Tag transcription [at least 200 articles] Export

Recent papers classified by the tag transcription.

	The transcription unit architecture of the Escherichia coli genome. [My Copy] Nature biotechnology (25 October 2009) by Byung-Kwan K. Cho, Karsten Zengler, Yu Qiu, et al.Young Seoub S. Park, Eric M. Knight, Christian L. Barrett, Yuan Gao, Bernhard O. Palsson posted to translation transcription escherichia_coli by rsaito on 2009-11-08 11:24:34 as
	Students transcribing tasks: noticing fluency, accuracy, and complexity [My Copy] ELT J (3 November 2009), ccp081. by Christopher Stillwell, Brad Curabba, Kamsin Alexander, et al.Andrew Kidd, Euna Kim, Paul Stone, Christopher Wyle posted to transcription fluency complexity accuracy by rickl on 2009-11-08 11:21:12 as
	Generic eukaryotic core promoter prediction using structural features of DNA [My Copy] Genome Research, Vol. 18, No. 2. (20 February 2008), pp. 310-323. by Thomas Abeel, Yvan Saeys, Eric Bonnet, Pierre Rouze, Yves Van de Peer posted to transcription promoter genomics bioinformatics by timflutre on 2009-11-06 09:53:22 as along with 8 people chvlyl hagechouchin443 rsaito tonamswish cjeans cabbagezs maximilianh idonaldson
	Invariant Distribution of Promoter Activities in Escherichia coli [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (23 October 2009), e1000545. by Alon Zaslaver, Shai Kaplan, Anat Bren, et al.Adrian Jinich, Avi Mayo, Erez Dekel, Uri Alon, Shalev Itzkovitz posted to transcription promoters gene_expression escherichia_coli by dbikard on 2009-11-05 20:14:08 as along with 1 person jjray
	Pre-mRNA processing reaches back to transcription and ahead to translation. [My Copy] Cell, Vol. 136, No. 4. (20 February 2009), pp. 688-700. by M. J. Moore, N. J. Proudfoot posted to translation transcription splicing rna polyadenylation by aprickett on 2009-11-05 15:04:36 as along with 2 people heliopais rschulz
	Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 47. (20 November 2007), pp. 18577-18582. by Marta L. Wayne, Marina Telonis-Scott, Lisa M. Bono, et al.Larry Harshman, Artyom Kopp, Sergey V. Nuzhdin, Lauren M. McIntyre posted to variability transcription sex_chromosomes drosophila by daveGerrard on 2009-11-05 11:44:50 as along with 3 people operon jbsaltz mimulus_99
	Hypoxia inducible factor 1 alpha (HIF-1alpha) induces corticosteroid-insensitive inflammation via reduction of histone deacetylase-2 (HDAC2) transcription. [My Copy] The Journal of biological chemistry (30 October 2009) by Catherine E. Charron, Pai-Chien C. Chou, David J. Coutts, et al.Vaibhav Kumar, Masako To, Kenichi Akashi, Liao Pinhu, Mark Griffiths, Ian M. Adcock, Peter J. Barnes, Kazuhiro Ito posted to via transcription reduction of inflammation inducible induces hypoxia histone hif-1alpha hdac2 factor deacetylase-2 corticosteroid-insensitive alpha 1 by StemCellWorkstation on 2009-11-04 22:29:26 as
	Hypoxic repression of endothelial nitric-oxide synthase transcription is coupled with eviction of promoter histones. [My Copy] The Journal of biological chemistry (30 October 2009) by Jason E. Fish, Matthew S. Yan, Charles C. Matouk, et al.Rosanne St Bernard, Jyun David D. Ho, Anna Gavryushova, Deepak Srivastava, Philip A. Marsden posted to with transcription synthase repression promoter of nitric-oxide is hypoxic histones eviction endothelial coupled by StemCellWorkstation on 2009-11-04 22:28:56 as
	Hypoxia Induces Transcription Factor ETS-1 via the Activity of Hypoxia-Inducible Factor-1 [My Copy] Biochemical and Biophysical Research Communications, Vol. 289, No. 1. (23 November 2001), pp. 39-43. by M. Oikawa posted to via transcription the of induces hypoxia-inducible hypoxia factor-1 factor ets-1 activity by StemCellWorkstation on 2009-11-04 18:53:32 as
