Tag transcriptionfactor [26 articles] Export

Recent papers classified by the tag transcriptionfactor.

	A Simple Cipher Governs DNA Recognition by TAL Effectors [My Copy] Science In Science, Vol. 326, No. 5959. (11 December 2009), 1501. by Matthew J. Moscou, Adam J. Bogdanove posted to transcriptionfactor motif bioinformatics by stubrown on 2009-11-17 18:03:35 as along with 3 people robfsouza icq242500260 Dnogas
	Computation for ChIP-seq and RNA-seq studies [My Copy] Nature Methods In Nat Meth, Vol. 6, No. 11s. (15 October 2009), pp. S22-S32. by Shirley Pepke, Barbara Wold, Ali Mortazavi posted to transcriptome transcriptionfactor software rnaseq review nextgen chipseq bioinformatics by stubrown on 2009-11-13 14:46:47 as along with 27 people and 2 groups humburg fenghezi n00c ongenetics urgi Jporci pst epigenetics timflutre molnet-mna Vincent_Rouilly guhjy cajunsushi mpizbioinfo hzoltan robertrentzsch xingxu oannes74 tonamswish inesdesantiago Baschl polivares jwfoley druvus GeeSharpMinor chvlyl heliopais molnet-macs Orengo Group Journal Picks
	Genomic tools for dissecting oncogenic transcriptional networks in human leukemia [My Copy] Leukemia, Vol. 23, No. 7. (22 January 2009), pp. 1236-1242. by T. Palomero, A. A. Ferrando posted to transcriptionfactor review nextgen histone chipseq by stubrown on 2009-08-25 19:43:10 as along with 1 person abizar
	Insights from genomic profiling of transcription factors. [My Copy] Nature reviews. Genetics, Vol. 10, No. 9. (11 September 2009), pp. 605-616. by Peggy J. Farnham posted to transcriptionfactor review nextgen chipseq by stubrown on 2009-08-21 20:37:28 as along with 19 people and 2 groups provero bsamal heliopais inesdesantiago fenghezi nklee samanthacooper fpattyn druvus frohike qayub megraw TRHvidsten mkiyer ericrpaquet ilyashl jbhiatt idonaldson danmaclean Journal picks Chinnaiyan Lab
	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing [My Copy] Nature Methods, Vol. 4, No. 8. (11 June 2007), pp. 651-657. by Gordon Robertson, Martin Hirst, Matthew Bainbridge, et al.Misha Bilenky, Yongjun Zhao, Thomas Zeng, Ghia Euskirchen, Bridget Bernier, Richard Varhol, Allen Delaney, Nina Thiessen, Obi L. Griffith, Ann He, Marco Marra, Michael Snyder, Steven Jones posted to transcriptionfactor nextgen keypaper chipseq by stubrown on 2009-08-19 17:10:38 as along with 14 people and 1 group bedo absterga samanthacooper ewilban1 fpattyn polivares caseybrown guhjy vega kengg ghattem slevy03 dquest raiyar Plantandetc
	A census of human transcription factors: function, expression and evolution [My Copy] Nat Rev Genet, Vol. 10, No. 4. (April 2009), pp. 252-263. by Juan M. Vaquerizas, Sarah K. Kummerfeld, Sarah A. Teichmann, Nicholas M. Luscombe posted to evolution function gene-expression transcriptionfactor by marti on 2009-07-30 17:27:23 as along with 11 people PabloMarin absterga engelhardt lwaldron cassj daforerog druvus nuin oannes megraw idonaldson
	Expressing the human genome. [My Copy] Nature, Vol. 409, No. 6822. (15 February 2001), pp. 832-833. by R. Tupler, G. Perini, M. R. Green posted to gene-expression transcriptionfactor by marti on 2009-07-30 17:26:49 as along with 2 people balicea hplatero
	Computational prediction of transcription-factor binding site locations [My Copy] Genome Biology, Vol. 5, No. 1. (2003), 201. by Martha Bulyk posted to binding prediction transcriptionfactor by marti on 2009-07-15 14:35:39 as along with 9 people and 1 group Baschl tkmaia kaarsinogen lusk Stew nklee yevishere xili03 aalibes EisenLab
