Tag splice [42 articles] Export

Recent papers classified by the tag splice.

	Importance of RNA secondary structure information for yeast donor and acceptor splice site predictions by neural networks [My Copy] Computational Biology and Chemistry, Vol. 30, No. 1. (February 2006), pp. 50-57. by S. Marashi, H. Goodarzi, M. Sadeghi, C. Eslahchi, H. Pezeshk posted to splice site neural networks by marashi on 2009-10-15 09:40:43 as along with 1 person raylim
	Regulation of MYCN expression in human neuroblastoma cells. [My Copy] BMC cancer, Vol. 9 (2009) by Joannes F. Jacobs, Hans van Bokhoven, Frank N. van Leeuwen, et al.Christina A. Hulsbergen-van de Kaa, I. Jolanda de Vries, Gosse J. Adema, Peter M. Hoogerbrugge, Arjan P. de Brouwer posted to expression mycn neuroblastoma splice transcript variant by fpattyn to the group Neuroblastoma on 2009-08-10 09:37:01 as
	Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing [My Copy] Nature Genetics, Vol. 40, No. 12. (02 November 2008), pp. 1413-1415. by Qun Pan, Ofer Shai, Leo J. Lee, Brendan J. Frey, Benjamin J. Blencowe posted to alternative rna-seq splice by ThomasDOtto on 2009-06-25 13:36:04 as along with 21 people ongenetics hzoltan torfinnnome n00c ericrpaquet jonilaserson giovanni frohike fenghezi jfr zxmon21 jmcq poschm wimufi xingxu inesdesantiago jbhiatt rschulz djkt dchughes GeeSharpMinor
	TopHat: discovering splice junctions with RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1105-1111. by Cole Trapnell, Lior Pachter, Steven L. Salzberg posted to rna-seq site splice tool by ThomasDOtto on 2009-06-25 13:33:36 as along with 27 people and 2 groups idonaldson ongenetics juokcho cthachuk hzoltan jwfoley heliopais dakelley druvus GustavoLacerda stubrown polivares torfinnnome jmcq mtagaya jonilaserson gdb guhjy n00c ghattem xingxu djkt vplagnol bertelsen natstreet idoerg vmsr BergmanLab SIMR bioinformatics
	Genetic diagnosis of familial hypercholesterolaemia: the importance of functional analysis of potential splice-site mutations [My Copy] J Med Genet, Vol. 46, No. 5. (1 May 2009), pp. 352-357. by M. Bourbon, M. A. Duarte, A. C. Alves, A. M. Medeiros, L. Marques, A. K. Soutar posted to fh functional splice by johnny7 on 2009-05-05 09:50:52 as
	Control systems software [My Copy] Automatic Control, IEEE Transactions on In Automatic Control, IEEE Transactions on, Vol. 38, No. 7. (06 August 2002), pp. 1094-1106. by M. Boasson posted to control splice system by martinrytter on 2009-03-18 13:34:36 as along with 1 person gvdh
	Human-mouse comparative analysis reveals that branch-site plasticity contributes to splicing regulation [My Copy] Hum. Mol. Genet., Vol. 14, No. 11. (1 June 2005), pp. 1559-1568. by Guy Kol, Galit Lev-Maor, Gil Ast posted to splice by myourshaw on 2008-09-13 03:42:51 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	Splicing regulation: From a parts list of regulatory elements to an integrated splicing code. [My Copy] RNA (New York, N.Y.) (27 March 2008) by Zefeng Wang, Christopher B B. Burge posted to splice by myourshaw on 2008-09-12 18:35:43 as along with 1 person bootsy
	Human branch point consensus sequence is yUnAy. [My Copy] Nucleic acids research, Vol. 36, No. 7. (April 2008), pp. 2257-2267. by K. Gao, A. Masuda, T. Matsuura, K. Ohno posted to splice by myourshaw on 2008-09-12 18:23:29 as along with 1 person raistrick
	Automatic detection of exonic splicing enhancers (ESEs) using SVMs [My Copy] BMC Bioinformatics, Vol. 9 (10 September 2008), 369. by Britta Mersch, Alexander Gepperth, Sandor Suhai, Agnes Hotz-Wagenblatt posted to alternative exon splice splicing by trevinor on 2008-09-11 23:00:21 as along with 1 person mtagaya