	p16INK4A Sensitizes Human Leukemia Cells to FAS- and Glucocorticoid-induced Apoptosis via Induction of BBC3/Puma and Repression of MCL1 and BCL2 [My Copy] Journal of Biological Chemistry, Vol. 284, No. 45. (6 November 2009), pp. 30933-30940. by Petra Obexer, Judith Hagenbuchner, Martina Rupp, et al.Christina Salvador, Markus Holzner, Martin Deutsch, Verena Porto, Reinhard Kofler, Thomas Unterkircher, Michael J. Ausserlechner posted to transcription puma p16ink4a obexer09pdf mcl-1 apoptosis by paulschlesinger on 2009-10-30 19:14:50 as
	Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets. [My Copy] Genome research (14 April 2008) by Chaim Linhart, Yonit Halperin, Ron Shamir posted to transcription platform motif microrna metazoan factor discovery amadeus by dolchan on 2009-10-29 17:18:03 as along with 12 people and 1 group akshayk wowalz natstreet valeriehilgers jfr ealloza idonaldson maralena fpattyn isimpson tmmurali maximilianh BergmanLab
	A wave of nascent transcription on activated human genes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 43. (27 October 2009), pp. 18357-18361. by Youichiro Wada, Yoshihiro Ohta, Meng Xu, et al.Shuichi Tsutsumi, Takashi Minami, Kenji Inoue, Daisuke Komura, Jun'ichi Kitakami, Nobuhiko Oshida, Argyris Papantonis, Akashi Izumi, Mika Kobayashi, Hiroko Meguro, Yasuharu Kanki, Imari Mimura, Kazuki Yamamoto, Chikage Mataki, Takao Hamakubo, Katsuhiko Shirahige, Hiroyuki Aburatani, Hiroshi Kimura, Tatsuhiko Kodama, Peter R. Cook, Sigeo Ihara posted to transcription by daed on 2009-10-29 10:56:15 as along with 3 people and 2 groups inesdesantiago gbloeb cvaldes CTCF Chromatin
	Diabetes mellitus due to misfolding of a beta-cell transcription factor: stereospecific frustration of a Schellman motif in HNF-1alpha. [My Copy] Journal of molecular biology, Vol. 362, No. 3. (22 September 2006), pp. 414-429. by Narendra Narayana, Nelson B. Phillips, Qing-xin X. Hua, Wenhua Jia, Michael A. Weiss posted to transcription schellman naraya06pdf motif hnf-1a frustration factor by paulschlesinger on 2009-10-27 23:08:48 as
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to transcription mirna by samgj on 2009-10-27 14:34:21 as along with 8 people and 2 groups heliopais polivares megraw inesdesantiago fpattyn djkt fenghezi idonaldson microRNA Neuroblastoma
	Evolution of Eukaryotic Transcription Circuits [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1797-1799. by Brian B. Tuch, Hao Li, Alexander D. Johnson posted to yeast transcription selection rewiring review evolution by biomcgary on 2009-10-26 20:27:59 as along with 6 people roys balabu emptyhb AbnerCYH djkt bpcusack
	A nucleoprotein-hairpin in transcription regulation. [My Copy] Journal of structural biology (26 June 2009) by Paloma Gutiérrez Del Arroyo, Marisela Vélez, Oliver Piétrement, Margarita Salas, José L. Carrascosa, Ana Camacho posted to transcription promoter nucleoprotein-hairpin atomic_force_microscopy afm by sebastien_vigneau on 2009-10-26 19:31:08 as
	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. [My Copy] Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816. by E. Encode posted to transcription genomics encode chromatin by daveGerrard on 2009-10-26 09:56:14 as along with 25 people and 2 groups bartjacobse daforerog isimpson sharpton jessopher timhubbard scjparker polivares coela ilyashl aprasad myrtilus daed waszak guhjy jfr chad_davis kengg olympos blobbybirdman shikin fpattyn yevishere elfar eskay Bioinformatics UH - Computational Biology
	Transcription Dynamics [My Copy] Molecular Cell, Vol. 35, No. 6. (24 September 2009), pp. 741-753. by Gordon L. Hager, James G. McNally, Tom Misteli posted to transcriptional-regulation transcription chromatin by dchughes on 2009-10-24 07:47:24 as along with 1 person inesdesantiago
