Tag transposons [80 articles] Export

Recent papers classified by the tag transposons.

	Characterization of novel reverse transcriptase encoding human endogenous retroviral sequences similar to type A and type B retroviruses: differential transcription in normal human tissues. [My Copy] J. Virol., Vol. 67, No. 11. (1 November 1993), pp. 6778-6787. by P. Medstrand, J. Blomberg posted to transposons by gregoryross on 2009-11-04 11:45:11 as
	Transposable elements as drivers of genomic and biological diversity in vertebrates [My Copy] Chromosome Research, Vol. 16, No. 1. (1 March 2008), pp. 203-215. by Astrid Böhne, Frédéric Brunet, Delphine Galiana-Arnoux, Christina Schultheis, Jean-Nicolas Volff posted to transposons by gregoryross on 2009-11-02 15:53:26 as along with 2 people and 1 group dchughes idonaldson BergmanLab
	Combined Evidence Annotation of Transposable Elements in Genome Sequences [My Copy] PLoS Comput Biol, Vol. 1, No. 2. (29 July 2005), e22. by Hadi Quesneville, Casey M. Bergman, Olivier Andrieu, et al.Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere posted to transposons by GustavoLacerda on 2009-10-08 21:20:30 as along with 12 people and 2 groups orzenil natstreet treangen operon briann aprasad dpollard timflutre stajich urgi yoanjacquemin ArtemPankin LabDros EisenLab
	Telomere-associated endonuclease-deficient Penelope-like retroelements in diverse eukaryotes [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 22. (29 May 2007), pp. 9352-9357. by Eugene A. Gladyshev, Irina R. Arkhipova posted to transposons penelope by dandaman on 2009-10-06 08:20:58 as along with 2 people operon mblwhoi
	The highest-copy repeats are methylated in the small genome of the early divergent vascular plant Selaginella moellendorffii. [My Copy] BMC genomics, Vol. 9 (12 June 2008), 282. by Agnes P. Chan, Admasu Melake-Berhan, Kimberly O'Brien, et al.Stephanie Buckley, Hui Quan, Dan Chen, Matthew Lewis, Jo Ann A. Banks, Pablo D. Rabinowicz posted to transposons selaginella repeat genome by dandaman on 2009-10-01 07:18:35 as
	TARGeT: a web-based pipeline for retrieving and characterizing gene and transposable element families from genomic sequences [My Copy] Nucl. Acids Res., Vol. 37, No. 11. (1 June 2009), pp. e78-e78. by Yujun Han, James M. Burnette, Susan R. Wessler posted to transposons software selection phylogenetics mutation evolution bioinformatics by operon on 2009-09-27 14:50:34 as
	The impact of retrotransposons on human genome evolution [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (01 October 2009), pp. 691-703. by Richard Cordaux, Mark A. Batzer posted to transposons by Annab on 2009-09-18 18:32:13 as along with 4 people and 1 group docv dakelley fenghezi qayub Journal picks
	Mobile elements create structural variation: Analysis of a complete human genome [My Copy] Genome Research, Vol. 19, No. 9. (13 September 2009), pp. 1516-1526. by Jinchuan Xing, Yuhua Zhang, Kyudong Han, et al.Abdel H. Salem, Shurjo K. Sen, Chad D. Huff, Qiong Zhou, Ewen F. Kirkness, Samuel Levy, Mark A. Batzer, Lynn B. Jorde posted to transposons structural human by APRegier on 2009-09-02 16:45:11 as along with 9 people and 1 group n00c djkt sameersoi dchughes fenghezi jandot Dulcinea natstreet JustinCrocker Journal picks
	Transposable elements in Coffea (Gentianales: Rubiacea) transcripts and their role in the origin of protein diversity in flowering plants [My Copy] Molecular Genetics and Genomics, Vol. 279, No. 4. (1 April 2008), pp. 385-401. by Fabrício Lopes, Marcelo Carazzolle, Gonçalo Pereira, Carlos Colombo, Claudia Carareto posted to lge transposons by GustavoLacerda on 2009-08-21 15:58:35 as along with 4 people and 1 group ramonvidal natstreet cisevol kiara BergmanLab
