Tag transcriptome [at least 200 articles] Export

Recent papers classified by the tag transcriptome.

	The emerging role of splicing factors in cancer. [My Copy] EMBO reports, Vol. 9, No. 11. (31 November 2008), pp. 1087-1093. by Ana Rita R. Grosso, Sandra Martins, Maria Carmo-Fonseca posted to variants transcripts transcriptome regulatory_networks global_sequence dynamic_repertoire complexity cancer_development by burak on 2009-11-25 23:35:18 as
	Genome-wide reprogramming of regulatory networks, transport, cell wall and membrane biogenesis during arbuscular mycorrhizal symbiosis in <i>Lotus japonicus</i> [My Copy] New Phytologist, Vol. 182, No. 1. (2009), pp. 200-212. by Mike Guether, Raffaella Balestrini, Matthew Hannah, Ji He, Michael K. Udvardi, Paola Bonfante posted to transcriptome lotus amf by maren on 2009-11-24 04:27:05 as
	Computation for ChIP-seq and RNA-seq studies. [My Copy] Nature methods, Vol. 6, No. 11 Suppl. (15 November 2009), pp. S22-S32. by Shirley Pepke, Barbara Wold, Ali Mortazavi posted to transcriptome statistics rna methods epigenetics chipseq-project bioinformatics annotation by epigenetics to the group molnet-macs on 2009-11-18 13:35:59 as along with 23 people and 1 group urgi Jporci pst timflutre molnet-mna Vincent_Rouilly guhjy cajunsushi mpizbioinfo stubrown hzoltan robertrentzsch xingxu oannes74 tonamswish inesdesantiago Baschl polivares jwfoley druvus GeeSharpMinor chvlyl heliopais Orengo Group Journal Picks
	High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R101. by Arun Ramani, Andrew Nelson, Philipp Kapranov, Ian Bell, Thomas Gingeras, Andrew Fraser posted to worm transcriptome nmd development by cajunsushi on 2009-11-17 00:57:27 as along with 1 group Journal picks
	An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer [My Copy] Nature Biotechnology, Vol. 27, No. 11. (01 November 2009), pp. 1005-1011. by Xiao-Song Wang, John R. Prensner, Guoan Chen, et al.Qi Cao, Bo Han, Saravana M. Dhanasekaran, Rakesh Ponnala, Xuhong Cao, Sooryanarayana Varambally, Dafydd G. Thomas, Thomas J. Giordano, David G. Beer, Nallasivam Palanisamy, Maureen A. Sartor, Gilbert S. Omenn, Arul M. Chinnaiyan posted to transcriptome sequencing paired-end gene fusion cancer by torfinnnome on 2009-11-09 12:26:59 as along with 3 people and 1 group qayub chvlyl frohike Journal picks
	DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. [My Copy] Bioinformatics (Oxford, England) (24 October 2009), btp612. by Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xuegong Zhang posted to transcriptome seq rnaseq rna by ramonvidal on 2009-11-08 11:53:15 as along with 7 people hzoltan jmeppley heliopais GeeSharpMinor juokcho natstreet druvus
	RNA-Seq: a revolutionary tool for transcriptomics. [My Copy] Nature reviews. Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to transcriptome rna_seq by maren on 2009-11-06 23:20:46 as along with 41 people and 1 group hongkeun_park ngehlenborg hzoltan sandfire jwfoley urgi RNA-protein cthachuk heliopais GustavoLacerda rdiaz TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto burak natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor CUBES
	De novo transcriptome assembly with ABySS [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2872-2877. by Inanc Birol, Shaun D. Jackman, Cydney B. Nielsen, et al.Jenny Q. Qian, Richard Varhol, Greg Stazyk, Ryan D. Morin, Yongjun Zhao, Martin Hirst, Jacqueline E. Schein, Doug E. Horsman, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra, Steven J. M. Jones posted to transcriptome rna-seq novo de assembly by dswan on 2009-11-06 17:21:55 as along with 9 people dakelley torfinnnome TRHvidsten rtogawa ramonvidal stubrown darshan GustavoLacerda druvus
	Adaptation of Human CD4+ T Cells to Pathophysiological Hypoxia: A Transcriptome Analysis. [My Copy] The Journal of rheumatology (2 November 2009) by Timo Gaber, Thomas Häupl, Grit Sandig, et al.Karolina Tykwinska, Monique Fangradt, Miriam Tschirschmann, Martin Hahne, René Dziurla, Kerem Erekul, Martin Lautenbach, Paula Kolar, Gerd-Rüdiger R. Burmester, Frank Buttgereit posted to transcriptome to t pathophysiological of hypoxia human cells cd4 analysis adaptation a by StemCellWorkstation on 2009-11-04 22:24:25 as