	A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome [My Copy] Genome Research, Vol. 19, No. 3. (4 March 2009), pp. 360-371. by Bryan J. Venters, B. Franklin Pugh posted to yeast transcription rna_polymerase promoter chromatin by venancio on 2009-10-23 23:42:29 as along with 6 people and 1 group TheresaNiederberger cisevol inesdesantiago idonaldson rdowell JustinCrocker BergmanLab
	Reconstructing prokaryotic transcriptional regulatory networks: lessons from actinobacteria [My Copy] Journal of Biology, Vol. 8, No. 3. (15 April 2009), 29. by Thiago Venancio, L. Aravind posted to transcription tfs systems_biology networks evolution bacteria by venancio on 2009-10-23 18:49:31 as along with 1 person robfsouza
	Distinguishing direct versus indirect transcription factorâDNA interactions [My Copy] Genome Research, Vol. 19, No. 11. (3 November 2009), pp. 2090-2100. by Raluca GordÃ¢n, Alexander J. Hartemink, Martha L. Bulyk posted to yeast transcription tfs networks dataset chromatin by venancio on 2009-10-23 18:32:49 as along with 9 people djkt vingron owhitney tmmurali emptyhb idonaldson maximilianh jbhiatt frohike
	Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions [My Copy] Genome Biology, Vol. 10, No. 7. (23 July 2009), R80. by Stewart MacArthur, Xiao Y. Li, Jingyi Li, et al.James Brown, Hou C. Chu, Lucy Zeng, Brandi Grondona, Aaron Hechmer, Lisa Simirenko, Soile Keranen, David Knowles, Mark Stapleton, Peter Bickel, Mark Biggin, Michael Eisen posted to transcription tfs insects drosophila development by venancio on 2009-10-23 18:30:06 as along with 11 people and 2 groups aalibes fenghezi idonaldson daveGerrard megraw scjparker maximilianh djkt isimpson Stew druvus BergmanLab Bioinformatics - CRUK
	Open chromatin encoded in DNA sequence is the signature of 'master' replication origins in human cells [My Copy] Nucl. Acids Res., Vol. 37, No. 18. (1 October 2009), pp. 6064-6075. by Benjamin Audit, Lamia Zaghloul, Cedric Vaillant, et al.Guillaume Chevereau, Yves d'Aubenton-Carafa, Claude Thermes, Alain Arneodo posted to transcription sites replication_origins replication_initiation fragile chromatin by fpattyn on 2009-10-23 10:26:11 as along with 2 people and 2 groups inesdesantiago sebastien_vigneau Epigenetics Journal picks
	Functional organization of the transcriptome in human brain [My Copy] Nature Neuroscience, Vol. 11, No. 11. (12 October 2008), pp. 1271-1282. by Michael C. Oldham, Genevieve Konopka, Kazuya Iwamoto, et al.Peter Langfelder, Tadafumi Kato, Steve Horvath, Daniel H. Geschwind posted to transcriptome transcription regulation neurogenesis human by cassj to the group KCL & UCL Bioinformatics on 2009-10-23 10:24:45 as along with 8 people burak jeremymiller daforerog druvus balicea dubhelix isimpson psique
	Cotranscriptionality: The Transcription Elongation Complex as a Nexus for Nuclear Transactions [My Copy] Vol. 36, No. 2. (23 October 2009), pp. 178-191. by Roberto Perales, David Bentley posted to transcription review nucleus gene_expression eukaryote by jjray on 2009-10-22 21:50:12 as
	A transcription factor affinity-based code for mammalian transcription initiation [My Copy] Genome Research, Vol. 19, No. 4. (13 April 2009), pp. 644-656. by Molly Megraw, Fernando Pereira, Shane T. Jensen, Uwe Ohler, Artemis G. Hatzigeorgiou posted to microrna-transcriptional-regulation transcription_factor transcription microrna-regulation microrna by heliopais on 2009-10-22 14:40:10 as along with 9 people and 1 group guhjy tonamswish rpatward siebert biozhang2001 absterga jbhiatt samgj daforerog microRNA
