Tag statistical_mechanics [at least 200 articles] Export

Recent papers classified by the tag statistical_mechanics.

	Algorithmic design of self-assembling structures [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 24. (16 June 2009), pp. 9570-9575. by Henry Cohn, Abhinav Kumar posted to statistical_mechanics mathematical_proof coding_and_information_theory algorithm by ajholanda on 2009-11-25 10:45:46 as along with 3 people Scis0000002 RamuAnandakrishnan mstumpf
	Variational Principle for the Pareto Power Law [My Copy] Physical Review Letters, Vol. 103, No. 22. (2009), 228701. by Anirban Chakraborti, Marco Patriarca posted to statistical_mechanics complex_systems by andreassorge on 2009-11-24 18:12:38 as along with 2 people jsaramak tessonec
	A quantum solution to the arrow-of-time dilemma [My Copy] (25 Aug 2009) by Lorenzo Maccone posted to time_reversal thermodynamics statistical_mechanics quantum_mechanics entropy arrow_of_time by tictacgo on 2009-11-24 17:27:40 as along with 2 people janpaniev sflammia
	Multivariate stable polynomials: theory and applications [My Copy] (18 Nov 2009) by David G. Wagner posted to survey statistical_mechanics combinatorics by navingoyal on 2009-11-19 05:02:53 as
	Statistical mechanical theory for nonequilibrium systems. X. Nonequilibrium phase transitions [My Copy] The Journal of Chemical Physics, Vol. 131, No. 18. (2009), 184509. by Phil Attard posted to thermodynamics theory statistical_mechanics physics phase_transition non-equilibrium entropy by jjray on 2009-11-14 16:54:57 as along with 1 person paulschlesinger
	Statistical mechanics of the neocortex [My Copy] Progress in Biophysics and Molecular Biology, Vol. 99, No. 2-3. (18 February 2009), pp. 53-86. by Michael A. Buice, Jack D. Cowan posted to statistical_mechanics computational_modelling by tyrell_turing on 2009-11-11 10:08:47 as along with 1 person davidcsterratt
	Ion distribution around a charged rod in one and two component solvents: Preferential solvation and first order ionization phase transition [My Copy] The Journal of Chemical Physics, Vol. 131, No. 9. (2009), 094905. by Ryuichi Okamoto, Akira Onuki posted to statistical_mechanics solvation electrostatics by sobolevnrm on 2009-10-31 00:37:11 as
	Theoretical Isotherms for Adsorption on a Square Lattice [My Copy] The Journal of Chemical Physics, Vol. 8, No. 6. (1940), pp. 477-489. by Lewi Tonks posted to statistical_mechanics by sobolevnrm on 2009-10-31 00:14:29 as
	Dynamics of neuronal populations: eigenfunction theory; some solvable cases. [My Copy] Network (Bristol, England), Vol. 14, No. 2. (May 2003), pp. 249-272. by Lawrence Sirovich posted to statistical_mechanics network_dynamics by fbaroni on 2009-10-29 19:07:07 as
	Ion-mediated interactions in suspensions of oppositely charged nanoparticles [My Copy] The Journal of Chemical Physics, Vol. 131, No. 8. (2009), 084902. by Vincent Dahirel, Jean P. Hansen posted to statistical_mechanics electrostatics beyond_mean_field by sobolevnrm on 2009-10-29 14:03:27 as
	Complex plasmas: An interdisciplinary research field [My Copy] Reviews of Modern Physics, Vol. 81, No. 4. (2009), 1353. by Gregor E. Morfill, Alexei V. Ivlev posted to statistical_mechanics review electrostatics by sobolevnrm on 2009-10-25 19:26:40 as
	Entropic trends in aqueous solutions of the common functional groups [My Copy] Faraday Discuss. (2010) by Sheeba J. Irudayam, Richard D. Plumb, Richard H. Henchman posted to statistical_mechanics solvation by sobolevnrm on 2009-10-24 22:41:48 as