	Cell wall biogenesis of Arabidopsis thaliana elongating cells: transcriptomics complements proteomics [My Copy] BMC Genomics, Vol. 10, No. 1. (31 October 2009), 505. by Elisabeth Jamet, David Roujol, Helene San Clemente, et al.Muhammad Irshad, Ludivine S. Taconnat, Jean P. Renou, Rafael P. Lezica posted to transcriptome proteomics plants dataset cell_wall by venancio on 2009-11-03 17:56:29 as
	Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 6. (10 February 2009), pp. 1886-1891. by Qi Zhao, Otavia L. Caballero, Samuel Levy, et al.Brian J. Stevenson, Christian Iseli, Sandro J. de Souza, Pedro A. Galante, Dana Busam, Margaret A. Leversha, Kalyani Chadalavada, Yu-Hui Rogers, J. Craig Venter, Andrew J. G. Simpson, Robert L. Strausberg posted to translocation transcriptome somatic_mutations rnaseq nextgen mutations cancer by stubrown on 2009-11-03 15:56:06 as along with 2 people n00c xingxu
	Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 809-813. by Sohrab P. Shah, Ryan D. Morin, Jaswinder Khattra, et al.Leah Prentice, Trevor Pugh, Angela Burleigh, Allen Delaney, Karen Gelmon, Ryan Guliany, Janine Senz, Christian Steidl, Robert A. Holt, Steven Jones, Mark Sun, Gillian Leung, Richard Moore, Tesa Severson, Greg A. Taylor, Andrew E. Teschendorff, Kane Tse, Gulisa Turashvili, Richard Varhol, René L. Warren, Peter Watson, Yongjun Zhao, Carlos Caldas, David Huntsman, Martin Hirst, Marco A. Marra, Samuel Aparicio posted to whole-genome-seq transcriptome somatic_mutations rnaseq nextgen mutations cancer by stubrown on 2009-11-02 14:16:53 as along with 13 people and 2 groups misonneh pst jwfoley chvlyl giovenko frohike brianb Zephyrus jsuchit mkiyer torfinnnome merpublic djkt Chinnaiyan Lab Journal picks
	Comparative Transcriptional and Genomic Analysis of Plasmodium falciparum Field Isolates [My Copy] PLoS Pathog, Vol. 5, No. 10. (30 October 2009), e1000644. by Margaret J. Mackinnon, Jinguang Li, Sachel Mok, et al.Moses M. Kortok, Kevin Marsh, Peter R. Preiser, Zbynek Bozdech posted to transcriptome malaria by GeeSharpMinor on 2009-10-30 15:55:09 as along with 1 person kshameer
	A global view of the nonprotein-coding transcriptome in Plasmodium falciparum [My Copy] Nucl. Acids Res. (28 October 2009), gkp895. by Carsten A. Raabe, Cecilia P. Sanchez, Gerrit Randau, et al.Thomas Robeck, Boris V. Skryabin, Suresh V. Chinni, Michael Kube, Richard Reinhardt, Guey H. Ng, Ravichandran Manickam, Vladimir Y. Kuryshev, Michael Lanzer, Juergen Brosius, Thean H. Tang, Timofey S. Rozhdestvensky posted to transcriptome pathogen malaria by AlexBateman to the group Journal picks on 2009-10-29 09:41:40 as along with 1 person GeeSharpMinor
	Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts. [My Copy] Genome biology, Vol. 10, No. 10. (16 October 2009), R115. by Joshua Z. Levin, Michael F. Berger, Xian Adiconis, et al.Peter Rogov, Alexandre Melnikov, Timothy Fennell, Chad Nusbaum, Levi A. Garraway, Andreas Gnirke posted to transcriptome cancer by pareng to the group Journal picks on 2009-10-24 10:31:04 as along with 3 people pst jwfoley torfinnnome
	Quantification of the yeast transcriptome by single-molecule sequencing [My Copy] Nat Biotech, Vol. 27, No. 7. (July 2009), pp. 652-658. by Doron Lipson, Tal Raz, Alix Kieu, et al.Daniel R. Jones, Eldar Giladi, Edward Thayer, John F. Thompson, Stan Letovsky, Patrice Milos, Marie Causey posted to yeast transcriptome by venancio on 2009-10-23 23:40:13 as along with 9 people pmalkus roys psique xingxu guhjy scjparker shikin fenghezi neils
	Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 482. by Bryan Jensen, Dhileep Sivam, Charles Kifer, Peter Myler, Marilyn Parsons posted to trypanosomes transcriptome microarrays dataset by venancio on 2009-10-23 22:57:42 as
