Tag structural_biology [49 articles] Export Sort

Recent papers classified by the tag structural_biology.

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	A New Method for Publishing Three-Dimensional Content [My Copy] In PLoS ONE, Vol. 4, No. 10. (20 October 2009), e7394. by Eugene Raush, Max Totrov, Brian D. Marsden, Ruben Abagyan posted to structural_biology semantic_enhancement by cisevol to the group BergmanLab on 2009-12-07 22:11:31 as
	Effect of low-complexity regions on protein structure determination. [My Copy] Journal of structural and functional genomics, Vol. 8, No. 4. (1 December 2007), pp. 217-226. by Ryan M. Bannen, Craig A. Bingman, George N. Phillips posted to structural_biology proteins bioinformatics by pekrau on 2009-12-02 11:51:18 as
	Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing. [My Copy] Biochemistry, Vol. 28, No. 18. (5 September 1989), pp. 7241-7257. by P. J. Kraulis, G. M. Clore, M. Nilges, et al.T. A. Jones, G. Pettersson, J. Knowles, A. M. Gronenborn posted to structural_biology proteins nmr_assignment by pekrau on 2009-11-30 21:22:09 as
	Structural determinants of protein folding. [My Copy] Cellular and molecular life sciences : CMLS, Vol. 66, No. 14. (1 July 2009), pp. 2341-2361. by Tse Siang S. Kang, R. Manjunatha Kini posted to structural_biology review protein-folding by skywalkerus02 on 2009-10-04 17:35:29 as along with 1 person saunders
	Open-source science to enable drug discovery [My Copy] Drug Discovery Today, Vol. 13, No. 17-18. (September 2008), pp. 731-733. by A. Edwards posted to structural_biology open_access drug_targets drug_discovery by pekrau on 2009-09-17 10:22:54 as along with 7 people agomez guhjy nicklynch hpiwowar dullhunk zimbo1 psique
	A workflow for mutation extraction and structure annotation. [My Copy] J Bioinform Comput Biol, Vol. 5, No. 6. (December 2007), pp. 1319-1337. by R. Kanagasabai, K. H. Choo, S. Ranganathan, C. J. Baker posted to structural_biology workflow proteins bioinformatics by pekrau on 2009-09-15 14:07:23 as along with 1 person dullhunk
	The structure of beta-lactoglobulin and its similarity to plasma retinol-binding protein. [My Copy] Nature, Vol. 324, No. 6095. (3 1986), pp. 383-385. by M. Z. Papiz, L. Sawyer, E. E. Eliopoulos, et al.A. C. North, J. B. Findlay, R. Sivaprasadarao, T. A. Jones, M. E. Newcomer, P. J. Kraulis posted to structural_biology proteins by pekrau on 2009-08-20 16:29:42 as
	Determination of three-dimensional protein structures from nuclear magnetic resonance data using fragments of known structures. [My Copy] Proteins, Vol. 2, No. 3. (1987), pp. 188-201. by P. J. Kraulis, T. A. Jones posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:29:13 as
	The solution conformation of the antibacterial peptide cecropin A: a nuclear magnetic resonance and dynamical simulated annealing study. [My Copy] Biochemistry, Vol. 27, No. 20. (4 October 1988), pp. 7620-7629. by T. A. Holak, A. Engström, P. J. Kraulis, et al.G. Lindeberg, H. Bennich, T. A. Jones, A. M. Gronenborn, G. M. Clore posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:27:25 as
	Similarity of protein G and ubiquitin. [My Copy] Science (New York, N.Y.), Vol. 254, No. 5031. (25 October 1991), pp. 581-582. by P. J. Kraulis posted to structural_biology proteins by pekrau on 2009-08-20 16:26:58 as
	Structure of the DNA-binding domain of zinc GAL4. [My Copy] Nature, Vol. 356, No. 6368. (2 April 1992), pp. 448-450. by P. J. Kraulis, A. R. Raine, P. L. Gadhavi, E. D. Laue posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:26:05 as
	Investigation of the function of mutated cellulose-binding domains of Trichoderma reesei cellobiohydrolase I. [My Copy] Proteins, Vol. 14, No. 4. (December 1992), pp. 475-482. by T. Reinikainen, L. Ruohonen, T. Nevanen, et al.L. Laaksonen, P. Kraulis, T. A. Jones, J. K. Knowles, T. T. Teeri posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:25:34 as
	Structure of the HMG box motif in the B-domain of HMG1. [My Copy] The EMBO journal, Vol. 12, No. 4. (April 1993), pp. 1311-1319. by H. M. Weir, P. J. Kraulis, C. S. Hill, A. R. Raine, E. D. Laue, J. O. Thomas posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:24:58 as
	Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and four-dimensional NMR spectroscopy. [My Copy] Biochemistry, Vol. 33, No. 12. (29 March 1994), pp. 3515-3531. by P. J. Kraulis, P. J. Domaille, S. L. Campbell-Burk, T. Van Aken, E. D. Laue posted to structural_biology proteins signalling nmr by pekrau on 2009-08-20 16:23:57 as
	Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach. [My Copy] Journal of molecular biology, Vol. 243, No. 4. (4 November 1994), pp. 696-718. by P. J. Kraulis posted to structural_biology nmr_assignment proteins software nmr by pekrau on 2009-08-20 16:23:15 as along with 1 person apaydin
	The serum albumin-binding domain of streptococcal protein G is a three-helical bundle: a heteronuclear NMR study. [My Copy] FEBS letters, Vol. 378, No. 2. (8 January 1996), pp. 190-194. by P. J. Kraulis, P. Jonasson, P. A. Nygren, et al.M. Uhlén, L. Jendeberg, B. Nilsson, J. Kördel posted to structural_biology proteins nmr by pekrau on 2009-08-20 16:22:23 as
	Ansig for Windows: an interactive computer program for semiautomatic assignment of protein NMR spectra. [My Copy] Journal of biomolecular NMR, Vol. 18, No. 4. (December 2000), pp. 329-336. by M. Helgstrand, P. Kraulis, P. Allard, T. Härd posted to structural_biology nmr_assignment proteins software nmr by pekrau on 2009-08-20 16:21:38 as
	APP binds DR6 to trigger axon pruning and neuron death via distinct caspases [My Copy] Nature, Vol. 457, No. 7232. (19 February 2009), pp. 981-989. by Anatoly Nikolaev, Todd Mclaughlin, Dennis D. O/'leary, Marc Tessier-Lavigne posted to biology experimental structural_biology by jerome on 2009-04-14 08:06:10 as along with 3 people fool_on_hill chiufanlee rwdaniels
	Genetic dissection of tyrosyl-tRNA synthetase. [My Copy] Biochemical Society transactions, Vol. 12, No. 2. (April 1984), pp. 224-225. by G. Winter, P. Carter, M. M. Waye, et al.D. M. Blow, A. J. Wilkinson, J. P. Shi, A. R. Fersht posted to mary_waye_publications protein structural_biology by marywaye on 2009-02-23 15:12:02 as
	Hydrogen bonding and biological specificity analysed by protein engineering. [My Copy] Nature, Vol. 314, No. 6008. (7 1985), pp. 235-238. by A. R. Fersht, J. P. Shi, J. Knill-Jones, et al.D. M. Lowe, A. J. Wilkinson, D. M. Blow, P. Brick, P. Carter, M. M. Waye, G. Winter posted to mary_waye_publications protein structural_biology technique by marywaye on 2009-02-23 15:11:21 as
	Engineering of tyrosyl tRNA synthetase. [My Copy] Biochimie, Vol. 67, No. 7-8. (g 1985), pp. 737-743. by H. Bedouelle, P. Carter, M. M. Waye, et al.G. Winter, D. M. Lowe, A. J. Wilkinson, A. R. Fersht posted to mary_waye_publications protein structural_biology technique by marywaye on 2009-02-23 15:10:06 as
	Characterization of nucleosome core particles containing histone proteins made in bacteria. [My Copy] Journal of molecular biology, Vol. 272, No. 3. (26 September 1997), pp. 301-311. by K. Luger, T. J. Rechsteiner, A. J. Flaus, M. M. Waye, T. J. Richmond posted to mary_waye_publications protein structural_biology by marywaye on 2009-02-23 14:50:07 as
	A Novel Mechanism of G Protein-coupled Receptor Functional Selectivity: MUSCARINIC PARTIAL AGONIST McN-A-343 AS A BITOPIC ORTHOSTERIC/ALLOSTERIC LIGAND [My Copy] J. Biol. Chem., Vol. 283, No. 43. (24 October 2008), pp. 29312-29321. by Celine Valant, Karen J. Gregory, Nathan E. Hall, et al.Peter J. Scammells, Michael J. Lew, Patrick M. Sexton, Arthur Christopoulos posted to gpcr structural_biology by jerome on 2009-02-16 11:33:39 as
	Structural diversity of G protein-coupled receptors and significance for drug discovery [My Copy] Nature Reviews Drug Discovery, Vol. 7, No. 4., pp. 339-357. by Malin C. Lagerström, Helgi B. Schiöth posted to gpcr review structural_biology by jerome on 2009-02-16 11:32:31 as along with 6 people leocmcheung yuslinaz guhjy nprcrzy fernan superpyrin