	Extracting transcription factor targets from ChIP-Seq data [My Copy] Nucl. Acids Res., Vol. 37, No. 17. (1 September 2009), e113. by Geetu Tuteja, Peter White, Jonathan Schug, Klaus H. Kaestner posted to chip-seq transcriptionfactor by AlexBateman to the group Journal picks on 2009-06-25 08:01:18 as along with 15 people and 3 groups hzoltan Vincent_Rouilly mfgreen ewilban1 idonaldson guhjy mkiyer rschulz fenghezi clearbluespring thegoose robeirne inesdesantiago malcook polivares Chinnaiyan Lab SIMR bioinformatics BergmanLab
	Assessing phylogenetic motif models for predicting transcription factor binding sites [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i339-347. by John Hawkins, Charles Grant, William S. Noble, Timothy L. Bailey posted to binding phylogeny transcriptionfactor by marti on 2009-06-17 11:56:32 as along with 9 people and 3 groups bsamal dquest Stew Lombardo_7 megraw operon nuin AlexBateman scjparker EisenLab Bioinformatics - CRUK Journal picks
	Concentration and Length Dependence of DNA Looping in Transcriptional Regulation [My Copy] PLoS ONE, Vol. 4, No. 5. (25 May 2009), e5621. by Lin Han, Hernan G. Garcia, Seth Blumberg, et al.Kevin B. Towles, John F. Beausang, Philip C. Nelson, Rob Phillips posted to transcriptionfactor by marti on 2009-06-09 11:31:05 as
	The transcription factor T-bet controls regulatory T cell homeostasis and function during type 1 inflammation. [My Copy] Nature immunology (3 May 2009) by Meghan A A. Koch, Glady's Tucker-Heard, Nikole R R. Perdue, Justin R R. Killebrew, Kevin B B. Urdahl, Daniel J J. Campbell posted to chemokine tbet transcriptionfactor treg by gbloeb on 2009-05-12 03:44:08 as along with 2 people ajaymalik leliavski
	Regulatory T-cell suppressor program co-opts transcription factor IRF4 to control TH2 responses [My Copy] Nature (01 February 2009) by Ye Zheng, Ashutosh Chaudhry, Arnold Kas, et al.Paul Deroos, Jeong M. Kim, Tin-Tin Chu, Lynn Corcoran, Piper Treuting, Ulf Klein, Alexander Y. Rudensky posted to transcriptionfactor treg by gbloeb on 2009-02-25 22:54:59 as along with 1 person ajaymalik
	Structure of the intact PPAR-[ggr]-RXR-[agr] nuclear receptor complex on DNA [My Copy] Nature (29 October 2008), pp. 350-356. by Vikas Chandra, Pengxiang Huang, Yoshitomo Hamuro, et al.Srilatha Raghuram, Yongjun Wang, Thomas P. Burris, Fraydoon Rastinejad posted to cooperation transcriptionfactor by marti on 2008-11-21 15:26:35 as along with 2 people yhkim anazhu
	POXO: a web-enabled tool series to discover transcription factor binding sites [My Copy] Nucleic Acids Res In Nucl. Acids Res., Vol. 34, No. suppl_2. (1 July 2006), pp. W534-540. by Matti Kankainen, Petri Pehkonen, Paivi Rosenstom, Petri Toronen, Garry Wong, Liisa Holm posted to binding transcriptionfactor by marti on 2008-10-22 15:52:31 as along with 2 people bsamal Terkko
	Inferring protein DNA dependencies using motif alignments and mutual information [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i297-304. by Shaun Mahony, Philip E. Auron, Panayiotis V. Benos posted to mutual-information transcriptionfactor by marti on 2008-08-26 17:30:10 as along with 1 person nklee
	Using transcription factor binding site co-occurrence to predict regulatory regions. [My Copy] Genome informatics. International Conference on Genome Informatics, Vol. 18 (2007), pp. 109-118. by H. Klein, M. Vingron posted to binding prediction transcriptionfactor by marti on 2008-08-07 15:19:52 as