	The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis. [My Copy] Gene, Vol. 441, No. 1-2. (15 July 2009), pp. 111-118. by Oliver Piskurek, Hidenori Nishihara, Norihiro Okada posted to transposons snake lizard by GustavoLacerda on 2009-08-13 16:01:46 as along with 1 person operon
	A Functional Role for Transposases in a Large Eukaryotic Genome [My Copy] Science, Vol. 324, No. 5929. (15 May 2009), pp. 935-938. by Mariusz Nowacki, Brian P. Higgins, Genevieve M. Maquilan, Estienne C. Swart, Thomas G. Doak, Laura F. Landweber posted to transposons by GustavoLacerda on 2009-08-04 18:07:53 as along with 8 people and 1 group operon orzenil gwallau gdb mhiromi yves_cite leliavski stajich Mycology
	Activation of plant retrotransposons under stress conditions [My Copy] Trends in Plant Science, Vol. 3, No. 5. (1 May 1998), pp. 181-187. by M. Grandbastien posted to plant_stress transposons by orzenil on 2009-08-04 02:33:33 as
	PIF- and Pong-Like Transposable Elements: Distribution, Evolution and Relationship With Tourist-Like Miniature Inverted-Repeat Transposable Elements [My Copy] Genetics, Vol. 166, No. 2. (1 February 2004), pp. 971-986. by Xiaoyu Zhang, Ning Jiang, Cedric Feschotte, Susan R. Wessler posted to mite pif pong transposons by ArtemPankin to the group Khavkin's lab on 2009-08-03 18:37:52 as along with 1 person operon
	Members of a Large Retroposon Family Are Determinants of Post-Transcriptional Gene Expression in <italic>Leishmania</italic> [My Copy] PLoS Pathog, Vol. 3, No. 9. (28 September 2007), e136. by Frédéric Bringaud, Michaela Müller, Gustavo C. Cerqueira, et al.Martin Smith, Annie Rochette, Najib M. A. El-Sayed, Barbara Papadopoulou, Elodie Ghedin posted to transposon_effects transposons by orzenil on 2009-07-23 16:41:38 as along with 1 person and 1 group dpollard EisenLab
	Organization and evolution of two SIDER retroposon subfamilies and their impact on the Leishmania genome. [My Copy] BMC genomics, Vol. 10, No. 1. (22 May 2009), 240. by M. Smith, F. Bringaud, B. Papadopoulou posted to transposons by orzenil on 2009-07-23 15:51:57 as along with 1 person jlncdr
	The protist Trichomonas vaginalis harbors multiple lineages of transcriptionally active Mutator-like elements [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 330. by Fabricio Lopes, Joana Silva, Marlene Benchimol, Gustavo Costa, Goncalo Pereira, Claudia Carareto posted to lge transposons by GustavoLacerda on 2009-07-21 15:33:39 as
	Plant Transposable Elements. A Hard Act to Follow [My Copy] Plant Physiol., Vol. 125, No. 1. (1 January 2001), pp. 149-151. by Susan R. Wessler posted to te_display transposons by orzenil on 2009-07-20 20:46:52 as
	The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes. [My Copy] Plant methods, Vol. 5, No. 1. (2009), 8. by James C. Estill, Jeffrey L. Bennetzen posted to bioinformatics software transposons by orzenil on 2009-07-17 20:04:13 as along with 3 people operon druvus natstreet
	Conjugative transposons: an unusual and diverse set of integrated gene transfer elements [My Copy] Microbiol. Rev., Vol. 59, No. 4. (1 December 1995), pp. 579-590. by A. A. Salyers, N. B. Shoemaker, A. M. Stevens, L. Y. Li posted to conjugative transposons by katholt on 2009-07-17 14:46:15 as
	Plasmid encoded antibiotic resistance: acquisition and transfer of antibiotic resistance genes in bacteria [My Copy] British Journal of Pharmacology, Vol. 153, No. S1. (March 2008), pp. S347-S357. by P. M. Bennett posted to elements genetic integrons mobile resistance transposons by katholt on 2009-07-17 14:40:10 as
	MOBILE GENETIC ELEMENTS: THE AGENTS OF OPEN SOURCE EVOLUTION [My Copy] Nat Rev Micro, Vol. 3, No. 9. (2005), pp. 722-732. by Laura S. Frost, Raphael Leplae, Anne O. Summers, Ariane Toussaint posted to genome_evolution transposons by orzenil on 2009-07-13 15:42:20 as along with 4 people rec3141 dakelley cdallett karfunkel