	Antagonistic Effects of the SRp30c Protein and Cryptic 5 ' Splice Sites on the Alternative Splicing of the Apoptotic Regulator Bcl-x [My Copy] J. Biol. Chem., Vol. 283, No. 31. (1 August 2008), pp. 21315-21324. by Philippe Cloutier, Johanne Toutant, Lulzim Shkreta, Serge Goekjian, Timothee Revil, Benoit Chabot posted to alternate bclxl sites splice by paulschlesinger on 2008-08-05 01:45:15 as
	Splice site identification by idlBNs. [My Copy] Bioinformatics (Oxford, England), Vol. 20 Suppl 1 (4 August 2004) by R. Castelo, R. Guigó posted to bayseian bioe594 site splice by kallberg on 2008-06-17 20:18:32 as
	Heritability of alternative splicing in the human genome [My Copy] Genome Res., Vol. 17, No. 8. (1 August 2007), pp. 1210-1218. by Tony Kwan, David Benovoy, Christel Dias, et al.Scott Gurd, David Serre, Harry Zuzan, Tyson A. Clark, Anthony Schweitzer, Michelle K. Staples, Hui Wang, John E. Blume, Thomas J. Hudson, Rob Sladek, Jacek Majewski posted to affy exonarray splice transcriptomic by nicholso on 2008-04-24 10:03:27 as along with 8 people and 3 groups dchughes xingxu msomel caseybrown jo_davies ramensky popgen guhjy Bioinformatics G4ID Genetics-of-Gambling
	Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays. [My Copy] Cancer Res, Vol. 67, No. 12. (15 June 2007), pp. 5635-5642. by P. J. French, J. Peeters, S. Horsman, et al.E. Duijm, I. Siccama, M. J. van den Bent, T. M. Luider, J. M. Kros, P. van der Spek, P. A. Sillevis Smitt posted to affy exonarray splice transcriptomic by nicholso on 2008-03-11 14:22:27 as along with 1 person srp33
	Genome-wide analysis of transcript isoform variation in humans [My Copy] Nat Genet, Vol. 40, No. 2. (13 February 2008), pp. 225-231. by Tony Kwan, David Benovoy, Christel Dias, et al.Scott Gurd, Cathy Provencher, Patrick Beaulieu, Thomas J. Hudson, Rob Sladek, Jacek Majewski posted to affy ceph exonarray splice transcriptomic by nicholso on 2008-03-11 14:20:58 as along with 11 people ericrpaquet athma cajunsushi inesdesantiago GeeSharpMinor jo_davies caseybrown stoffreg meiklej vplagnol guhjy
	The impact of multiple splice sites in human L1 elements [My Copy] Gene, Vol. 411, No. 1-2. (31 March 2008), pp. 38-45. by V. P. Belancio, A. M. Roy-Engel, P. Deininger posted to human l1 sites splice by paulcartwright to the group BergmanLab on 2008-03-03 17:29:39 as along with 1 person dchughes
	Microarray analysis of alternative splicing. [My Copy] OMICS, Vol. 10, No. 3. (2006), pp. 344-357. by M. Cuperlovic-Culf, N. Belacel, A. S. Culf, R. J. Ouellette posted to review splice transcriptomic by nicholso on 2008-03-01 12:36:27 as along with 1 person jfr
	Third isoform of the prostaglandin-E-receptor EP3 subtype with different C-terminal tail coupling to both stimulation and inhibition of adenylate cyclase [My Copy] Eur J Biochem, Vol. 217, No. 1. (1 October 1993), pp. 313-318. by A. Irie, Y. Sugimoto, T. Namba, et al.A. Harazono, A. Honda, A. Watabe, M. Negishi, S. Narumiya, A. Ichikawa posted to and mep3 properties splice variants by jddowney on 2007-06-25 23:04:59 as
	Different membrane targeting of prostaglandin EP3 receptor isoforms dependent on their carboxy-terminal tail structures [My Copy] FEBS Letters, Vol. 473, No. 1. (4 May 2000), pp. 76-80. by Hiroshi Hasegawa, Hironori Katoh, Yoshiaki Yamaguchi, Kazuhiro Nakamura, Satoshi Futakawa, Manabu Negishi posted to ep3 mouse splice variants by jddowney on 2007-06-25 23:00:40 as
	Asymmetric TCP Splice: A Kernel Mechanism to Increase the Flexibility of TCP Splice [My Copy] by Saibal K. Adhya posted to splice by hoebus on 2007-04-10 04:12:00 as
	Symmetric TCP Splice: A Kernel Mechanism For [My Copy] by High P. Relaying posted to splice by hoebus on 2007-04-10 04:11:27 as