	Analysis of Schistosoma mansoni genes shared with Deuterostomia and with possible roles in host interactions [My Copy] BMC Genomics, Vol. 8, No. 1. (08 November 2007), 407. by Thiago Venancio, Ricardo DeMarco, Giulliana Almeida, Katia Oliveira, Joao Setubal, Sergio V. Almeida posted to transcriptome schistosomes mypapers evolution deuterostomes by venancio on 2009-10-23 18:53:20 as
	The Aedes aegypti larval transcriptome: a comparative perspective with emphasis on trypsins and the domain structure of peritrophins. [My Copy] Insect molecular biology (28 November 2008) by T M M. Venancio, P T T. Cristofoletti, C Ferreira, S Verjovski-Almeida, W R R. Terra posted to transcriptome mypapers insects by venancio on 2009-10-23 18:51:12 as along with 1 person operon
	Functional organization of the transcriptome in human brain [My Copy] Nature Neuroscience, Vol. 11, No. 11. (12 October 2008), pp. 1271-1282. by Michael C. Oldham, Genevieve Konopka, Kazuya Iwamoto, et al.Peter Langfelder, Tadafumi Kato, Steve Horvath, Daniel H. Geschwind posted to transcriptome transcription regulation neurogenesis human by cassj to the group KCL & UCL Bioinformatics on 2009-10-23 10:24:45 as along with 8 people burak jeremymiller daforerog druvus balicea dubhelix isimpson psique
	Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing [My Copy] Nature Genetics, Vol. 40, No. 12. (02 November 2008), pp. 1413-1415. by Qun Pan, Ofer Shai, Leo J. Lee, Brendan J. Frey, Benjamin J. Blencowe posted to transcriptome splicing sequencing illumina alternative by torfinnnome on 2009-10-22 15:16:38 as along with 20 people hzoltan n00c ericrpaquet jonilaserson ThomasDOtto giovanni frohike fenghezi jfr zxmon21 jmcq poschm wimufi xingxu inesdesantiago jbhiatt rschulz djkt dchughes GeeSharpMinor
	Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 219. by Eli Meyer, Galina Aglyamova, Shi Wang, et al.Jade B. Carter, David Abrego, John Colbourne, Bette Willis, Mikhail Matz posted to transcriptome ngs 454 by orzenil on 2009-10-17 03:39:44 as along with 5 people and 1 group mlog jonilaserson stajich Thaverkamp idoerg Mycology
	Establishing legitimacy and function in the new transcriptome [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 6. (1 November 2009), pp. 424-436. by Harm van Bakel, Timothy R. Hughes posted to transcriptome legitimacy by ppgardne to the group Journal picks on 2009-10-16 13:03:12 as
	Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 221. by Joshua Bloom, Zia Khan, Leonid Kruglyak, Mona Singh, Amy Caudy posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:47:00 as along with 9 people and 1 group hzoltan heliopais GeeSharpMinor n00c TRHvidsten natstreet druvus dswan neils Bioinformatics
	Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. [My Copy] Nucleic acids research, Vol. 36, No. 21. (1 December 2008), e141. by Peter A. 't Hoen, Yavuz Ariyurek, Helene H. Thygesen, et al.Erno Vreugdenhil, Rolf H. Vossen, Renée X. de Menezes, Judith M. Boer, Gert-Jan J. van Ommen, Johan T. den Dunnen posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:45:25 as along with 25 people manduca hzoltan stubrown GeeSharpMinor n00c guhjy hcoller daed poschm stsaft azazello jfr slevy03 felsani usagi-kirin shikin coela cthachuk ojabado caseybrown abizar natstreet druvus rschulz pengchy
	Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 9. (3 March 2009), pp. 3264-3269. by Moran Yassour, Tommy Kaplan, Hunter B. Fraser, et al.Joshua Z. Levin, Jenna Pfiffner, Xian Adiconis, Gary Schroth, Shujun Luo, Irina Khrebtukova, Andreas Gnirke, Chad Nusbaum, Dawn-Anne Thompson, Nir Friedman, Aviv Regev posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:34:16 as along with 8 people and 1 group hzoltan fstrozzi stubrown jfr stajich GeeSharpMinor jmcq provero Mycology
	Is sequencing enlightenment ending the dark age of the transcriptome? [My Copy] Nature Methods, Vol. 6, No. 10. (01 October 2009), pp. 711-713. by Piero Carninci posted to transcriptome sequencing rna-seq by n00c on 2009-10-13 20:22:23 as along with 5 people inesdesantiago heliopais druvus megraw maren
	Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 257-263. by Ido Amit, Manuel Garber, Nicolas Chevrier, et al.Ana P. Leite, Yoni Donner, Thomas Eisenhaure, Mitchell Guttman, Jennifer K. Grenier, Weibo Li, Or Zuk, Lisa A. Schubert, Brian Birditt, Tal Shay, Alon Goren, Xiaolan Zhang, Zachary Smith, Raquel Deering, Rebecca C. McDonald, Moran Cabili, Bradley E. Bernstein, John L. Rinn, Alex Meissner, David E. Root, Nir Hacohen, Aviv Regev posted to transcriptome transcription systems_biology infectionhost-pathogen_interaction gene_expression by leliavski on 2009-10-09 19:52:15 as along with 9 people xianjun inesdesantiago TRHvidsten agonzale gbloeb roys ptrobajo natgoodman tmmurali
	The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing [My Copy] Science, Vol. 320, No. 5881. (6 June 2008), pp. 1344-1349. by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, et al.Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder posted to transcriptome ngs by GustavoLacerda on 2009-10-08 21:39:34 as along with 24 people and 1 group hzoltan bartjacobse debasis dbensasson cfvillalta rdowell poschm jmcq waszak michaelbarton djkt urgi stajich semrich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack guhjy shurjo Mycology
	Annotating genomes with massive-scale RNA sequencing. [My Copy] Genome biology, Vol. 9, No. 12. (2008), R175. by France Denoeud, Jean-Marc M. Aury, Corinne Da Silva, et al.Benjamin Noel, Odile Rogier, Massimo Delledonne, Michele Morgante, Giorgio Valle, Patrick Wincker, Claude Scarpelli, Olivier Jaillon, François Artiguenave posted to transcriptome ngs by GustavoLacerda on 2009-10-08 21:22:18 as along with 20 people and 1 group hzoltan cthachuk jamselem n00c jonilaserson ghattem nlapalu jmcq dandaman abizar dakelley inesdesantiago mhamada pengchy balicea fhalbrit GeeSharpMinor natstreet druvus neils SIMR bioinformatics
	Benchmarking Next-Generation Transcriptome Sequencing for Functional and Evolutionary Genomics [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2731-2744. by John G. Gibbons, Eric M. Janson, Chris T. Hittinger, Mark Johnston, Patrick Abbot, Antonis Rokas posted to transcriptome ngs assembly by GustavoLacerda on 2009-10-08 21:05:32 as along with 7 people and 1 group djkt mlog kiekyon biomcgary stajich natstreet druvus Mycology
	Elicitor-induced transcription factors for metabolic reprogramming of secondary metabolism in Medicago truncatula. [My Copy] BMC plant biology, Vol. 8 (22 December 2008), 132. by Marina A. Naoumkina, XianZhi He, Richard A. Dixon posted to yeast transcriptome medicago extract dixon defense 2009 by gaulin on 2009-10-08 12:54:51 as
	Integrated metabolite and transcript profiling identify a biosynthetic mechanism for hispidol in Medicago truncatula cell cultures. [My Copy] Plant physiology (1 July 2009) by Mohamed A. Farag, Bettina E. Deavours, Angelo de Fatima, Marina Naoumkina, Richard A. Dixon, Lloyd W. Sumner posted to yeast transcriptome medicago extract dixon 2009 by gaulin on 2009-10-08 12:50:41 as
	Integrative analysis of the cancer transcriptome [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S31-S37. by Daniel R. Rhodes, Arul M. Chinnaiyan posted to transcriptome microarray integrative cancer analysis by bertelsen on 2009-10-06 23:46:47 as along with 8 people and 2 groups daforerog cswinburne aalibes textoris ealloza shikin waghsk srp33 BioinfoCIPF GeneGo
	High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity [My Copy] BMC Genetics, Vol. 10, No. 1. (05 October 2009), 63. by Weiyin Zhou, Margaret Calciano, Heather Jordan, et al.Michael Brenner, Seth Johnson, Darong Wu, Lin Lei, Diego Pallares, Pascale Beurdeley, Fabien Rouet, Pritmohinder Gill, Laurent Bracco, Cyril Soucaille, Richard Einstein posted to transcriptome splicing microarray gwsa expression alternative by torfinnnome on 2009-10-06 10:12:48 as along with 1 person GeeSharpMinor