	The regulated retrotransposon transcriptome of mammalian cells [My Copy] Nature Genetics, Vol. 41, No. 5. (19 April 2009), pp. 563-571. by Geoffrey J. Faulkner, Yasumasa Kimura, Carsten O. Daub, et al.Shivangi Wani, Charles Plessy, Katharine M. Irvine, Kate Schroder, Nicole Cloonan, Anita L. Steptoe, Timo Lassmann, Kazunori Waki, Nadine Hornig, Takahiro Arakawa, Hazuki Takahashi, Jun Kawai, Alistair R. R. Forrest, Harukazu Suzuki, Yoshihide Hayashizaki, David A. Hume, Valerio Orlando, Sean M. Grimmond, Piero Carninci posted to regulation transposons by gdb on 2009-07-11 17:30:27 as along with 13 people and 2 groups inesdesantiago guhjy galka8_diploma tonamswish renatomilani cisevol robfsouza dchughes mtagaya fenghezi jbhiatt natstreet antonkratz cis-regulatory-evolution BergmanLab
	The Take and Give Between Retrotransposable Elements and their Hosts [My Copy] Annual Review of Genetics, Vol. 42, No. 1. (2008), pp. 587-617. by Arthur Beauregard, M. Joan Curcio, Marlene Belfort posted to transposons by gdb on 2009-07-11 16:44:44 as along with 4 people jrhill tonamswish cambray timflutre
	Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila [My Copy] Vol. 128, No. 6. (23 March 2007), pp. 1089-1103. by Julius Brennecke, Alexei A. Aravin, Alexander Stark, et al.Monica Dus, Manolis Kellis, Ravi Sachidanandam, Gregory J. Hannon posted to microrna transposons by gdb on 2009-07-11 16:29:33 as
	An epigenetic role for maternally inherited piRNAs in transposon silencing. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5906. (28 November 2008), pp. 1387-1392. by Julius Brennecke, Colin D. Malone, Alexei A. Aravin, Ravi Sachidanandam, Alexander Stark, Gregory J. Hannon posted to epigenetics pirna transposons by galka8_diploma on 2009-07-05 18:28:36 as along with 7 people and 2 groups bpcusack operon guhjy coela songpku jbhiatt gfliustu Roswell Cancer Crosstalk R.E.A.D
	Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes [My Copy] Genome Biology, Vol. 10, No. 2. (18 February 2009), R22. by Carolina Bartolome, Xabier Bello, Xulio Maside posted to drosophilidae transposable_element transposons tripunctata_radiation by lizbiogen on 2009-06-24 22:25:52 as along with 4 people and 1 group operon gwallau biomcgary timflutre BergmanLab
	Characterization of incompatibility group HI1 plasmids from Salmonella typhi by restriction endonuclease digestion and hybridization of DNA probes for Tn3, Tn9, and Tn10. [My Copy] Canadian journal of microbiology, Vol. 31, No. 8. (August 1985), pp. 721-729. by D. E. Taylor, E. C. Brose posted to inchi1 plasmid resistance transposons typhi by katholt on 2009-06-20 17:50:22 as
	Microbial co-habitation and lateral gene transfer: what transposases can tell us [My Copy] Genome Biology, Vol. 10 (24 April 2009), R45. by Sean, Nikos C. Kyrpides posted to habitat horizontal-gene-transfer microbial-ecology transposons by jmeppley on 2009-04-27 15:08:20 as along with 1 person and 1 group Thaverkamp Microbial-Ecology
	Why do human diversity levels vary at a megabase scale? [My Copy] Genome Res, Vol. 15, No. 9. (September 2005), pp. 1222-1231. by I. Hellmann, K. Prüfer, H. Ji, M. C. Zody, S. Pääbo, S. E. Ptak posted to genome mammals mutation_rate transposons by hdopazo on 2009-04-13 12:32:18 as along with 1 person aprasad
	The Functional Role of Pack-MULEs in Rice Inferred from Purifying Selection and Expression Profile [My Copy] Plant Cell, Vol. 21, No. 1. (1 January 2009), pp. 25-38. by Kousuke Hanada, Veronica Vallejo, Kan Nobuta, et al.R. Keith Slotkin, Damon Lisch, Blake C. Meyers, Shin-Han Shiu, Ning Jiang posted to pack-mule transposons by dandaman on 2009-03-05 11:07:45 as along with 2 people operon timflutre
	DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs [My Copy] Nucl. Acids Res., Vol. 33, No. 7. (14 April 2005), pp. 2153-2165. by Cedric Feschotte, Mark T. Osterlund, Ryan Peeler, Susan R. Wessler posted to transposons by rjlawren on 2009-03-03 19:17:58 as along with 1 person operon
