Tag stoichiometry [43 articles] Export Sort

Recent papers classified by the tag stoichiometry.

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	The convex basis of the left null space of the stoichiometric matrix leads to the definition of metabolically meaningful pools. [My Copy] Biophysical journal, Vol. 85, No. 1. (July 2003), pp. 16-26. by Iman Famili, Bernhard O. Palsson posted to stoichiometry null_space by schwartzjmc on 2009-12-02 17:00:46 as
	Stoichiometry of Kir channels with phosphatidylinositol bisphosphate. [My Copy] Channels (Austin, Tex.), Vol. 2, No. 1. (b 2008), pp. 19-33. by Taihao Jin, Jin Liang L. Sui, Avia Rosenhouse-Dantsker, Kim W. Chan, Lily Y. Jan, Diomedes E. Logothetis posted to stoichiometry pip2 kir34 kir21 by dimka on 2009-11-17 07:48:34 as
	Potassium induced phase transition of FePc thin films [My Copy] The Journal of Chemical Physics, Vol. 128, No. 19. (2008), 194711. by F. Roth, A. König, R. Kraus, M. Knupfer posted to stoichiometry fepc doping by garjey on 2009-09-08 12:02:35 as
	Thermodynamics-Based Metabolic Flux Analysis [My Copy] Biophysical Journal, Vol. 92, No. 5. (01 March 2007), pp. 1792-1805. by C. Henry, L. Broadbelt, V. Hatzimanikatis posted to thermodynamic systems_biology stoichiometry flux fba by winterstream on 2009-08-24 13:26:40 as along with 5 people schwartzjmc vpenelle BjornJohansson lylu JeremyZucker
	Genome-scale thermodynamic analysis of Escherichia coli metabolism. [My Copy] Biophysical journal, Vol. 90, No. 4. (15 February 2006), pp. 1453-1461. by Christopher S. Henry, Matthew D. Jankowski, Linda J. Broadbelt, Vassily Hatzimanikatis posted to thermodynamic stoichiometry flux fba e_coli by winterstream on 2009-08-24 13:19:36 as along with 4 people schwartzjmc csanford lylu JeremyZucker
	A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information. [My Copy] Molecular systems biology, Vol. 3 (26 June 2007) by Adam M. Feist, Christopher S. Henry, Jennifer L. Reed, et al.Markus Krummenacker, Andrew R. Joyce, Peter D. Karp, Linda J. Broadbelt, Vassily Hatzimanikatis, Bernhard Ø. Palsson posted to thermodynamic stoichiometry in_silico flux fba e_coli by winterstream on 2009-08-24 13:18:08 as along with 7 people aheilbut schwartzjmc alexg cjeans hryk michaelbarton JeremyZucker
	Variable stoichiometry of the TatA component of the twin-arginine protein transport system observed by in vivo single-molecule imaging [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 40. (7 October 2008), pp. 15376-15381. by Mark C. Leake, Nicholas P. Greene, Rachel M. Godun, et al.Thierry Granjon, Grant Buchanan, Shuyun Chen, Richard M. Berry, Tracy Palmer, Ben C. Berks posted to transport tat stoichiometry stepwise single protein photobleaching molecule by gabe_rosser on 2009-08-18 16:26:39 as along with 2 people OliverHarriman ARobson
	Variable Stoichiometry of Phosphate-Linked Anion Exchange in Streptococcus lactis: Implications for the Mechanism of Sugar Phosphate Transport by Bacteria [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 83, No. 2. (1986), pp. 280-284. by Suresh V. Ambudkar, Larry A. Sonna, Peter C. Maloney posted to stoichiometry uhpt by girayenkavi on 2009-08-06 23:58:29 as
	Variable stoichiometry in active ion transport: theoretical analysis of physiological consequences [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 82, No. 16. (August 1985), pp. 5352-5356. by E. A. Johnson, C. Tanford, J. A. Reynolds posted to ion stoichiometry transport variable by girayenkavi on 2009-08-06 23:09:20 as
	Dynamic Flux Balance Analysis of Diauxic Growth in Escherichia coli [My Copy] Biophysical Journal, Vol. 83, No. 3. (September 2002), pp. 1331-1340. by R. Mahadevan, J. Edwards, F. Doyleiii posted to balance dynamics e_coli fba flux growth in_silico network networks stoichiometry by winterstream on 2009-07-28 15:13:54 as along with 1 person yujiangwang