	Efficient exploration of energy landscapes [My Copy] (14 Oct 2009) by Martin Mann, Konstantin Klemm posted to statistical_mechanics by apocapoc on 2009-10-24 22:12:11 as along with 2 people Fernando_FF Diego_Prada
	Beyond Poisson-Boltzmann: Fluctuation effects and correlation functions [My Copy] The European Physical Journal E: Soft Matter and Biological Physics, Vol. 1, No. 2. (19 February 2000), pp. 203-214. by R. R. Netz, H. Orland posted to statistical_mechanics electrostatics beyond_mean_field by sobolevnrm on 2009-10-16 13:34:17 as along with 1 person onufriev
	Mori-Zwanzig formalism as a practical computational tool [My Copy] Faraday Discuss. (2010) by Carmen Hijon, Pep Espanol, Eric Vanden-Eijnden, Rafael Delgado-Buscalioni posted to statistical_mechanics molecular_simulation by sobolevnrm on 2009-10-15 12:33:18 as
	Boltzmann's Dilemma: An Introduction to Statistical Mechanics via the Kac Ring [My Copy] SIAM Review, Vol. 51, No. 3. (2009), pp. 613-635. by Georg A. Gottwald, Marcel Oliver posted to teaching statistical_mechanics review mathematics by sobolevnrm on 2009-10-07 12:45:38 as
	Riemannian geometry in thermodynamic fluctuation theory [My Copy] Reviews of Modern Physics, Vol. 67, No. 3. (Jul 1995), pp. 605-659. by George Ruppeiner posted to thermodynamics tensor subsystems statistical_mechanics riemannian metric information_theory geometry free_energy fluctuations entropy curvature critical_point critical_exponents by tictacgo on 2009-09-30 06:19:47 as
	Information Theory and Statistical Mechanics [My Copy] Physical Review Online Archive (Prola), Vol. 106, No. 4. (15 May 1957), pp. 620-630. by E. T. Jaynes posted to statistical_mechanics statistical_inference partition_function information_theory by tictacgo on 2009-09-19 17:46:42 as along with 12 people thyk vtraag Gorzomagnificent gokopal GomezAddams christoph_study ddahlem nathanielvirgo hmk jenda_z varung dcoates
	Thermodynamics of Spacetime: The Einstein Equation of State [My Copy] (6 Jun 1995) by Ted Jacobson posted to thermodynamics statistical_mechanics second_law horizons general_relativity black_holes by tictacgo on 2009-09-17 02:31:18 as along with 3 people NitinCR janpaniev scis0000001
	Mechanism of attraction between like-charged particles in aqueous solution [My Copy] Soft Matter, Vol. 5, No. 20. (2009), pp. 3850-3857. by Ekaterina Nagornyak, Hyok Yoo, Gerald H. Pollack posted to statistical_mechanics electrostatics by sobolevnrm on 2009-09-01 12:43:54 as along with 1 person flbarroso
	Efficient Computation of Casimir Interactions between Arbitrary 3D Objects [My Copy] Physical Review Letters, Vol. 103, No. 4. (2009), 040401. by M. T. Homer Reid, Alejandro W. Rodriguez, Jacob White, Steven G. Johnson posted to statistical_mechanics electrostatics by sobolevnrm on 2009-09-01 12:43:43 as along with 1 person convulted
	Statistical mechanics of a Coulomb gas with finite size particles: A lattice field theory approach [My Copy] The Journal of Chemical Physics, Vol. 102, No. 11. (1995), pp. 4584-4594. by Rob D. Coalson, Alan M. Walsh, Anthony Duncan, Nir B. Tal posted to statistical_mechanics lattice coulomb by afenley on 2009-08-25 20:48:12 as along with 1 person and 1 group sobolevnrm baker-group
	The large deviation approach to statistical mechanics [My Copy] Physics Reports, Vol. 478, No. 1-3. (08 July 2009), pp. 1-69. by Hugo Touchette posted to statistical_mechanics physics large_deviations by jjray on 2009-08-25 19:47:52 as along with 2 people ansobol shangyung