	MSOCKS: an architecture for transport layer mobility [My Copy] INFOCOM '98. Seventeenth Annual Joint Conference of the IEEE Computer and Communications Societies. Proceedings. IEEE, Vol. 3 (1998), pp. 1037-1045 vol.3. by D. A. Maltz, P. Bhagwat posted to splice by hoebus on 2007-04-10 03:43:37 as
	Fault-tolerant and scalable TCP splice and web server architecture [My Copy] Reliable Distributed Systems, 2006. SRDS '06. 25th IEEE Symposium on (2006), pp. 301-310. by M. Marwah, S. Mishra, C. Fetzer posted to splice by hoebus on 2007-04-10 03:33:27 as
	Compensatory relationships between splice sites and exonic splicing signals depending on the length of vertebrate introns [My Copy] BMC Genomics, Vol. 7 (08 December 2006), 311. by Colin N. Dewey, Igor B. Rogozin, Eugene V. Koonin posted to regulation splice by brant on 2006-12-13 14:44:29 as along with 1 group EisenLab
	The cyclin D1b splice variant: an old oncogene learns new tricks [My Copy] Cell Division, Vol. 1 (24 July 2006), 15. by Karen E. Knudsen posted to cdk cdk4 cdk6 cycd cyclin d1b oncogene splice transcrption variant by xico to the group WetBiology on 2006-12-04 17:20:45 as
	Impact of RNA structure on the prediction of donor and acceptor splice sites [My Copy] BMC Bioinformatics, Vol. 7 (13 June 2006), 297. by Sayed-Amir Marashi, Changiz Eslahchi, Hamid Pezeshk, Mehdi Sadeghi posted to rna sites splice structure by papamicd on 2006-06-28 17:39:10 as along with 2 people marashi raylim
	An amazing sequence arrangement at the 5' ends of adenovirus 2 messenger RNA. [My Copy] Cell, Vol. 12, No. 1. (September 1977), pp. 1-8. by L. T. Chow, R. E. Gelinas, T. R. Broker, R. J. Roberts posted to historical_article splice by Cortel on 2005-11-25 09:34:34 as
	Spliced segments at the 5' terminus of adenovirus 2 late mRNA. [My Copy] Proc Natl Acad Sci U S A, Vol. 74, No. 8. (August 1977), pp. 3171-3175. by S. M. Berget, C. Moore, P. A. Sharp posted to historical_article splice by Cortel on 2005-11-25 09:31:14 as
	Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. [My Copy] Science (New York, N.Y.), Vol. 302, No. 5653. (19 December 2003), pp. 2141-2144. by J. M. Johnson, J. Castle, P. Garrett-Engele, et al.Z. Kan, P. M. Loerch, C. D. Armour, R. Santos, E. E. Schadt, R. Stoughton, D. D. Shoemaker posted to as microarray splice by Cortel on 2005-11-24 09:53:08 as along with 8 people and 2 groups rshe daforerog kaspermunch jwestbrook mimulus_99 jo_davies antonkratz austin Bioinformatics King_Lab
	Splicing-dependent and -independent modes of assembly for intron-encoded box C/D snoRNPs in mammalian cells. [My Copy] Mol Cell, Vol. 12, No. 1. (July 2003), pp. 113-123. by T. Hirose, M. D. Shu, J. A. Steitz posted to ejc regulation splice by Cortel on 2005-06-30 09:18:50 as
	Splicing of U12-type introns deposits an exon junction complex competent to induce nonsense-mediated mRNA decay. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 52. (28 December 2004), pp. 17976-17981. by T. Hirose, M. D. Shu, J. A. Steitz posted to ejc nmd regulation splice by Cortel on 2005-06-30 09:18:11 as
	Determinants of the inherent strength of human 5' splice sites. [My Copy] RNA, Vol. 11, No. 5. (May 2005), pp. 683-698. by Xavier Roca, Ravi Sachidanandam, Adrian R. Krainer posted to 5splice_sites regulation splice by Cortel on 2005-06-27 10:23:10 as along with 1 person ongenetics
	Function of alternative splicing. [My Copy] Gene, Vol. 344 (3 January 2005), pp. 1-20. by Stefan Stamm, S. Ben-Ari, Rafalska, et al.Y. Tang, Z. Zhang, D. Toiber, T. A. Thanaraj, H. Soreq posted to as function isoforms localization splice by Cortel on 2005-06-27 08:16:12 as
