Tag textmining [at least 200 articles] Export

Recent papers classified by the tag textmining.

	An architecture for biological information extraction and representation. [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 430-438. by A. Vailaya, P. Bluvas, R. Kincaid, A. Kuchinsky, M. Creech, A. Adler posted to textmining literature information_discovery hypothesisgeneration by lh49 on 2009-11-27 16:50:40 as along with 4 people and 2 groups snuppepuppan irenas yas samal dbk-lab T_lab
	An architecture for biological information extraction and representation [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 430-438. by Aditya Vailaya, Peter Bluvas, Robert Kincaid, Allan Kuchinsky, Michael Creech, Annette Adler posted to textmining literature knowledge hypothesisgeneration by lh49 on 2009-11-27 16:00:56 as along with 7 people and 1 group Keywan irenas eweaver kt t11 kemo thomaskelder dbk-lab
	Spatially Uniform ReliefF (SURF) for computationally-efficient filtering of gene-gene interactions [My Copy] BioData Mining, Vol. 2, No. 1. (2009), 5. by Casey Greene, Nadia Penrod, Jeff Kiralis, Jason Moore posted to textmining ppi literaturemining gene-gene by liblab on 2009-10-14 08:34:46 as
	Open Information Extraction from the Web [My Copy] In Proceedings of the 20th International Joint Conference on Artificial Intelligence (2007), pp. 2670-2676. by Michele Banko, Michael J. Cafarella, Stephen Soderland, Matthew Broadhead, Oren Etzioni edited by Manuela M. Veloso posted to textmining it datamining by klauso on 2009-10-01 12:04:52 as along with 5 people ianturton ttylenda hehrig lillejul kgajos
	Building disease-specific drug-protein connectivity maps from molecular interaction networks and PubMed abstracts. [My Copy] PLoS computational biology, Vol. 5, No. 7. (31 July 2009), e1000450. by Jiao Li, Xiaoyan Zhu, Jake Yue Y. Chen posted to textmining interaction drugs by adamjamesreid to the group Journal picks on 2009-08-25 15:50:48 as along with 9 people and 1 group bertelsen ptrobajo apocapoc andrewclegg NickFurnham guhjy kshameer mingzhi frohike Orengo Group Journal Picks
	PubMed-EX: a web browser extension to enhance PubMed search with text mining features [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 3031-3032. by Richard T. Tsai, Hong-Jie Dai, Po-Ting Lai, Chi-Hsin Huang posted to tools textmining pubmed literature by lh49 on 2009-08-22 22:59:27 as along with 19 people and 2 groups robert85 daforerog jsatkosk reyez inesdesantiago dullhunk artaban421 biblio24 Zephyrus henk-cul sebastien_vigneau thegoose thegoose3 Gaetan operon guhjy lmichan sjcockell druvus BergmanLab dbmi-nlp
	A realistic assessment of methods for extracting gene/protein interactions from free text. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (28 July 2009), 233. by Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd posted to textmining by barriot on 2009-07-29 05:45:04 as along with 11 people and 4 groups henk-cul martingerner DTD102 satre farzanehs grahamc mitko sjcockell sillitoe andrewclegg cisevol dbmi-nlp Journal picks Orengo Group Journal Picks BergmanLab
	Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 177. by Sam Zaremba, Mila R. Santacruz, Thomas Hampton, et al.Panna Shetty, Joel Fedorko, Jon Whitmore, John Greene, Nicole Perna, Jeremy Glasner, Guy Plunkett, Matthew Shaker, David Pot posted to textmining by Effie to the group NaCTeM on 2009-07-06 23:18:35 as along with 10 people and 1 group zufar druvus behindtherabbit fgibson kiekyon leemond31 nuin liblab barriot Gaetan Journal picks
	Mining and visualizing the chemical content of large databases. [My Copy] Current opinion in drug discovery & development, Vol. 12, No. 3. (May 2009), pp. 367-375. by H. O. Villar, M. R. Hansen posted to textmining by liblab on 2009-07-03 14:38:15 as along with 1 person abhishek_tiwari