	The multiscale coarse-graining method. III. A test of pairwise additivity of the coarse-grained potential and of new basis functions for the variational calculation [My Copy] The Journal of Chemical Physics, Vol. 131, No. 3. (2009), 034102. by Avisek Das, Hans C. Andersen posted to statistical_mechanics solvation nonpolar multiscale by sobolevnrm on 2009-08-19 12:55:48 as along with 3 people tomweingarten dlimmer agrossfield
	The probability of an encounter of two Brownian particles before escape [My Copy] Journal of Physics A: Mathematical and Theoretical, Vol. 42, No. 31. (2009), 315210. by D. Holcman, I. Kupka posted to statistical_mechanics mathematics kinetics diffusion by sobolevnrm on 2009-08-19 12:54:57 as
	Theory of Free Energy and Entropy in Noncovalent Binding [My Copy] Chemical Reviews, Vol. 109, No. 9. (9 September 2009), pp. 4092-4107. by Huan-Xiang Zhou, Michael K. Gilson posted to free_energy protein-ligand_interactions review statistical_mechanics by sobolevnrm on 2009-08-10 13:02:10 as along with 7 people and 2 groups jmccammon cchang agrossfield anuragsethi dr_proton qshao paulschlesinger McCammon Chang group
	The multiscale coarse-graining method. IV. Transferring coarse-grained potentials between temperatures [My Copy] The Journal of Chemical Physics, Vol. 131, No. 2. (2009), 024103. by Vinod Krishna, Will G. Noid, Gregory A. Voth posted to mathematics multiscale statistical_mechanics by sobolevnrm on 2009-08-10 13:01:50 as along with 2 people tomweingarten agrossfield
	An Introduction to Thermodynamics and Statistical Mechanics [My Copy] (11 June 2007) by Keith Stowe posted to statistical_mechanics thermodynamics by NitinCR on 2009-08-02 13:24:44 as
	Transcriptional regulation by the numbers: applications [My Copy] Current Opinion in Genetics & Development, Vol. 15, No. 2. (April 2005), pp. 125-135. by L. Bintu, N. Buchler, H. Garcia, et al.U. Gerland, T. Hwa, J. Kondev, T. Kuhlman, R. Phillips posted to gene_regulation mathematical_model promoter review shea-ackers statistical_mechanics thermodynamics by jjray on 2009-07-14 17:02:31 as along with 6 people and 1 group siebert imouthesmp dpollard madhadron dquest discreteonyxorb EisenLab
	Transcriptional regulation by the numbers: models [My Copy] Current Opinion in Genetics & Development, Vol. 15, No. 2. (April 2005), pp. 116-124. by L. Bintu, N. Buchler, H. Garcia, et al.U. Gerland, T. Hwa, J. Kondev, R. Phillips posted to gene_regulation mathematical_model promoter review shea-ackers statistical_mechanics thermodynamics by jjray on 2009-07-14 16:53:46 as along with 5 people siebert imouthesmp madhadron dquest discreteonyxorb
	Quantitative model for gene regulation by lambda phage repressor [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 79, No. 4. (February 1982), pp. 1129-1133. by G. K. Ackers, A. D. Johnson, M. A. Shea posted to gene_regulation mathematical_model promoter shea-ackers statistical_mechanics thermodynamics by jjray on 2009-07-14 16:52:13 as along with 1 person emptyhb
	Fundamental Dynamic Units: Feedforward Networks and Adjustable Gates [My Copy] (12 Jul 2009) by Herbert Sauro, Song Yang posted to feedforward gene_regulation mathematical_model promoter shea-ackers statistical_mechanics thermodynamics by jjray on 2009-07-14 16:49:11 as
	Fluctuation relations for a classical harmonic oscillator in an electromagnetic field [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 6. (2009), 061109. by Jiménez I. J. Aquino, R. M. Velasco, F. J. Uribe posted to electrostatics statistical_mechanics by sobolevnrm on 2009-07-02 12:58:48 as
	Monte Carlo methods in statistical physics: Mathematical foundations and strategies [My Copy] (4 Jun 2009) by Michael Kastner posted to monte_carlo_methods statistical_mechanics surveys teaching by shivak on 2009-07-02 01:22:31 as along with 8 people tomokonno acrmartins pdlug joshneil qwermish marinari scratchmandoo deanmalmgren