	A Rice Tc1/Mariner-Like Element Transposes in Yeast [My Copy] Plant Cell, Vol. 18, No. 10. (1 October 2006), pp. 2469-2478. by Guojun Yang, Clifford F. Weil, Susan R. Wessler posted to transposons by rjlawren on 2009-03-03 18:47:42 as along with 1 person operon
	The LTR retrotransposon micropia in the cardini group of Drosophila (Diptera: Drosophilidae): a possible case of horizontal transfer [My Copy] Genetica, Vol. 134, No. 3. (1 November 2008), pp. 335-344. by Juliana Cordeiro, Lizandra Robe, Élgion Loreto, Vera Valente posted to micropia nossos transposons by lizbiogen on 2009-02-05 18:27:27 as along with 2 people gwallau jlncdr
	Transposable elements as genomic diseases [My Copy] Mol. BioSyst., Vol. 5, No. 1. (January 2009), pp. 32-35. by Andreas Wagner posted to genetics transposons by pkm on 2009-01-26 14:39:54 as along with 2 people timflutre operon
	Cooperation is Fleeting in the World of Transposable Elements [My Copy] PLoS Computational Biology, Vol. 2, No. 12. (1 December 2006), e162. by Andreas Wagner posted to genetics transposons by pkm on 2009-01-26 14:38:44 as along with 2 people timflutre joshuashen
	Mariner-like transposases are widespread and diverse in flowering plants [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 1. (January 2002), pp. 280-285. by Cédric Feschotte, Susan R. Wessler posted to transposons by rjlawren on 2009-01-20 21:05:55 as
	An Arabidopsis hAT-like transposase is essential for plant development [My Copy] Nature, Vol. 436, No. 7048., pp. 282-284. by Paul Bundock, Paul Hooykaas posted to transposons by rjlawren on 2009-01-14 22:21:24 as along with 4 people dfs700 saru timflutre urgi
	Biochemical characterization of a SET and transposase fusion protein, Metnase: its DNA binding and DNA cleavage activity. [My Copy] Biochemistry, Vol. 46, No. 40. (9 October 2007), pp. 11369-11376. by Y. Roman, M. Oshige, Y. J. Lee, et al.K. Goodwin, M. M. Georgiadis, R. A. Hromas, S. H. Lee posted to set transposons by rjlawren on 2009-01-14 16:41:51 as
	The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair. [My Copy] Proc Natl Acad Sci U S A, Vol. 102 (2005), pp. 18075-18080. by S. H. Lee, M. Oshige, S. T. Durant, et al.K. K. Rasila, E. A. Williamson, H. Ramsey, L. Kwan, J. A. Nickoloff, R. Hromas posted to set transposons by rjlawren on 2009-01-14 16:38:02 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Diversity and structure of PIF/Harbinger-like elements in the genome of Medicago truncatula [My Copy] BMC Genomics, Vol. 8 (09 November 2007), 409. by Dariusz Grzebelus, Slawomir Lasota, Tomasz Gambin, Gregory Kucherov, Anna Gambin posted to transposons by rjlawren on 2008-12-16 17:52:30 as
	What prevents transposable elements from taking over the genome? A commentary on 'A test for the role of natural selection in the stabilization of transposable element copy number in a population of Drosophila melanogaster' by Elizabeth Montgomery, Brian Charlesworth and Charles H. Langley. [My Copy] Genetical research, Vol. 89, No. 5-6. (December 2007), pp. 433-434. by T. F. Mackay posted to transposons by imtechnology on 2008-12-04 21:56:48 as along with 2 people gwallau operon
	Evaluating the protein coding potential of exonized transposable element sequences [My Copy] Biology Direct, Vol. 2 (26 November 2007), 31. by Jittima Piriyapongsa, Mark T. Rutledge, Sanil Patel, Mark Borodovsky, King I. Jordan posted to transposons by GustavoLacerda on 2008-11-20 03:50:55 as along with 2 people and 1 group cisevol wenhan BergmanLab
	Using Genetic Algorithms with Asexual Transposition [My Copy] In Proceedings of the Genetic and Evolutionary Computation Conference (GECCO'00 (2000), pp. 323-330. by Anabela Simões, Ernesto Costa posted to evolution evolutionary-computation genetic-algorithms transposable-elements transposition transposons by mcphee on 2008-10-27 05:34:40 as
	Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae. [My Copy] Cytogenet Genome Res, Vol. 110, No. 1-4. (2005), pp. 229-241. by M. A. Grandbastien, C. Audeon, E. Bonnivard, et al.J. M. Casacuberta, B. Chalhoub, A. P. Costa, Q. H. Le, D. Melayah, M. Petit, C. Poncet, S. M. Tam, M. A. Van Sluys, C. Mhiri posted to stress transposons by dandaman on 2008-09-23 10:15:56 as along with 1 person ArtemPankin
	Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation. [My Copy] PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007) by Joti Giordano, Yongchao Ge, Yevgeniy Gelfand, György Abrusán, Gary Benson, Peter E E. Warburton posted to evolutionary transposons by kiara on 2008-09-02 15:32:54 as along with 7 people and 3 groups aprasad dchughes sebastien_vigneau N0131826 paulcartwright yoanjacquemin PetrovLab G4ID Genetics-of-Gambling BergmanLab
	Determination of the entire sequence of turtle CR1: the first open reading frame of the turtle CR1 element encodes a protein with a novel zinc finger motif. [My Copy] Molecular biology and evolution, Vol. 14, No. 12. (December 1997), pp. 1206-1217. by M. Kajikawa, K. Ohshima, N. Okada posted to snake transposons by kiara on 2008-08-26 20:26:48 as
	The lepidopteran transposon vector, piggyBac, mediates germ-line transformation in the Mediterranean fruit fly. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 13. (23 June 1998), pp. 7520-7525. by A. M. Handler, S. D. McCombs, M. J. Fraser, S. H. Saul posted to tephritid transposons by brant on 2008-06-11 19:47:53 as
	Medfly transposable elements: diversity, evolution, genomic impact and possible applications. [My Copy] Insect biochemistry and molecular biology, Vol. 34, No. 2. (February 2004), pp. 139-148. by L. M. Gomulski, C. Torti, V. Murelli, M. Bonizzoni, G. Gasperi, A. R. Malacrida posted to tephritid transposons by brant on 2008-06-11 19:46:22 as along with 1 person operon
	Efficient algorithms and software for detection of full-length LTR retrotransposons. [My Copy] J Bioinform Comput Biol, Vol. 4, No. 2. (April 2006), pp. 197-216. by A. Kalyanaraman, S. Aluru posted to assembly transposons by dmc on 2008-03-07 13:55:51 as along with 1 person yoanjacquemin
	A novel genome-scale repeat finder geared towards transposons [My Copy] Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 468-476. by Xuehui Li, Tamer Kahveci, A. Mark Settles posted to genomics repeat transposons by GustavoLacerda on 2008-02-14 18:21:02 as along with 3 people and 1 group timflutre operon idonaldson BergmanLab

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evolution	10
genetics	9
transposable-elements	5
cnpq_transposon	4
genome	4
mammals	4
mite	4
review	4
biology	3
genomics	3
mutation_rate	3
ncrna	3
bioinformatics	2
evolutionary-computation	2
lge	2
lines	2
ltr	2
pif	2
pong	2
repeat	2
resistance	2
set	2
small_rnas	2
snake	2
software	2
speciation	2
structural	2
tephritid	2
transcriptome	2
assembly	1
cnv	1
conjugative	1
cryptons	1
dna	1
dna_structure	1
drosophila	1
drosophilidae	1
duplicate-genes	1
duplication	1
elements	1
epigenetics	1
eukaryote	1
evolutionary	1
gene-regulation	1
genetic	1
genetic-algorithms	1
genetic-programming	1
genome_evolution	1
genomes	1
grammar	1
habitat	1
horizontal-gene-transfer	1
human	1
huref	1
inchi1	1
integrons	1
lizard	1
microbial-ecology	1
micropia	1
microrna	1
mirna	1
mobile	1
mobile-elements	1
mobile_elements	1
modular_redesign	1
mutation	1
neutralism	1
new-genes	1
nossos	1
pack-mule	1
penelope	1
phylogenetics	1
pirna	1
plant_stress	1
plasmid	1
protein_engineering	1
regulation	1
retrotransposons	1
reverse-transcription	1
selaginella	1
selection	1
seminal	1
sines	1
stress	1
sv	1
te	1
te_display	1
tns	1
transcription	1
transposable_element	1
transposition	1
transposon_effects	1
tripunctata_radiation	1
typhi	1
vertebrates	1

Tag transposons [80 articles] Export

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