	@Note: a workbench for biomedical text mining. [My Copy] Journal of biomedical informatics, Vol. 42, No. 4. (22 August 2009), pp. 710-720. by Anália Lourenço, Rafael Carreira, Sónia Carneiro, et al.Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha posted to textmining by liblab on 2009-07-03 14:37:01 as along with 7 people and 1 group artaban421 kshameer zimbo1 henk-cul guhjy dullhunk reyez dbmi-nlp
	Mining chemical and biological information from the drug literature. [My Copy] Current opinion in drug discovery & development, Vol. 12, No. 3. (May 2009), pp. 376-387. by D. L. Banville posted to textmining by liblab on 2009-07-03 14:36:46 as along with 1 person abhishek_tiwari
	Improving classification in protein structure databases using text mining. [My Copy] BMC bioinformatics, Vol. 10 (05 May 2009), 129. by A. Koussounadis, O. C. Redfern, D. T. Jones posted to textmining by liblab on 2009-07-03 14:36:19 as along with 3 people henk-cul reyez idoerg
	Systematic investigation of time windows for adverse event data mining for recently approved drugs. [My Copy] Journal of clinical pharmacology, Vol. 49, No. 6. (June 2009), pp. 626-633. by A. M. Hochberg, M. Hauben, R. K. Pearson, D. J. O'Hara, S. J. Reisinger posted to textmining by liblab on 2009-07-03 14:35:39 as
	Predicting the graft survival for heart-lung transplantation patients: An integrated data mining methodology. [My Copy] International journal of medical informatics (2 June 2009) by Asil Oztekin, Dursun Delen, Zhenyu James J. Kong posted to textmining by liblab on 2009-07-03 14:35:01 as
	LitInspector: literature and signal transduction pathway mining in PubMed abstracts. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), gkp303. by M. Frisch, B. Klocke, M. Haltmeier, K. Frech posted to literaturemining textmining by liblab on 2009-07-03 14:32:19 as along with 3 people guhjy daforerog renatomilani
	PLAN2L: a web tool for integrated text mining and literature-based bioentity relation extraction. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009) by M. Krallinger, C. Rodriguez-Penagos, A. Tendulkar, A. Valencia posted to textmining by liblab on 2009-07-03 14:28:06 as along with 2 people mitko guhjy
	Mining literature for protein-protein interactions. [My Copy] Bioinformatics (Oxford, England), Vol. 17, No. 4. (1 April 2001), pp. 359-363. by E. M. Marcotte, I. Xenarios, D. Eisenberg posted to literaturemining ppi textmining by liblab on 2009-07-03 14:14:30 as along with 4 people daforerog msampson blackbart cjeans
	Text mining in healthcare. Applications and opportunities. [My Copy] Journal of healthcare information management : JHIM, Vol. 22, No. 3. (2008), pp. 52-56. by U. Raja, T. Mitchell, T. Day, J. M. Hardin posted to textmining by Effie to the group NaCTeM on 2009-05-26 08:46:18 as along with 2 people and 1 group liblab henk-cul dbmi-nlp
	Evaluating contributions of natural language parsers to protein-protein interaction extraction [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 394-400. by Yusuke Miyao, Kenji Sagae, Rune Sætre, Takuya Matsuzaki, Jun'ichi Tsujii posted to ppi textmining by liblab on 2009-05-11 15:14:46 as along with 6 people and 2 groups RNawaz Effie mstumpf behindtherabbit grahamc henk-cul NaCTeM dbmi-nlp
	SciMiner: web-based literature mining tool for target identification and functional enrichment analysis. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 6. (15 March 2009), pp. 838-840. by Junguk Hur, Adam D. Schuyler, David J. States, Eva L. Feldman posted to literaturemining textmining by liblab on 2009-05-11 15:11:44 as along with 9 people and 1 group jfr Scis0000002 reyez guhjy idonaldson pick600 mchelen zimbo1 dullhunk NaCTeM
	Collaborative text-annotation resource for disease-centered relation extraction from biomedical text. [My Copy] Journal of biomedical informatics (14 February 2009) by C Cano, T Monaghan, A Blanco, D P P. Wall, L Peshkin posted to textmining by liblab on 2009-05-11 15:11:17 as along with 2 people guhjy zimbo1
	Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text. [My Copy] BMC bioinformatics, Vol. 10 Suppl 2 (2009) by Yael Garten, Russ B. Altman posted to textmining by liblab on 2009-05-11 15:06:38 as along with 6 people and 1 group mitko fisherp dullhunk Effie zimbo1 guhjy NaCTeM
	Do you do text? [My Copy] Bioinformatics, Vol. 21, No. 23. (1 December 2005), pp. 4199-4200. by Christian Blaschke, Alexander Yeh, Evelyn Camon, et al.Marc Colosimo, Rolf Apweiler, Lynette Hirschman, Alfonso Valencia posted to textmining by liblab on 2009-05-11 15:04:51 as
	Extracting human protein interactions from MEDLINE using a full-sentence parser. [My Copy] Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 604-611. by N. Daraselia, A. Yuryev, S. Egorov, S. Novichkova, A. Nikitin, I. Mazo posted to ppi textmining by liblab on 2009-05-11 14:58:47 as along with 8 people and 2 groups henk-cul bqchinh irenas Enro miguel natsu zlu satre dbmi-nlp dbk-lab
	Critical assessment of information extraction systems in biology. [My Copy] Comparative and functional genomics, Vol. 4, No. 6. (2003), pp. 674-677. by C. Blaschke, L. Hirschman, A. Yeh, A. Valencia posted to ppi textmining by liblab on 2009-05-11 14:55:35 as
	Discovering patterns to extract protein-protein interactions from full texts [My Copy] Bioinformatics, Vol. 20, No. 18., 3604. by Minlie Huang, Xiaoyan Zhu, Yu Hao, Donald G. Payan, Kunbin Qu, Ming Li posted to ppi textmining by liblab on 2009-05-11 14:50:40 as along with 1 person zlu
	Extracting interactions between proteins from the literature. [My Copy] Journal of biomedical informatics, Vol. 41, No. 2. (15 April 2008), pp. 393-407. by D. Zhou, Y. He posted to ppi textmining by liblab on 2009-05-11 14:47:02 as along with 5 people and 1 group robert85 svozil satre gmonce guhjy Bioinformatics
	Automatic classification of protein functions from the literature. [My Copy] Comparative and functional genomics, Vol. 4, No. 1. (2003), pp. 75-79. by C. Blaschke, A. Valencia posted to textmining by liblab on 2009-05-11 14:43:19 as
	Extracting information automatically from biological literature [My Copy] Comparative and Functional Genomics, Vol. 2, No. 5. (October 2001), pp. 310-313. by C. Blaschke, R. Hoffmann, Carlos, Valencia posted to textmining by liblab on 2009-05-11 14:38:04 as along with 1 person and 1 group yas T_lab
	Text mining for biology - the way forward: opinions from leading scientists [My Copy] Genome Biology, Vol. 9, No. Suppl 2. (2008), S7. by Russ Altman, Casey Bergman, Judith Blake, et al.Christian Blaschke, Aaron Cohen, Frank Gannon, Les Grivell, Udo Hahn, William Hersh, Lynette Hirschman, Lars Jensen, Martin Krallinger, Barend Mons, Sean O'Donoghue, Manuel Peitsch, Dietrich R. Schuhmann, Hagit Shatkay, Alfonso Valencia posted to textmining by liblab on 2009-05-11 14:36:59 as along with 13 people and 1 group lmichan artaban421 abhishek_tiwari daforerog kiekyon henk-cul fisherp hpiwowar guhjy barriot imrchen fgibson dullhunk dbmi-nlp
	Creating reference datasets for systems biology applications using text mining. [My Copy] Annals of the New York Academy of Sciences, Vol. 1158, No. 1. (March 2009), pp. 14-28. by Martin Krallinger, Ana Maria M. Rojas, Alfonso Valencia posted to textmining by liblab on 2009-05-11 14:32:47 as along with 3 people and 1 group lmichan zimbo1 henk-cul dbmi-nlp
	Automatic document classification of biological literature. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (07 August 2006), 370. by David Chen, Hans-Michael M. Müller, Paul W. Sternberg posted to textmining by liblab on 2009-05-11 14:16:42 as along with 7 people and 3 groups druvus thegoose2 tharris irenas Enro yas ananthrk C. elegans / WormBase dbk-lab T_lab