	Prediction, Retrodiction, and The Amount of Information Stored in the Present [My Copy] (22 May 2009) by Christopher J. Ellison, John R. Mahoney, James P. Crutchfield posted to information_theory modeling prediction statistical_mechanics by shivak on 2009-07-02 00:56:33 as
	Noise-Induced Breakdown of the Michaelis-Menten Equation in Steady-State Conditions [My Copy] Physical Review Letters, Vol. 102, No. 21. (2009), 218103. by R. Grima posted to kinetics statistical_mechanics by sobolevnrm on 2009-06-18 13:44:13 as along with 5 people ajitkumar22 apocapoc paulschlesinger cmetzner jjray
	Numerical studies of nonlocal electrostatic effects on the sub-nanoscale [My Copy] Journal of Physics: Condensed Matter, Vol. 21, No. 25. (2009), 255901. by Jorg Rottler, B. Krayenhoff posted to electrostatics solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-06-08 12:38:51 as along with 2 people Scis0000002 flbarroso
	Energy landscapes and their relation to thermodynamic phase transitions [My Copy] J. Stat. Mech., Vol. 2009, No. 02. (February 2009), P02016. by Michael Kastner posted to energy_landscapes statistical_mechanics by apocapoc on 2009-06-06 14:21:53 as
	Statistical mechanics of convergent evolution in spatial patterning [My Copy] Proceedings of the National Academy of Sciences (2 June 2009) by Bhavin S. Khatri, Tom C. Mcleish, Richard P. Sear posted to convergent_evolution development evolution gene_regulation spatial statistical_mechanics by jjray on 2009-06-03 17:19:17 as along with 3 people adampah JustinCrocker kshundyak
	Computing Best Transition Pathways in High-Dimensional Dynamical Systems: Application to the Alpha[sub L] ≤ftrightharpoons Beta ≤ftrightharpoons Alpha[sub R] Transitions in Octaalanine [My Copy] Multiscale Modeling & Simulation, Vol. 5, No. 2. (2006), pp. 393-419. by Frank Noé, Marcus Oswald, Gerhard Reinelt, Stefan Fischer, Jeremy C. Smith posted to hexapeptide markov statistical_mechanics stochastic_processes transition_path by Diego_Prada on 2009-05-29 19:05:53 as
	Progress in the Perturbation Approach in Fluid and Fluid-Related Theories [My Copy] Chemical Reviews, Vol. 0, No. 0. (0000) by Shiqi Zhou, J. R. Solana posted to review solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-29 12:18:04 as along with 1 person paulschlesinger
	Excess Grand Potential for a System under an External Field: Effects of External Field Driven Nonextensivity [My Copy] The Journal of Physical Chemistry B, Vol. 0, No. 0. (0000) by Yu R. Lim, Won Jung, Je H. Bae, Bo J. Park, Joonkyung Jang, Jaeyoung Sung posted to electrostatics statistical_mechanics by sobolevnrm on 2009-05-29 12:16:24 as
	Fluctuation Theorems [My Copy] Annual Review of Physical Chemistry, Vol. 59, No. 1. (2008), pp. 603-633. by E. M. Sevick, R. Prabhakar, Stephen R. Williams, Debra J. Searles posted to review statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-28 12:31:49 as
	Measuring Thermodynamic Length [My Copy] Physical Review Letters, Vol. 99, No. 10. (2007), 100602. by Gavin E. Crooks posted to free_energy statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-15 12:46:43 as along with 1 person tictacgo
	On the time taken by random walks on finite groups to visit every state [My Copy] Probability Theory and Related Fields, Vol. 62, No. 3. (1 September 1983), pp. 361-374. by David J. Aldous posted to diffusion kinetics statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-13 12:11:50 as