	Assigning roles to protein mentions: The case of transcription factors [My Copy] Journal of Biomedical Informatics, Vol. 42, No. 5. (10 October 2009), pp. 887-894. by Hui Yang, John Keane, Casey M. Bergman, Goran Nenadic posted to transcription_factors transcription ontology go by operon on 2009-10-21 16:35:26 as along with 3 people and 1 group druvus dullhunk henk-cul dbmi-nlp
	Analysis of combinatorial cis-regulation in synthetic and genomic promoters [My Copy] Nature, Vol. 457, No. 7226. (23 November 2008), pp. 215-218. by Jason Gertz, Eric D. Siggia, Barak A. Cohen posted to yeast transcription synthetic promoter by Vincent_Rouilly on 2009-10-21 11:59:40 as along with 17 people and 4 groups pcarbo emptyhb TRHvidsten rpatward jbhiatt lusk maximilianh roys dpollard druvus sebastien_vigneau pengchy sandersl djkt siebert isimpson xianjun TranscriptionalRegulationWithThermodynamicModels RockmanLab cis-regulatory-evolution microbiology_nijmegen
	Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing. [My Copy] BMC genomics, Vol. 10 (21 January 2009), 37. by Philippe Lefrançois, Ghia M. Euskirchen, Raymond K. Auerbach, et al.Joel Rozowsky, Theodore Gibson, Christopher M. Yellman, Mark Gerstein, Michael Snyder posted to yeast transcription_factors transcription chip-seq by Vincent_Rouilly on 2009-10-20 15:52:37 as along with 5 people guhjy lusk emptyhb WanderingAengus abizar
	Direct methods for studying transcription regulatory proteins and RNA polymerase in bacteria [My Copy] Current Opinion in Microbiology, Vol. 12, No. 5. (15 October 2009), pp. 531-535. by David C. Grainger, David J. Lee, Stephen J. W. Busby posted to transcription_factors transcription rnap promoter chip by Vincent_Rouilly on 2009-10-20 11:06:59 as
	Transcription of macrophage IGF-I exon 1 is positively regulated by the 5'-untranslated region and negatively regulated by the 5'-flanking region [My Copy] Am J Physiol Lung Cell Mol Physiol, Vol. 288, No. 6. (1 June 2005), pp. L1089-1098. by Murry W. Wynes, David W. H. Riches posted to transcription macrophage lung ipf igf gif-1 fibrosis by amromeo on 2009-10-19 16:36:46 as
	RNA polymerase II-TFIIB structure and mechanism of transcription initiation [My Copy] Nature (9 October 2009) by Dirk Kostrewa, Mirijam E. Zeller, Karim-Jean Armache, et al.Martin Seizl, Kristin Leike, Michael Thomm, Patrick Cramer posted to transcription by cvaldes on 2009-10-16 14:51:05 as
	Genome-wide identification of post-translational modulators of transcription factor activity in human B cells [My Copy] Nature Biotechnology, Vol. 27, No. 9. (09 September 2009), pp. 829-837. by Kai Wang, Masumichi Saito, Brygida C. Bisikirska, et al.Mariano J. Alvarez, Wei K. Lim, Presha Rajbhandari, Qiong Shen, Ilya Nemenman, Katia Basso, Adam A. Margolin, Ulf Klein, Riccardo Dalla-Favera, Andrea Califano posted to transcription post-translational network kinase inference factor cls-anton aracne by ptrobajo on 2009-10-16 10:56:01 as along with 2 people heliopais leliavski
	Discovery of protein-DNA interactions by penalized multivariate regression. [My Copy] Nucleic acids research, Vol. 37, No. 16. (September 2009), pp. 5246-5254. by Leonid Zamdborg, Ping Ma posted to transcription_factors transcription regression penalization factor by rdiaz on 2009-10-15 17:56:32 as
	Transcriptional rewiring: the proof is in the eating. [My Copy] Current biology : CB, Vol. 17, No. 16. (21 August 2007) by Antonis Rokas, Chris Todd T. Hittinger posted to transcription rewiring gene_regulation by biomcgary on 2009-10-13 20:36:40 as
	Fragile X mental retardation protein regulates the levels of scaffold proteins and glutamate receptors in postsynaptic densities. [My Copy] The Journal of biological chemistry, Vol. 284, No. 38. (18 September 2009), pp. 25479-25487. by Janin Schütt, Katrin Falley, Dietmar Richter, Hans-Jürgen J. Kreienkamp, Stefan Kindler posted to transcription thesis knock_out_mice imported_from_pubmed by manduca on 2009-10-12 19:07:48 as
