-20. by Karen S. Jones posted to filters ir specificity by msampson on 2009-07-14 17:35:49 as along with 1 person abellogin
	A new approach for selective rat endolymphatic sac epithelium collection to obtain pure specific RNA. [My Copy] Biochemical and biophysical research communications, Vol. 376, No. 3. (21 November 2008), pp. 611-614. by K. Akiyama, T. Miyashita, A. Matsubara, et al.T. Mori, R. Inamoto, A. Nishiyama, N. Mori posted to dissection endolymphatic-sac inner-ear rats specificity by bertelsen on 2009-07-14 17:25:23 as
	Salmonellosis Outcomes Differ Substantially by Serotype [My Copy] The Journal of Infectious Diseases, Vol. 198, No. 1. (1 July 2008), pp. 109-114. by Timothy f Jones, L. . Amanda Ingram, Paul r Cieslak, et al.Duc j Vugia, Melissa Tobin‐d’angelo, Sharon Hurd, Carlota Medus, Alicia Cronquist, Frederick j Angulo posted to disease host invasive salmonella specificity by katholt on 2009-07-14 14:36:37 as along with 2 people arooney Amazoness
	The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1293-1299. by Hao Zhang, Ole Lund, Morten Nielsen posted to binding mhc peptide prediction specificity by neils on 2009-07-12 13:19:59 as along with 4 people niallhaslam beapen reyez carlosjavierna
	Identification of specificity and promiscuity of PDZ domain interactions through their dynamic behavior [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2009), NA. by Z. Nevin Gerek, Ozlem Keskin, S. Banu Ozkan posted to domain dynamics pdz peptide specificity by neils on 2009-07-10 01:21:31 as
	Intrinsic Disorder in Protein Interactions: Insights From a Comprehensive Structural Analysis [My Copy] PLoS Comput Biol, Vol. 5, No. 3. (13 March 2009), e1000316. by Jessica H. Fong, Benjamin A. Shoemaker, Sergiy O. Garbuzynskiy, Michail Y. Lobanov, Oxana V. Galzitskaya, Anna R. Panchenko posted to enzyme-promis-paper disorder interactions promiscuity specificity structural by pablocarb on 2009-07-06 11:06:50 as along with 7 people kiekyon agustinarce chica phoenixzxl zwang bobychan bpcusack
	Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in <italic>Caenorhabditis elegans</italic> [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (19 June 2009), e1000417. by Maria D. Chikina, Curtis Huttenhower, Coleen T. Murphy, Olga G. Troyanskaya posted to specificity vesicle_transport by phoenixzxl on 2009-07-02 03:59:27 as along with 4 people grahamc biomcgary roys oelemento
	From Promiscuity to Precision: Protein Phosphatases Get a Makeover [My Copy] Molecular Cell, Vol. 33, No. 5. (13 March 2009), pp. 537-545. by David M. Virshup, Shirish Shenolikar posted to phosphatase review specificity substrate by neils on 2009-07-02 03:31:36 as along with 2 people kiekyon coela
	Specificity and evolvability in eukaryotic protein interaction networks. [My Copy] PLoS computational biology, Vol. 3, No. 2. (16 February 2007), e25. by Pedro Beltrao, Luis Serrano posted to evolvability network_evolution specificity by chica on 2009-07-01 11:49:22 as along with 6 people saket kiekyon marti aalibes dylan77 aheilbut
	Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity. [My Copy] Algorithms for molecular biology : AMB, Vol. 4, No. 1. (22 April 2009), 7. by Koji Kadota, Yuji Nakai, Kentaro Shimizu posted to affymetrix differential expression gene-expression normalization pre-processing ranking reproducibility sensitivity specificity by bertelsen on 2009-06-26 22:01:52 as along with 5 people ericrpaquet daforerog dswan renatomilani lptolik
	Body mass definitions of obesity: sensitivity and specificity using self-reported weight and height. [My Copy] Epidemiology (Cambridge, Mass.), Vol. 1, No. 2. (March 1990), pp. 146-152. by F. J. Nieto-García, T. L. Bush, P. M. Keyl posted to sensitivity specificity teaching by gareth on 2009-06-26 12:46:41 as
	Reciprocal specialization in ecological networks [My Copy] Ecology Letters, Vol. 12, No. 9. (2009), pp. 961-969. by Lucas N. Joppa, Jordi Bascompte, Jose M. Montoya, Ricard V. Solé, Jim Sanderson, Stuart L. Pimm posted to food-web specialization specificity by timothee-poisot on 2009-06-23 11:28:13 as along with 4 people tkeitt maren alternanthera iBartomeus

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sensitivity	47
prediction	22
protein	19
pdfi	16
review	16
structure	16
binding	14
evolution	14
kinase	14
outside	14
rehabilitation	13
expression	11
statistics	11
substrate	11
affinity	10
bioinformatics	10
false-negatives	9
falsepositives	9
neurology_physical_therapy	9
reproducibility	9
risk	9
risk-factors	9
tissue	9
algorithms	8
analysis	8
microarray	8
of	8
physical_therapy	8
snare	8
data	7
differential	7
pdz	7
phosphorylation	7
crosstalk	6
domain	6
electrostatics	6
enzyme	6
interaction	6
molecular	6
peptide	6
post-defense	6
promiscuity	6
results	6
sh3	6
automated	5
balance_equilibrium_examination	5
coiled_coil	5
computational	5
computer-assisted	5
connections	5
disease	5
domains	5
examination	5
fall_risk	5
function	5
genomics	5
humans	5
image	5
interpretation	5
isoform	5
motifs	5
oct09	5
pattern	5
peptides	5
recognition	5
selectivity	5
bzip	4
computer	4
context	4
dna	4
dynamics	4
engineering	4
enzyme-promis-paper	4
evolution-plant	4
gene	4
homology	4
hybridization	4
immune	4
information	4
kinases	4
motif	4
pharmacology	4
pollination	4
pollinator-efficiency	4
pollinator-specificity	4
processing	4
promoter	4
sequence	4
signalling	4
stability	4
tgfb	4
tgfbr	4
tools	4
acid	3
drosophila	3
product	3
signal	3
subtraction	3
technique	3
transforms	3

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