	Anisotropies in thermal Casimir interactions: Ellipsoidal colloids trapped at a fluid interface [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 5. (2009), 051401. by Ehsan Noruzifar, Martin Oettel posted to beyond_mean_field interfaces statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-11 12:26:52 as along with 1 person paulschlesinger
	Molecular dynamics simulations of strongly coupled plasmas [My Copy] Journal of Physics A: Mathematical and Theoretical, Vol. 42, No. 21. (2009), 214029. by Z. Donko posted to beyond_mean_field electrostatics molecular_dynamics statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-08 12:27:32 as
	Simple field theoretical approach of Coulomb systems. Entropic effects [My Copy] Journal of Physics A: Mathematical and Theoretical, Vol. 42, No. 21. (2009), 214038. by Di D. Caprio, J. P. Badiali, M. Holovko posted to beyond_mean_field electrostatics statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-08 12:27:10 as
	Microscopic structure and thermodynamics of a core-softened model fluid: Insights from grand canonical Monte Carlo simulations and integral equations theory [My Copy] The Journal of Chemical Physics, Vol. 130, No. 17. (2009), 174504. by Orest Pizio, Hector Dominguez, Yurko Duda, Stefan S. Owski posted to integral_equation solvation statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-07 12:59:43 as
	Correlation effects, image charge effects and finite size in the macro-ion-electrolyte system: A field-theoretic approach [My Copy] The European Physical Journal E: Soft Matter and Biological Physics, Vol. 28, No. 4. (1 April 2009), pp. 419-440. by D. Lee posted to beyond_mean_field electrostatics statistical_mechanics by sobolevnrm to the group baker-group on 2009-05-07 12:58:56 as

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electrostatics	172
solvation	138
beyond_mean_field	78
kinetics	42
diffusion	35
interfaces	27
text_book	26
biomembranes	25
integral_equation	25
mathematics	21
review	20
thermodynamics	19
molecular_simulation	15
nonpolar	14
experimental_methodology	12
stochastic_processes	9
stochastics	9
gene_regulation	8
master_equation	8
molecular_dynamics	8
nucleic_acids	8
entropy	7
free_energy	7
protein-ligand_interactions	7
fokker-planck_equation	6
folding	6
information_theory	6
lattice	6
mechanics	6
multiscale	6
physics	6
teaching	6
mathematical_model	5
phase_transitions	5
markov	4
md_history	4
pka	4
promoter	4
quantum_foundations	4
shea-ackers	4
topology	4
wigner_functions	4
brownian_motion	3
cavagna	3
chapt_cmn	3
contact	3
dynamics	3
evolution	3
free-energy	3
langevin	3
large_deviations	3
md	3
methods	3
moyal_bracket	3
non-equilibrium	3
plos	3
protein_folding	3
quantum_mechanics	3
quasi-probability	3
rna_pol_ii	3
thermodynamic_model	3
transcription	3
transcription_factors	3
transcription_regulation	3
2005	2
2007	2
biophysics	2
clustering	2
coarsening	2
colloids	2
continuous_phase_space	2
coulomb	2
cytoskeleton	2
detailed_balance	2
enhanced_sampling	2
geometry	2
hexapeptide	2
implicit_solvent	2
ligand-membrane_interactions	2
nanotech	2
nash_certainty_equivalence	2
non-equilibrium_statistics	2
nonequilibrium_steady_state	2
out_of_equilibrium	2
perfluorocarbons	2
programming	2
protein-protein_interactions	2
quasiharmonic-models_elastic-network_gnm_nma_pca_etc	2
quasiharmonic_models	2
stochastic_control_large_population_systems	2
surface_tension	2
ultrasound	2
visualization	2
development	1
life_origin	1
nonequilibrium_theory	1
path_integrals	1
threshold_signal	1
timescale	1
transition_path	1

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