	Born to bind: the BTB protein-protein interaction domain. [My Copy] BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 28, No. 12. (December 2006), pp. 1194-1202. by R. Perez-Torrado, D. Yamada, P. A. Defossez posted to binding interactions transcriptionfactor by marti on 2008-06-17 15:04:38 as
	FOXO-binding partners: it takes two to tango. [My Copy] Oncogene, Vol. 27, No. 16. (7 April 2008), pp. 2289-2299. by K. E. van der Vos, P. J. Coffer posted to binding transcriptionfactor by marti on 2008-06-17 15:03:34 as along with 1 person guhjy
	The biology of eukaryotic promoter prediction--a review. [My Copy] Computers & chemistry, Vol. 23, No. 3-4. (15 June 1999), pp. 191-207. by A. G. Pedersen, P. Baldi, Y. Chauvin, S. Brunak posted to prediction review transcriptionfactor by marti on 2008-06-17 15:01:42 as along with 2 people jmartin49 xiaobeizhao
	TRANSFAC retrieval program: a network model database of eukaryotic transcription regulating sequences and proteins. [My Copy] J Comput Biol, Vol. 1, No. 3. (1994), pp. 191-198. by R. Knüppel, P. Dietze, W. Lehnberg, K. Frech, E. Wingender posted to transcriptionfactor by marti on 2008-03-26 12:32:03 as
	The TRANSFAC system on gene expression regulation. [My Copy] Nucleic Acids Res, Vol. 29, No. 1. (1 January 2001), pp. 281-283. by E. Wingender, X. Chen, E. Fricke, et al.R. Geffers, R. Hehl, I. Liebich, M. Krull, V. Matys, H. Michael, R. Ohnhäuser, M. Prüss, F. Schacherer, S. Thiele, S. Urbach posted to transcriptionfactor by marti on 2008-03-25 18:31:17 as along with 1 person Takayuki
	Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites [My Copy] PLoS Comput Biol, Vol. 3, No. 5. (11 May 2007), e90. by Timothy E. Reddy, Charles DeLisi, Boris E. Shakhnovich posted to interfaces prediction transcriptionfactor by marti on 2008-03-10 16:54:13 as along with 7 people and 1 group pradiptaray nklee aalibes dpollard medic0747 GustavoLacerda mircea EisenLab
	TRANSFAC: an integrated system for gene expression regulation. [My Copy] Nucleic Acids Res, Vol. 28, No. 1. (1 January 2000), pp. 316-319. by E. Wingender, X. Chen, R. Hehl, et al.H. Karas, I. Liebich, V. Matys, T. Meinhardt, M. Prüss, I. Reuter, F. Schacherer posted to transcriptionfactor by marti on 2008-03-07 12:03:37 as along with 1 person gpalidwor
	Automatic transcription factor classifier based on functional domain composition. [My Copy] Biochem Biophys Res Commun, Vol. 347, No. 1. (18 August 2006), pp. 141-144. by Z. Qian, Y. D. Cai, Y. Li posted to interfaces transcriptionfactor by marti on 2008-03-07 12:03:18 as along with 1 person druvus
	TRANSFAC: transcriptional regulation, from patterns to profiles. [My Copy] Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 374-378. by V. Matys, E. Fricke, R. Geffers, et al.E. Gössling, M. Haubrock, R. Hehl, K. Hornischer, D. Karas, A. E. Kel, O. V. Kel-Margoulis, D. U. Kloos, S. Land, B. Lewicki-Potapov, H. Michael, R. Münch, I. Reuter, S. Rotert, H. Saxel, M. Scheer, S. Thiele, E. Wingender posted to transcriptionfactor by marti on 2008-03-07 12:00:41 as along with 8 people and 1 group raylim aprasad aalibes setar chad_davis GustavoLacerda Auger kmdaily Dead 60's

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binding	6
chipseq	4
nextgen	4
prediction	4
review	4
bioinformatics	2
gene-expression	2
interfaces	2
treg	2
chemokine	1
chip-seq	1
cooperation	1
evolution	1
function	1
histone	1
interactions	1
keypaper	1
motif	1
mutual-information	1
phylogeny	1
rnaseq	1
software	1
tbet	1
transcriptome	1

Tag transcriptionfactor [26 articles] Export

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