	Synthetic biology through biomolecular design and engineering [My Copy] Current Opinion in Structural Biology In Membranes / Engineering and design, Vol. 18, No. 4. (August 2008), pp. 491-498. by K. Channon, E. Bromley, D. Woolfson posted to review structural_biology synthetic_biology by Synthetic_Biology_Literature on 2009-01-09 10:57:57 as along with 4 people druvus kevinchannon patrickking fgibson
	High-resolution solution NMR structure of the Z domain of staphylococcal protein A [My Copy] Journal of Molecular Biology, Vol. 272, No. 4. (03 October 1997), pp. 573-590. by M. Tashiro posted to structural_biology x-ray by msuarezdiez on 2008-11-19 10:54:26 as
	BAX activation is initiated at a novel interaction site [My Copy] Nature, Vol. 455, No. 7216. (23 October 2008), pp. 1076-1081. by Evripidis Gavathiotis, Motoshi Suzuki, Marguerite L. Davis, et al.Kenneth Pitter, Gregory H. Bird, Samuel G. Katz, Ho-Chou Tu, Hyungjin Kim, Emily H. Y. Cheng, Nico Tjandra, Loren D. Walensky posted to apoptosis bax structural_biology by cmzmasek on 2008-11-03 23:24:12 as along with 3 people jmcgillen emiko paulschlesinger
	Structure, specificity, and mode of interaction for bacterial albumin-binding modules. [My Copy] The Journal of biological chemistry, Vol. 277, No. 10. (8 March 2002), pp. 8114-8120. by Maria U. Johansson, Inga-Maria M. Frick, Hanna Nilsson, et al.Per J. Kraulis, Sophia Hober, Per Jonasson, Martin Linhult, Per-Ake A. Nygren, Mathias Uhlén, Lars Björck, Torbjörn Drakenberg, Sture Forsén, Mats Wikström posted to structural_biology proteins nmr by pekrau on 2008-03-24 10:34:14 as
	SS3D-P2: a three-dimensional substructure search program for protein motifs based on secondary structure elements [My Copy] Comput. Appl. Biosci., Vol. 13, No. 6. (1 December 1997), pp. 593-600. by Hiroaki Kato, Yoshimasa Takahashi posted to motif structural_biology by shadowman on 2007-12-20 19:15:08 as
	Characterizing the microenvironment surrounding protein sites [My Copy] Protein Sci, Vol. 4, No. 4. (1 April 1995), pp. 622-635. by S. C. Bagley, R. B. Altman posted to motif structural_biology by shadowman on 2007-12-19 03:33:21 as along with 1 person xwang14
	Recognizing complex, asymmetric functional sites in protein structures using a Bayesian scoring function. [My Copy] J Bioinform Comput Biol, Vol. 1, No. 1. (April 2003), pp. 119-138. by L. Wei, R. B. Altman posted to motif structural_biology by shadowman on 2007-12-19 03:29:46 as
	Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks [My Copy] Proteins: Structure, Function, and Genetics, Vol. 41, No. 3. (2000), pp. 271-287. by A. G. de Brevern, C. Etchebest, S. Hazout posted to motif structural_biology by shadowman on 2007-12-17 20:51:26 as
	A Graph-theoretic Approach to the Identification of Three-dimensional Patterns of Amino Acid Side-chains in Protein Structures [My Copy] Journal of Molecular Biology, Vol. 243, No. 2. (20 October 1994), pp. 327-344. by Peter J. Artymiuk, Andrew R. Poirrette, Helen M. Grindley, David W. Rice, Peter Willett posted to motif structural_biology by shadowman on 2007-12-17 18:27:08 as
	Three-dimensional, sequence order-independent structural comparison of a serine protease against the crystallographic database reveals active site similarities: potential implications to evolution and to protein folding. [My Copy] Protein Sci, Vol. 3, No. 5. (May 1994), pp. 769-778. by D. Fischer, H. Wolfson, S. L. Lin, R. Nussinov posted to geometric_hashing structural_biology by shadowman on 2007-12-17 16:44:24 as along with 4 people and 2 groups barry aalibes tjimenez chrys structural_bioinformatics Bioinformatics
	Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution [My Copy] Journal of Molecular Biology, Vol. 279, No. 5. (26 June 1998), pp. 1211-1227. by Robert B. Russell posted to motif structural_biology by shadowman on 2007-12-16 19:05:05 as along with 2 people jwm Evangelia
	Recognition of spatial motifs in protein structures. [My Copy] Journal of molecular biology, Vol. 285, No. 4. (29 January 1999), pp. 1887-1897. by G. J. Kleywegt posted to motif structural_biology by shadowman on 2007-12-16 18:52:20 as along with 3 people jwm nickolay martainn