	Textpresso: an ontology-based information retrieval and extraction system for biological literature. [My Copy] PLoS biology, Vol. 2, No. 11. (November 2004) by Hans-Michael M. Müller, Eimear E. Kenny, Paul W. Sternberg posted to textmining by liblab on 2009-05-11 14:15:10 as along with 16 people and 4 groups artaban421 mitko thegoose2 tharris irenas Enro guhjy yas dullhunk hpiwowar fisherp zlu daniel_schober diogomartins mroos vlachmore C. elegans / WormBase dbk-lab T_lab AID
	Text mining and ontologies in biomedicine: Making sense of raw text [My Copy] Brief Bioinform, Vol. 6, No. 3. (1 January 2005), pp. 239-251. by Irena Spasic, Sophia Ananiadou, John McNaught, Anand Kumar posted to textmining by liblab on 2009-05-11 14:13:47 as along with 17 people and 5 groups lmichan tsunol artaban421 daforerog svozil arafalov henk-cul farzanehs lauras irenas andytseng yas hpiwowar helliontroy johnkork daniel_schober yggdrasil Bioinformatics NLP dbk-lab T_lab biomedical-nlp
	New directions in biomedical text annotation: definitions, guidelines and corpus construction [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (25 July 2006), 356. by W. John Wilbur, Andrey Rzhetsky, Hagit Shatkay posted to textmining by liblab on 2009-05-11 14:11:24 as along with 8 people and 2 groups artaban421 lmichan henk-cul fisherp helliontroy jacky957 balex wchapman biomedical-nlp dbmi-nlp
	Linking genes to literature: text mining, information extraction, and retrieval applications for biology [My Copy] Genome Biology, Vol. 9, No. Suppl 2. (2008), S8. by Martin Krallinger, Alfonso Valencia, Lynette Hirschman posted to ppi textmining by liblab on 2009-05-11 14:10:34 as along with 13 people and 1 group artaban421 druvus satre daforerog mitko lmichan aberamanda henk-cul Alois guhjy dullhunk bouncingbudha goettl dbmi-nlp
	Concept mining for indexing medical literature [My Copy] Engineering Applications of Artificial Intelligence, Vol. 19, No. 4. (June 2006), pp. 411-417. by I. Bichindaritz, S. Akkineni posted to conceptmining textmining by liblab on 2009-05-11 14:07:13 as
	Text-mining approaches in molecular biology and biomedicine. [My Copy] Drug Discov Today, Vol. 10, No. 6. (15 March 2005), pp. 439-445. by M. Krallinger, R. A. Erhardt, A. Valencia posted to textmining by liblab on 2009-05-11 14:06:31 as along with 8 people and 1 group eesruiz lmichan henk-cul irenas kuhn textoris josepe kallberg dbk-lab
	Getting to the (c)ore of knowledge: mining biomedical literature [My Copy] International Journal of Medical Informatics, Vol. 67, No. 1-3. (04 December 2002), pp. 7-18. by Berry de Bruijn, Joel Martin posted to literaturemining textmining by liblab on 2009-05-11 14:06:06 as along with 1 person devakiram
	Text Mining [My Copy] (2006), pp. 621-624. by W. Black posted to textmining by liblab on 2009-05-11 14:04:29 as
	Text mining and its potential applications in systems biology. [My Copy] Trends Biotechnol (11 October 2006) by Sophia Ananiadou, Douglas B B. Kell, Jun-Ichi I. Tsujii posted to textmining by liblab on 2009-05-11 14:03:36 as along with 17 people and 3 groups artaban421 eesruiz henk-cul guhjy irenas jfr yas dullhunk fisherp jacky957 daniel_schober dejori pablomendes pmendes TheresaNiederberger alanrw satre ImagCom - Biomedical Text Computing dbk-lab T_lab
	Status of text-mining techniques applied to biomedical text [My Copy] Drug Discovery Today, Vol. 11, No. 7-8. (April 2006), pp. 315-325. by R. Erhardt, R. Schneider, C. Blaschke posted to textmining by liblab on 2009-05-11 14:02:58 as along with 18 people and 2 groups holopoj mitko fisherp svozil Zephyrus ogenex lesikv henk-cul bqchinh Enro guhjy hpiwowar ibuch mroos TheresaNiederberger akastrin aliekens irenas Bioinformatics AID
	A text-mining perspective on the requirements for electronically annotated abstracts [My Copy] FEBS Letters, Vol. 582, No. 8. (09 April 2008), pp. 1178-1181. by F. Leitner, A. Valencia posted to ppi textmining by liblab on 2009-05-11 13:55:31 as along with 5 people henk-cul dullhunk satre ianturton guhjy