	Advances in flux balance analysis. [My Copy] Curr Opin Biotechnol, Vol. 14, No. 5. (October 2003), pp. 491-496. by K. J. Kauffman, P. Prakash, J. S. Edwards posted to balance fba flux metabolic modelling network networks review stoichiometry by winterstream on 2009-07-24 11:50:12 as along with 5 people and 5 groups beapen wnpx nirfriedman bsmagic edwardmorrissey Bioinformatics Atopic_and_Seborrhoeic_Dermatitis Skin_Deep Applied_Bimatics bioinplant
	Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. [My Copy] Appl. Environ. Microbiol., Vol. 60, No. 10. (1 October 1994), pp. 3724-3731. by A. Varma, B. O. Palsson posted to e_coli fba flux growth metabolic stoichiometry by winterstream on 2009-07-20 11:07:47 as along with 3 people stharward JeremyZucker madhadron
	Oligomeric Structure of Colicin Ia Channel in Lipid Bilayer Membranes [My Copy] J. Biol. Chem., Vol. 284, No. 24. (12 June 2009), pp. 16126-16134. by Sarah L. Greig, Mazdak Radjainia, Alok K. Mitra posted to 1a bilayer channel colicin greig09pdf lipid membranes stoichiometry by paulschlesinger on 2009-06-09 00:41:12 as
	The Stoichiometry of Antibody-Mediated Neutralization and Enhancement of West Nile Virus Infection [My Copy] Cell Host & Microbe, Vol. 1, No. 2. (19 April 2007), pp. 135-145. by T. Pierson, Q. Xu, S. Nelson, et al.T. Oliphant, G. Nybakken, D. Fremont, M. Diamond posted to stoichiometry wnv by feltesm on 2009-06-04 20:09:28 as
	Temperature and the Chemical Composition of Poikilothermic Organisms [My Copy] Functional Ecology, Vol. 17, No. 2. (2003), pp. 237-245. by H. A. Woods, W. Makino, J. B. Cotner, et al.S. E. Hobbie, J. F. Harrison, K. Acharya, J. J. Elser posted to composition paper_1 stoichiometry temperature by anphony to the group Savage Lab, UCLA on 2009-06-01 23:55:51 as
	On the role of conserved moieties in shaping the robustness and production capabilities of reaction networks [My Copy] (29 Oct 2008) by Andrea De Martino, Carlotta Martelli, Francesco A. Massucci posted to biophysics cellular_metabolism growth reaction_network stoichiometry by marinari on 2009-06-01 12:44:21 as
	Identifying essential genes in Escherichia coli from a metabolic optimization principle. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (5 February 2009) by Carlotta Martelli, Andrea De Martino, Enzo Marinari, Matteo Marsili, Isaac Pérez P. Castillo posted to bacterium biophysics cellular_metabolism escherichia_coli essential_gene frozen_flux mass_balance optimization stoichiometry by marinari on 2009-06-01 12:27:37 as along with 3 people lflorez trfield michaelbarton
	Elucidation and structural analysis of conserved pools for genome-scale metabolic reconstructions. [My Copy] Biophysical journal, Vol. 88, No. 1. (January 2005), pp. 37-49. by E. V. Nikolaev, A. P. Burgard, C. D. Maranas posted to metabolic_reconstruction stoichiometry by schwartzjmc on 2009-05-24 18:11:44 as
	Detection of stoichiometric inconsistencies in biomolecular models. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 19. (1 October 2008), pp. 2245-2251. by A. Gevorgyan, M. G. Poolman, D. A. Fell posted to metabolic_reconstruction stoichiometry by schwartzjmc on 2009-05-24 18:05:41 as
	Ecological Nitrogen Limitation Shapes the DNA Composition of Plant Genomes [My Copy] Molecular Biology and Evolution, Vol. 26, No. 5., pp. 953-956. by Claudia Acquisti, James J. Elser, Sudhir Kumar posted to composition dna evolution genome stoichiometry by robfsouza on 2009-05-18 19:27:22 as along with 2 people and 1 group GustavoLacerda stajich Mycology
	Site disorder in Co[sub 2]Fe(Al,Si) Heusler alloys and its influence on junction tunnel magnetoresistance [My Copy] Physical Review B (Condensed Matter and Materials Physics), Vol. 77, No. 21. (2008), 214425. by K. Inomata, M. Wojcik, E. Jedryka, N. Ikeda, N. Tezuka posted to heusler nmr stoichiometry by kken on 2009-05-01 01:47:01 as
	Off-stoichiometry in Co2FeSi thin films sputtered from stoichiometric targets revealed by nuclear magnetic resonance [My Copy] Journal of Physics D: Applied Physics, Vol. 42, No. 8. (2009), 084017. by Sabine Wurmehl, Jurgen T. Kohlhepp, Henk J. Swagten, et al.Bert Koopmans, Christian G. Blum, Vadim Ksenofontov, Horst Schneider, Gerhard Jakob, Daniel Ebke, Gunter Reiss posted to heusler nmr stoichiometry by kken on 2009-05-01 01:34:44 as