	How did alternative splicing evolve? [My Copy] Nat Rev Genet, Vol. 5, No. 10. (October 2004), pp. 773-782. by G. Ast posted to as evo splice by Cortel on 2005-06-16 09:40:12 as along with 7 people and 1 group greg GloriaFu macowell setar radek balicea grahamc BUiGEM
	Regulation of alternative pre-mRNA splicing. [My Copy] Brief Funct Genomic Proteomic, Vol. 1, No. 3. (October 2002), pp. 266-277. by L. Woodley, J. Valcárcel posted to regulation splice by Cortel on 2005-06-12 13:39:21 as along with 1 person greg
	A computational and experimental approach toward a priori identification of alternatively spliced exons. [My Copy] RNA, Vol. 10, No. 12. (December 2004), pp. 1838-1844. by D. L. Philipps, J. W. Park, B. R. Graveley posted to exon splice by Cortel on 2005-06-12 13:38:04 as along with 1 person greg
	Aberrant and alternative splicing in cancer. [My Copy] Cancer Res, Vol. 64, No. 21. (1 November 2004), pp. 7647-7654. by J. P. Venables posted to as cancer diversity isoforms splice by Cortel on 2005-05-19 10:13:17 as along with 3 people greg GloriaFu srp33
	Patterns that define the four domains conserved in known and novel isoforms of the protein import receptor Tom20. [My Copy] J Mol Biol, Vol. 347, No. 1. (18 March 2005), pp. 81-93. by V. A. Likić, A. Perry, J. Hulett, et al.M. Derby, A. Traven, R. F. Waller, P. J. Keeling, C. M. Koehler, S. P. Curran, P. R. Gooley, T. Lithgow posted to as isoforms splice by Cortel on 2005-05-19 10:06:57 as along with 1 person pansapiens
	Large-scale analysis of human alternative protein isoforms: pattern classification and correlation with subcellular localization signals [My Copy] Nucleic Acids Research, Vol. 33, No. 8. (2005), pp. 2355-2363. by Mitsuteru Nakao, Roberto A. Barrero, Yuri Mukai, Chie Motono, Makiko Suwa, Kenta Nakai posted to as author database diversity isoforms localization splice subcellular transcript by Cortel on 2005-05-19 10:05:06 as
	The impact of very short alternative splicing on protein structures and functions in the human genome. [My Copy] Trends Genet, Vol. 20, No. 5. (May 2004), pp. 232-236. by F. Wen, F. Li, H. Xia, X. Lu, X. Zhang, Y. Li posted to as diversity isoforms splice transcript by Cortel on 2005-05-19 09:37:25 as along with 1 person setar
	A microarray configuration to quantify expression levels and relative abundance of splice variants [My Copy] Nucleic Acids Research, Vol. 33, No. 5. (2005), pp. e47-e47. by Pascale Fehlbaum, Caroline Guihal, Laurent Bracco, Olivier Cochet posted to isoforms splice by Cortel on 2005-05-08 14:46:57 as
	Tissue-dependent isoforms of mammalian Fox-1 homologs are associated with tissue-specific splicing activities [My Copy] Nucleic Acids Research, Vol. 33, No. 7. (2005), pp. 2078-2089. by Shingo Nakahata, Sachiyo Kawamoto posted to isoforms splice tissue-specific by Cortel on 2005-05-08 14:44:25 as

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as	7
isoforms	7
regulation	6
sites	4
transcript	4
transcriptomic	4
variant	4
affy	3
diversity	3
exonarray	3
rna-seq	3
site	3
alternative	2
cdk	2
cdk4	2
cdk6	2
cycd	2
cyclin	2
d1b	2
ejc	2
exon	2
expression	2
historical_article	2
human	2
l1	2
localization	2
mycn	2
neuroblastoma	2
oncogene	2
transcrption	2
variants	2
5splice_sites	1
alternate	1
author	1
bayseian	1
bcb716	1
bclxl	1
bioe594	1
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ep3	1
evo	1
fh	1
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junction	1
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mep3	1
microarray	1
mouse	1
networks	1
neural	1
nmd	1
pachter	1
properties	1
review	1
rna	1
salzberg	1
splicing	1
structure	1
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tissue-specific	1
tool	1
tophat	1
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