	Supporting Systematic Reviews Using Text Mining [My Copy] Social Science Computer Review, Vol. 27, No. 4. (1 November 2009), pp. 509-523. by Sophia Ananiadou, Brian Rea, Naoaki Okazaki, Rob Procter, James Thomas posted to reviews systematic textmining by Effie to the group NaCTeM on 2009-05-07 23:24:24 as along with 1 person dullhunk
	Literature mining in support of drug discovery [My Copy] Brief Bioinform, Vol. 9, No. 6. (1 November 2008), pp. 479-492. by Pankaj Agarwal, David B. Searls posted to textmining by Effie to the group NaCTeM on 2009-04-22 08:45:19 as along with 4 people abhishek_tiwari nuin guhjy dullhunk
	Facts from text: can text mining help to scale-up high-quality manual curation of gene products with ontologies? [My Copy] Brief Bioinform, Vol. 9, No. 6. (1 November 2008), pp. 466-478. by Rainer Winnenburg, Thomas Wachter, Conrad Plake, Andreas Doms, Michael Schroeder posted to curation textmining by Effie to the group NaCTeM on 2009-04-18 02:32:40 as along with 7 people daforerog abhishek_tiwari Keywan skap guhjy Cortel druvus
	Is searching full text more effective than searching abstracts? [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 46. by Jimmy Lin posted to textmining by coela on 2009-04-06 11:13:16 as along with 13 people and 2 groups CulCog fgibson robert85 lmichan martingerner Effie daforerog almaw kaniko nuin Gaetan cisevol dullhunk NaCTeM BergmanLab
	Text mining and visualization tools – Impressions of emerging capabilities☆ [My Copy] World Patent Information, Vol. 30, No. 4. (December 2008), pp. 280-293. by Y. Yang, L. Akers, T. Klose, C. Barcelonyang posted to textmining visualisation by kizzie on 2009-03-26 15:29:09 as along with 3 people lafuente Enro zimbo1
	Target discovery from data mining approaches. [My Copy] Drug discovery today, Vol. 14, No. 3-4. (7 February 2009), pp. 147-154. by Yongliang Yang, S. James Adelstein, Amin I. Kassis posted to chemogenomic datamining microarray proteomic review textmining by sschurer on 2009-02-04 15:33:14 as along with 8 people and 1 group jfr agomez eesruiz tonamswish mitko nicklynch guhjy zimbo1 ImagCom - Biomedical Text Computing
	PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites [My Copy] Nucl. Acids Res. (16 May 2008), gkn296. by Dean Cheng, Craig Knox, Nelson Young, Paul Stothard, Sambasivarao Damaraju, David S. Wishart posted to bioinformatics textmining by mircea on 2009-01-18 00:18:47 as along with 5 people and 1 group artaban421 Gaetan guhjy lmichan irenas e-research en ciencias médicas y biológicas

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ppi	30
bionlp	29
bioinformatics	18
som	18
datamining	14
nlp	13
biomedicine	12
ner	10
biomining	8
networks	8
ontology	8
ie	7
kohonengroup	7
annotation	6
knowledgediscovery	6
literature	6
review	6
informationextraction	5
literaturemining	5
parsing	5
svm	5
fulltext	4
informationretrieval	4
methodspaper	4
rulebased	4
bibliometrics	3
biocreative	3
citation	3
clustering	3
corpus	3
dictionary	3
genomics	3
interaction	3
literaturebaseddiscovery	3
machinelearning	3
medline	3
pathtext	3
prediction	3
radiology	3
transcription	3
abstracts	2
bio	2
candidategenes	2
classification	2
curation	2
disease	2
drugs	2
genes	2
genevariants	2
google	2
hypothesisgeneration	2
imaging	2
indexing	2
informatics	2
integration	2
interactions	2
ir	2
ontologies	2
overview	2
phenotype	2
protein	2
reviews	2
system	2
systematic	2
algorithm	1
atr	1
component	1
comprehensive	1
conceptmining	1
drug	1
drugclassification	1
gorelated	1
human	1
information-retrieval	1
information_discovery	1
information_retrieval	1
java	1
kinetic	1
mapping	1
metabolites	1
omim	1
p	1
pathway	1
pathwayreconstruction	1
phosphorylation	1
probabilistic	1
prokaryote	1
protein_protein	1
relationextraction	1
semantics	1
semanticweb	1
streams	1
textbook	1
tool	1
tools	1
ui-system	1
umls	1
unstructured	1
visualisation	1
web	1

Tag textmining [at least 200 articles] Export

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