	Alternative polyadenylation: A mechanism maximizing transcriptome diversity in higher eukaryotes. [My Copy] Plant signaling & behavior, Vol. 4, No. 5. (May 2009), pp. 440-442. by Denghui Xing, Qingshun Quinn Q. Li posted to transcription polyadenylation plants diversity by clearbluespring on 2009-10-12 17:14:46 as along with 1 person aprickett
	The nuclear periphery of embryonic stem cells is a transcriptionally permissive and repressive compartment [My Copy] J Cell Sci, Vol. 122, No. 20. (15 October 2009), pp. 3729-3737. by Li Luo, Katherine L. Gassman, Lydia M. Petell, Christian L. Wilson, Joerg Bewersdorf, Lindsay S. Shopland posted to transcription status periphery nuclear and by fengy2 on 2009-10-10 01:56:20 as along with 1 person inesdesantiago
	Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 257-263. by Ido Amit, Manuel Garber, Nicolas Chevrier, et al.Ana P. Leite, Yoni Donner, Thomas Eisenhaure, Mitchell Guttman, Jennifer K. Grenier, Weibo Li, Or Zuk, Lisa A. Schubert, Brian Birditt, Tal Shay, Alon Goren, Xiaolan Zhang, Zachary Smith, Raquel Deering, Rebecca C. McDonald, Moran Cabili, Bradley E. Bernstein, John L. Rinn, Alex Meissner, David E. Root, Nir Hacohen, Aviv Regev posted to transcriptome transcription systems_biology infectionhost-pathogen_interaction gene_expression by leliavski on 2009-10-09 19:52:15 as along with 9 people xianjun inesdesantiago TRHvidsten agonzale gbloeb roys ptrobajo natgoodman tmmurali
	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Raja Jothi, S. Balaji, Arthur Wuster, et al.Joshua A. Grochow, Jorg Gsponer, Teresa M. Przytycka, L. Aravind, Madan M. Babu posted to transcription regulatory network link heirarchy genomic factor dynamics architecture analysis by dswan on 2009-10-09 14:21:25 as along with 12 people ashishanand apocapoc brianb sjcockell zwang fenghezi rdiaz megraw poirel TRHvidsten jjray biomcgary
	Distanced Data: Transcribing Other People's Research Tapes [My Copy] Canadian Journal of Education / Revue canadienne de l'éducation, Vol. 27, No. 2/3. (2002), pp. 291-310. by Susan A. Tilley, Kelly D. Powick posted to transcription methods data by jdoyle on 2009-10-09 10:22:12 as
	Intracellular biology and virulence determinants of Francisella tularensis revealed by transcriptional profiling inside macrophages. [My Copy] Cellular microbiology, Vol. 11, No. 7. (July 2009), pp. 1128-1150. by Tara D. Wehrly, Audrey Chong, Kimmo Virtaneva, et al.Dan E. Sturdevant, Robert Child, Jessica A. Edwards, Dedeke Brouwer, Vinod Nair, Elizabeth R. Fischer, Luke Wicke, Alissa J. Curda, John J. Kupko, Craig Martens, Deborah D. Crane, Catharine M. Bosio, Stephen F. Porcella, Jean Celli posted to transcription pathogen francisella by druvus on 2009-10-08 10:13:23 as
	Francisella tularensis novicida proteomic and transcriptomic data integration and annotation based on semantic web technologies [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 10. (2009), S3. by Nadia Anwar, Ela Hunt posted to transcription semantic proteom francisella by druvus on 2009-10-07 13:20:43 as along with 1 person dullhunk
	Ets2 transcription factor in normal and neoplastic human breast tissue [My Copy] European Journal of Cancer, Vol. 42, No. 4. (March 2006), pp. 485-491. by Y. Buggy, T. Maguire, E. McDermott, A. Hill, N. Ohiggins, M. Duffy posted to transcription gene-expression ets2 breast by Zephyrus on 2009-10-06 00:32:29 as
	Protein occupancy landscape of a bacterial genome. [My Copy] Molecular cell, Vol. 35, No. 2. (31 July 2009), pp. 247-253. by Tiffany Vora, Alison K. Hottes, Saeed Tavazoie posted to whole-genome transcription chip-seq bacteria by sconlan on 2009-10-05 16:42:42 as along with 2 people kintoki ashkelon13