	Transcriptome-based determination of multiple transcription regulator activities in Escherichia coli by using network component analysis [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 2. (13 January 2004), pp. 641-646. by Katy C. Kao, Young-Lyeol Yang, Riccardo Boscolo, Chiara Sabatti, Vwani Roychowdhury, James C. Liao posted to transcriptome transcription regulators network factor-analysis component by bertelsen on 2009-10-04 16:51:37 as
	A thermodynamic model of transcriptome formation [My Copy] Nucl. Acids Res., Vol. 33, No. 20. (24 November 2005), pp. 6587-6592. by Tomokazu Konishi posted to transcriptome thermodynamic_model parametric_framework nucleotide_sequence microarray by mrkn on 2009-10-02 08:42:32 as
	Applications of new sequencing technologies for transcriptome analysis. [My Copy] Annual review of genomics and human genetics, Vol. 10, No. 1. (2009), pp. 135-151. by Olena Morozova, Martin Hirst, Marco A. Marra posted to transcriptome next_generation by usagi-kirin on 2009-10-01 22:01:58 as along with 3 people cthachuk heliopais scmelton
	The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains [My Copy] Science, Vol. 291, No. 5507. (16 February 2001), pp. 1289-1292. by Huib Caron, Barbera Schaik, Merlijn Mee, et al.Frank Baas, Gregory Riggins, Peter Sluis, Marie-Christine Hermus, Ronald Asperen, Kathy Boon, P. A. Voute, Siem Heisterkamp, Antoine Kampen, Rogier Versteeg posted to gastric-cancer-group transcriptome pioneering map human gene-expression clustering chromosomal-expression by bertelsen on 2009-09-30 17:40:12 as along with 3 people florador jpoyatos Garamonfok
	Many LINE1 elements contribute to the transcriptome of human somatic cells [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R100. by Sanjida Rangwala, Lili Zhang, Haig Kazazian posted to transposon transcriptome retroelement by operon on 2009-09-30 00:57:10 as along with 2 people djkt natalia_martins
	Comparison of next generation sequencing technologies for transcriptome characterization. [My Copy] BMC genomics, Vol. 10, No. 1. (1 August 2009), 347. by P. Kerr Wall, Jim Leebens-Mack, André S. Chanderbali, et al.Abdelali Barakat, Erik Wolcott, Haiying Liang, Lena Landherr, Lynn P. Tomsho, Yi Hu, John E. Carlson, Hong Ma, Stephan C. Schuster, Douglas E. Soltis, Pamela S. Soltis, Naomi Altman, Claude W. dePamphilis posted to transcriptome technology solid solexa rna-seq illumina comparison abi 454 by n00c on 2009-09-29 16:17:26 as along with 19 people and 4 groups hzoltan daveGerrard daforerog feeldead debasis jgill mqbphcw3 sotacam GustavoLacerda adamjamesreid dswan mlog gwallau ewilban1 ThomasDOtto jasontsai polivares natstreet druvus Journal picks Bioinformatics LabDros BergmanLab
	Direct RNA sequencing. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 814-818. by Fatih Ozsolak, Adam R. Platt, Dan R. Jones, et al.Jeffrey G. Reifenberger, Lauryn E. Sass, Peter McInerney, John F. Thompson, Jayson Bowers, Mirna Jarosz, Patrice M. Milos posted to transcriptome sequencing rna-seq rna direct-rna-seq by n00c on 2009-09-28 14:10:50 as along with 20 people and 2 groups pmalkus hzoltan manduca gotgenes jwfoley GeeSharpMinor mlc39 colinveal reyez TRHvidsten djkt ppgardne dchughes heliopais vingron nzm lp2 toni_marco dswan kinestetika Journal picks Bioinformatics - CRUK
	Comparative profiling of the transcriptional response to infection in two species of Drosophila by short-read cDNA sequencing. [My Copy] BMC genomics, Vol. 10, No. 1. (07 June 2009), 259. by Timothy B. Sackton, Andrew G. Clark posted to transcriptome short-read sequencing mosaik cdna by n00c on 2009-09-21 22:44:32 as along with 2 people and 1 group fsm avilella Journal picks