	Nutritional constraints in terrestrial and freshwater food webs [My Copy] Nature, Vol. 408 (November 2000), pp. 578-580. by J. J. Elser, W. F. Fagan, R. F. Denno, et al.D. R. Dobberfuhl, A. Folarin, A. Huberty, S. Interlandi, S. S. Kilham, E. Mccauley, K. L. Schulz, E. H. Siemann, R. W. Sterner posted to aquatic_vs_terrestrial food_web stoichiometry by anphony on 2009-02-06 08:51:28 as
	Inhibition of cyclin-dependent kinases by p21 [My Copy] Mol. Biol. Cell, Vol. 6, No. 4. (1 April 1995), pp. 387-400. by J. W. Harper, S. J. Elledge, K. Keyomarsi, et al.B. Dynlacht, L. H. Tsai, P. Zhang, S. Dobrowolski, C. Bai, L. Connell-Crowley, E. Swindell posted to cdk cdki inhibition p21 p27 stoichiometry by catcremona on 2009-01-27 00:06:31 as
	Interactions of the M. tuberculosis UsfX with the cognate sigma factor SigF and the anti-anti sigma factor RsfA. [My Copy] Biochimica et biophysica acta (27 November 2008) by Shuja Shafi S. Malik, Amit Luthra, Ravishankar Ramachandran posted to mycobacterium_tuberculosis sigma_factor stoichiometry by jjray on 2009-01-11 20:52:45 as
	A critical examination of stoichiometric and path-finding approaches to metabolic pathways [My Copy] Brief Bioinform (24 April 2008), bbn018. by Francisco J. Planes, John E. Beasley posted to graph metabolic miranda stoichiometry pathway by ptrobajo on 2008-10-08 23:25:50 as along with 5 people pablocarb lflorez guhjy renatomilani shung
	Blue native PAGE. [My Copy] Nature protocols, Vol. 1, No. 1. (2006), pp. 418-428. by I. Wittig, H. P. Braun, H. Schägger posted to complexes interactions methods preparation purification separation stoichiometry by faion on 2008-06-30 09:05:18 as along with 2 people and 1 group guhjy stevanspringer FAB-lab
	Cellular Stoichiometry of the Components of the Chemotaxis Signaling Complex [My Copy] J. Bacteriol., Vol. 186, No. 12. (15 June 2004), pp. 3687-3694. by Mingshan Li, Gerald L. Hazelbauer posted to chemotaxis signal stoichiometry by RebeccaHamer on 2008-05-28 10:02:02 as along with 1 person vladimirov
	Differential localization of coatomer complex isoforms within the Golgi apparatus. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 11. (13 March 2007), pp. 4425-4430. by J. Moelleken, J. Malsam, M. J. Betts, et al.A. Movafeghi, I. Reckmann, I. Meissner, A. Hellwig, R. B. Russell, T. Söllner, B. Brügger, F. T. Wieland posted to coatomer complexes copi interactions isotypes membrane regulation stoichiometry traffic vesicle by faion on 2008-05-17 13:46:17 as
	Surface Stoichiometry of CdSe Nanocrystals Determined by Rutherford Backscattering Spectroscopy [My Copy] Journal of Cluster Science, Vol. 12, No. 4. (1 December 2001), pp. 571-582. by Jason Taylor, Tadd Kippeny, Sandra J. Rosenthal posted to cdse nanoparticle stoichiometry surface topo by jkindt on 2008-05-15 21:02:18 as along with 1 person and 1 group awest_y Nanoparticles
	Subunit architecture of multimeric complexes isolated directly from cells [My Copy] EMBO Reports, Vol. aop, No. current. (18 August 2006) by Helena Hernandez, Andrzej Dziembowski, Thomas Taverner, Bertrand Seraphin, Carol V. Robinson posted to complexes interactions ms stoichiometry topology by faion on 2008-04-20 12:08:38 as along with 1 person chad_davis
	Structural organization of the 19S proteasome lid: insights from MS of intact complexes. [My Copy] PLoS Biol, Vol. 4, No. 8. (August 2006) by M. Sharon, T. Taverner, X. I. Ambroggio, R. J. Deshaies, C. V. Robinson posted to complexes interactions ms stoichiometry topology by faion on 2008-04-20 12:07:58 as along with 2 people cerca zhlei
	Determination of the stoichiometry of protein complexes using liquid chromatography with fluorescence and mass spectrometric detection of fluorescently labeled proteolytic peptides. [My Copy] Proteomics, Vol. 4, No. 3. (March 2004), pp. 669-676. by E. O. Hochleitner, P. Sondermann, F. Lottspeich posted to complexes fluo ms stoichiometry by faion on 2008-04-20 11:08:39 as