	From signatures to models: understanding cancer using microarrays [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S38-S45. by Eran Segal, Nir Friedman, Naftali Kaminski, Aviv Regev, Daphne Koller posted to transcription signatures processes networks multi-scale molecular modules modular models microarray mechanistic gene-regulation disease comparative cancer by bertelsen on 2009-10-05 15:56:21 as along with 13 people and 1 group chasmand roys lwaldron cswinburne aalibes textoris troels_marstrand wnpx nirfriedman rdiaz sampath shikin srp33 GeneGo
	Redox-sensitive transcription factors as prime targets for chemoprevention with anti-inflammatory and antioxidative phytochemicals. [My Copy] The Journal of nutrition, Vol. 135, No. 12 Suppl. (December 2005) by Young-Joon J. Surh, Joydeb Kumar K. Kundu, Hye-Kyung K. Na, Jeong-Sang S. Lee posted to transcription redox nrf2 nfe2l2 factors by greg on 2009-10-05 00:34:42 as along with 1 person imouthesmp
	The transcriptional response after oxidative stress is defective in Cockayne syndrome group B cells [My Copy] Oncogene, Vol. 22, No. 8. (27 February 2003), pp. 1135-1149. by Kasper J. Kyng, Alfred May, Robert M. Brosh, et al.Wen-Hsing Cheng, Catheryne Chen, Kevin G. Becker, Vilhelm A. Bohr posted to transcription gene expression csb cockayne by greg on 2009-10-05 00:17:15 as
	Transcriptome-based determination of multiple transcription regulator activities in Escherichia coli by using network component analysis [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 2. (13 January 2004), pp. 641-646. by Katy C. Kao, Young-Lyeol Yang, Riccardo Boscolo, Chiara Sabatti, Vwani Roychowdhury, James C. Liao posted to transcriptome transcription regulators network factor-analysis component by bertelsen on 2009-10-04 16:51:37 as
	Deregulation of c-myc by translocation of the alpha-locus of the T-cell receptor in T-cell leukemias. [My Copy] Science (New York, N.Y.), Vol. 232, No. 4752. (16 May 1986), pp. 884-886. by J. Erikson, L. Finger, L. Sun, et al.A. ar-Rushdi, K. Nishikura, J. Minowada, J. Finan, B. S. Emanuel, P. C. Nowell, C. M. Croce posted to translocation transcription t-cells myc immunology cancer by tibbitts on 2009-10-02 09:47:22 as

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regulation	430
factor	223
review	193
network	167
yeast	165
chromatin	161
evolution	148
promoter	136
expression	131
drosophila	125
binding	106
gene	106
rna	104
for-the-review	95
biodegradation	90
elegans	83
nematode	80
celegans	79
c_elegans	78
caenorhabditis_elegans	78
wormbase	78
genomics	75
article	74
genome	71
polymerase	64
dna	61
motif	55
microarray	54
regulatory	53
epigenetics	51
microrna	51
networks	51
cancer	50
elongation	47
human	47
translation	47
bioinformatics	46
protein	46
transcriptome	46
prediction	45
bacteria	44
histone	44
cloned_genes	42
factors	41
transcriptional-regulation	41
gene_regulation	40
mrna	40
antisense	39
development	39
gene_expression	37
integration	37
initiation	35
methylation	35
genetics	33
noise	32
site	32
gene-expression	31
tfbs	31
conserved	30
trna	30
mouse	29
model	28
nucleosome	28
mirna	27
rnap	27
dna_sequence	26
activator	25
chromosomes	25
splicing	25
activation	24
cell	24
transcription_regulation	24
analysis	23
biology	23
mediator	23
ncrna	23
sequencing	23
cisreg	22
tf	22
transcription_factor	22
sequence	21
breast	20
differentiation	20
genome-wide	20
mammals	20
receptor	20
remodeling	20
replication	20
genetic	19
heat_shock	19
hematopoiesis	19
imprinting	19
mathematical_model	19
structure	19
chip	18
enhancers	18
myc	18
nucleus	18
stochastic	18
transcription_factors	18

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