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to transcriptome sequencing rna-seq by bertelsen on 2009-09-20 23:04:10 as along with 42 people and 2 groups manduca cthachuk hzoltan jwfoley heliopais juokcho aktas debasis idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	Evidence for a network transcriptional control of promiscuous gene expression in medullary thymic epithelial cells [My Copy] Molecular Immunology (31 August 2009) by Cláudia Macedo, Adriane F. Evangelista, Danielle A. Magalhães, et al.Thaís A. Fornari, Leandra L. Linhares, Cristina M. Junta, Guilherme L. Silva, Elza T. Sakamoto-Hojo, Eduardo A. Donadi, Wilson Savino posted to transcriptome transcription thymus thymic_selection thymic_medulla thymic_epithelial_cells aire by leliavski on 2009-09-20 15:08:34 as
	Triplet repeat length bias and variation in the human transcriptome [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 40. (6 October 2009), pp. 17095-17100. by Michael Molla, Arthur Delcher, Shamil Sunyaev, Charles Cantor, Simon Kasif posted to transcriptome by bpcusack on 2009-09-18 19:01:48 as
	Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond [My Copy] Current Opinion in Plant Biology, Vol. 12, No. 2. (20 April 2009), pp. 107-118. by Ryan Lister, Brian D. Gregory, Joseph R. Ecker posted to transcriptome sequencing review omics genome by Vincent_Rouilly on 2009-09-16 12:16:33 as along with 4 people mlog debasis guhjy smiddha
	SNP discovery via 454 transcriptome sequencing. [My Copy] The Plant journal : for cell and molecular biology, Vol. 51, No. 5. (September 2007), pp. 910-918. by W. Brad Barbazuk, Scott J. Emrich, Hsin D. Chen, Li Li, Patrick S. Schnable posted to transcriptome snp-discovery sequencing polybayes 454 by n00c on 2009-09-13 09:20:20 as along with 5 people stubrown jlin orzenil guhjy natstreet
	The Arabidopsis Cold-Responsive Transcriptome and Its Regulation by ICE1 [My Copy] Plant Cell, Vol. 17, No. 11. (1 November 2005), pp. 3155-3175. by Byeong-ha Lee, David A. Henderson, Jian-Kang Zhu posted to transcriptome froid by FabienneGranier on 2009-09-10 14:05:18 as
	From gene expression to gene regulatory networks in Arabidopsis thaliana [My Copy] BMC Systems Biology, Vol. 3, No. 1. (3 September 2009), 85. by Chris Needham, Iain Manfield, Andrew Bulpitt, Philip Gilmartin, David Westhead posted to transcriptome systems networks gene by danmaclean on 2009-09-09 15:24:07 as along with 9 people idonaldson pengchy Borelli ptrobajo TRHvidsten rmk barriot natstreet druvus

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transcription	46
microarray	42
sequencing	40
genomique	39
puces_adn	37
malaria	36
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rna-seq	32
genome	29
human	28
ncrna	28
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est	16
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mouse	13
tiling	13
454	11
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antisense	10
evolution	10
tissue-specific	10
arabidopsis	9
biology	9
illumina	9
rnaseq	9
splicing	9
alternative	8
assembly	8
dna	8
nextgen	8
regulation	8
tez	8
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expression-profiling	7
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map	7
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plasmodium	7
solexa	7
solid	7
stem_cells	7
analyse	6
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array	6
gene_expression	6
integrative	6
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software	6
transcriptional-regulation	6
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eqtl	5
exon	5
function	5
genetics	5
genome-wide	5
mrna	5
postgenomics	5
sage	5
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sequence	5
short-read	5
adipose	4
alternative-splicing	4
carninci	4
comparative_study	4
comparison	4
component	4
database	4
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drosophila	4
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intron	4
liver	4
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mammals	4
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protein	4
testis	4
tss	4
unread	4
cerebellum	3
lymph-node	3
mb435	3
mrna-profiling	3
noncoding	3
organization	3
paired-end	3
profiling	3

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