	Subunit Architecture of Intact Protein Complexes from Mass Spectrometry and Homology Modeling [My Copy] Acc. Chem. Res. (4 March 2008) by Thomas Taverner, Hern&#xe1, Helena Ndez, et al.Michal Sharon, Brandon T. Ruotolo, Matak-Vinkovic&#x301, Dijana, Damien Devos, Robert B. Russell, Carol V. Robinson posted to complexes interactions ms separation stoichiometry topology by faion on 2008-04-19 15:55:26 as along with 1 person chad_davis
	How to analyze protein complexes by 2D blue native SDS-PAGE. [My Copy] Proteomics, Vol. 7 Suppl 1 (September 2007), pp. 6-16. by V. Reisinger, L. A. Eichacker posted to complexes quantitative separation stoichiometry by faion on 2008-04-19 15:50:10 as along with 1 person guhjy
	Tetrameric Stoichiometry of a Prokaryotic K+ Channel [My Copy] Biochemistry, Vol. 36, No. 33. (19 August 1997), pp. 10335-10342. by L. Heginbotham, E. Odessey, C. Miller posted to 08 kcsa oligomeric_stability stoichiometry by jenni_p on 2008-02-29 11:32:32 as
	The structure of the potassium channel: molecular basis of K+ conduction and selectivity. [My Copy] Science, Vol. 280, No. 5360. (3 April 1998), pp. 69-77. by D. A. Doyle, J. Morais Cabral, R. A. Pfuetzner, et al.A. Kuo, J. M. Gulbis, S. L. Cohen, B. T. Chait, R. MacKinnon posted to 02 cavity crystal_structure kcsa permeation selectivity sf stoichiometry by jenni_p on 2008-02-28 18:22:31 as along with 5 people and 1 group Copper_Calcio brocktice davidcsterratt jvf lenov TulaneCEP
	Carbon and nitrogen stoichiometry and nitrogen cycling rates in streams [My Copy] Oecologia, Vol. 140, No. 3. (2004), pp. 458-467. by Walter K. Dodds, Eugenia Martí, Jennifer L. Tank, et al.Jeffrey Pontius, Stephen K. Hamilton, Nancy B. Grimm, William B. Bowden, William H. Mcdowell, Bruce J. Peterson, Maurice H. Valett, Jackson R. Webster, Stan Gregory posted to carbon nitrogen stoichiometry streams by emayorga on 2008-02-01 18:10:12 as
	Global analysis of nitrogen and phosphorus limitation of primary producers in freshwater, marine and terrestrial ecosystems [My Copy] Ecology Letters, Vol. 10, No. 12. (December 2007), pp. 1135-1142. by James J. Elser, Matthew E. Bracken, Elsa E. Cleland, et al.Daniel S. Gruner, Stanley W. Harpole, Helmut Hillebrand, Jacqueline T. Ngai, Eric W. Seabloom, Jonathan B. Shurin, Jennifer E. Smith posted to aquatic eutrophication intercomparison lakes marine nitrogen nutrient_limitation phosphorus productivity river stoichiometry by emayorga on 2007-11-22 03:04:21 as along with 1 person and 1 group andrewirwin Biological oceanography
	FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps. [My Copy] Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 261-269. by S. Klamt, J. Stelling, M. Ginkel, E. D. Gilles posted to sysbio stoichiometry by carmaus to the group dIEMoSIRIS on 2007-07-13 10:03:25 as along with 2 people and 1 group alexg balicea MoSi-Rostock
	Preassociation of calmodulin with voltage-gated Ca(2+) channels revealed by FRET in single living cells. [My Copy] Neuron, Vol. 31, No. 6. (27 September 2001), pp. 973-985. by M. G. Erickson, B. A. Alseikhan, B. Z. Peterson, D. T. Yue posted to algorithm fret stoichiometry by Fritz on 2006-07-27 11:16:09 as along with 1 person and 1 group dark_innocent neurolit
	Protein interaction quantified in vivo by spectrally resolved fluorescence resonance energy transfer. [My Copy] Biochem J, Vol. 385, No. Pt 1. (1 January 2005), pp. 265-277. by V. Raicu, D. B. Jansma, R. J. Miller, J. D. Friesen posted to fret gfp gpcr oligomerization photobleaching stoichiometry yfp by Fritz to the group neurolit on 2006-07-08 10:20:42 as along with 1 person tmt
	Measurement of FRET efficiency and ratio of donor to acceptor concentration in living cells. [My Copy] Biophysical journal, Vol. 91, No. 5. (1 September 2006) by Huanmian Chen, Henry L. Puhl, Srinagesh V. Koushik, Steven S. Vogel, Stephen R. Ikeda posted to cfp fret stoichiometry yfp by Fritz to the group neurolit on 2006-07-08 10:12:25 as along with 4 people coreyrountree dark_innocent haisent toerst

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