	An Approach to Three-Dimensional Motif Finding in Proteins [My Copy] by Hiroaki Kato, Yoshimasa Takahashi posted to distance_matrix motif structural_biology by shadowman on 2007-12-10 01:12:35 as
	Characterizing oriented protein structural sites using biochemical properties [My Copy] (1995) by S. Bagley, L. Wei, C. Cheng, R. Altman posted to feature motif structural_biology by shadowman on 2007-12-09 20:29:20 as
	TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites. [My Copy] Protein Sci, Vol. 6, No. 11. (November 1997), pp. 2308-2323. by A. C. Wallace, N. Borkakoti, J. M. Thornton posted to geometric_hashing motif structural_biology by shadowman on 2007-12-07 21:52:42 as along with 3 people tjimenez jwm nickolay
	A geometric algorithm to find small but highly similar 3D substructures in proteins [My Copy] Bioinformatics, Vol. 14, No. 6. (1 July 1998), pp. 516-522. by X. Pennec, N. Ayache posted to geometric_hashing motif structural_biology by shadowman on 2007-12-07 21:51:53 as
	Clustering protein environments for function prediction: finding PROSITE motifs in 3D [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 4. (2007), S10. by Sungroh Yoon, Jessica Ebert, Eui Y. Chung, Giovanni De Micheli, Russ Altman posted to clustering feature motif structural_biology by shadowman on 2007-11-30 03:19:18 as along with 3 people and 1 group HawkinsJohnC iaolier Einat structural_bioinformatics
	Automatic generation of 3D motifs for classification of protein binding sites [My Copy] BMC Bioinformatics, Vol. 8 (30 August 2007), 321. by Jean-Christophe Nebel, Pawel Herzyk, David R. Gilbert posted to clustering motif structural_biology by shadowman on 2007-11-30 02:52:07 as along with 4 people iaolier carlescorbi Evangelia Minty
	Discovering structural motifs using a structural alphabet: Application to magnesium-binding sites [My Copy] BMC Bioinformatics, Vol. 8 (28 March 2007), 106. by Minko Dudev, Carmay Lim posted to frequency_analysis motif structural_biology by shadowman on 2007-11-30 02:33:05 as along with 1 person svozil
	Automated construction of structural motifs for predicting functional sites on protein structures. [My Copy] Pac Symp Biocomput (2003), pp. 204-215. by M. P. Liang, D. L. Brutlag, R. B. Altman posted to feature motif structural_biology by shadowman on 2007-11-26 18:22:50 as along with 1 person Ema
	FoldMiner: structural motif discovery using an improved superposition algorithm. [My Copy] Protein Sci, Vol. 13, No. 1. (January 2004), pp. 278-294. by J. Shapiro, D. Brutlag posted to geometric_hashing motif structural_biology by shadowman on 2007-11-26 18:19:51 as
	An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis. [My Copy] Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1644-1649. by J. A. Barker, J. M. Thornton posted to geometric_hashing motif structural_biology by shadowman on 2007-11-26 17:51:10 as along with 6 people and 2 groups tjimenez jwm gbart tny siebertm chgjb Radiation_Damage Stressosome
	Protein function prediction using local 3D templates. [My Copy] J Mol Biol (11 July 2005) by R. A. Laskowski, J. D. Watson, J. M. Thornton posted to function_from_structure motif structural_biology by shadowman on 2007-11-26 17:04:14 as along with 7 people mdimmic chrn gbart MaggieYe siebertm yoonk jwm
	Analysis of domain motions in large proteins [My Copy] Proteins: Structure, Function, and Genetics, Vol. 34, No. 3., pp. 369-382. by Konrad Hinsen, Aline Thomas, Martin J. Field posted to domain motif structural_biology by shadowman on 2007-11-26 16:53:33 as along with 3 people and 3 groups ubcg08l barry yongzhao structural_bioinformatics Bioinformatics TSRI_MGL
	Analysis of domain motions by approximate normal mode calculations [My Copy] Proteins: Structure, Function, and Genetics, Vol. 33, No. 3. (9 March 1999), pp. 417-429. by Konrad Hinsen posted to domain motif structural_biology by shadowman on 2007-11-26 16:50:16 as along with 5 people and 3 groups abovell BragilMassoud barry aqeel yongzhao structural_bioinformatics Bioinformatics TSRI_MGL

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