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	Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups [My Copy] Cladistics, Vol. 25, No. 3. (2009), pp. 211-230. by Pablo A. Goloboff, Santiago A. Catalano, J. Marcos Mirande, et al.Claudia A. Szumik, J. Salvador Arias, Mari Källersjö, James S. Farris posted to tree supertree supermatrix phylogenomics phylogenetics by aprasad on 2009-11-20 20:43:07 as
	Quantitative analysis of pulmonary airway tree structures [My Copy] Computers in Biology and Medicine, Vol. 36, No. 9. (September 2006), pp. 974-996. by K. Palagyi, J. Tschirren, E. Hoffman, M. Sonka posted to tree skeletonization quantitative_analysis graph by laistler on 2009-11-17 13:20:54 as
	Analysis of attachment models for directory and file trees [My Copy] Physica D: Nonlinear Phenomena, Vol. 224, No. 1-2. (December 2006), pp. 149-155. by K. Klemm, V. Eguíluz, M. San Miguel posted to tree network hierarchy allometric_scaling by tessonec on 2009-11-09 14:10:39 as
	Scaling in the Structure of Directory Trees in a Computer Cluster [My Copy] Physical Review Letters, Vol. 95, No. 12. (Sep 2005), 128701. by Konstantin Klemm, Víctor M. Eguíluz, Maxi San Miguel posted to tree network hierarchy allometric_scaling by tessonec on 2009-11-09 14:07:41 as
	A multi-objective genetic programming approach to developing Pareto optimal decision trees [My Copy] Decision Support Systems In Integrated Decision Support, Vol. 43, No. 3. (April 2007), pp. 809-826. by H. Zhao posted to tree pareto maths decision_tree_techniques by matatk on 2009-11-07 15:50:20 as along with 2 people brownstudy sventura
	A Novel Approach to Phylogeny Reconstruction from Protein Sequences [My Copy] Journal of Molecular Evolution, Vol. 48, No. 3. (24 March 1999), pp. 264-273. by Nick V. Grishin posted to tree these evolution by calderonv on 2009-11-05 16:41:00 as
	SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics [My Copy] BMC Evolutionary Biology, Vol. 7, No. Suppl 1. (2007) by Beatrice Roure, Naiara R. Ezpeleta, Herve Philippe posted to tree these software phylogeny by calderonv on 2009-11-05 16:34:41 as along with 7 people treangen natstreet druvus operon aprasad akifumi dmp
	Missing data and the design of phylogenetic analyses [My Copy] Journal of Biomedical Informatics In Phylogenetic Inferencing: Beyond Biology, Vol. 39, No. 1. (February 2006), pp. 34-42. by John J. Wiens posted to tree these phylogeny by calderonv on 2009-11-05 16:32:58 as along with 2 people and 1 group skembel aprasad iSEEM
	SHOT: a web server for the construction of genome phylogenies [My Copy] Trends in Genetics, Vol. 18, No. 3. (01 March 2002), pp. 158-162. by J. Korbel, B. Snel, M. Huynen, P. Bork posted to tree these phylogeny metho by calderonv on 2009-11-05 16:04:06 as along with 1 person maximilianh
	A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. [My Copy] Molecular Biology and Evolution, Vol. 18, No. 5. (1 May 2001), pp. 691-699. by S. Whelan, N. Goldman posted to tree these phylogeny maximum-likelihood by calderonv on 2009-11-05 15:58:29 as along with 7 people BioNica michaelbarton bpb chrn ssgong gjuggler gisle
	Automated Phylogenetic Detection of Recombination Using a Genetic Algorithm [My Copy] Mol Biol Evol, Vol. 23, No. 10. (1 October 2006), pp. 1891-1901. by Sergei L. Kosakovsky Pond, David Posada, Michael B. Gravenor, Christopher H. Woelk, Simon D. W. Frost posted to tree these recombination phylogenetic by calderonv on 2009-11-05 15:54:47 as along with 5 people druvus operon Natasha Garamonfok larbiza
	The challenge of constructing large phylogenetic trees. [My Copy] Trends Plant Sci, Vol. 8, No. 8. (August 2003), pp. 374-379. by M. J. Sanderson, A. C. Driskell posted to tree these phylogeny by calderonv on 2009-11-05 13:45:39 as along with 1 person and 1 group rvosa FAB-lab
	Matrix Representation of Trees, Redundancy, and Weighting [My Copy] Systematic Biology, Vol. 45, No. 2. (1996), pp. 247-253. by Fredrik Ronquist posted to tree these phylogeny matrix_representation by calderonv on 2009-11-05 13:44:19 as
	Comparison of phylogenetic trees [My Copy] Mathematical Biosciences, Vol. 53, No. 1-2. (February 1981), pp. 131-147. by D. F. Robinson, L. R. Foulds posted to tree these phylogeny by calderonv on 2009-11-05 13:42:15 as along with 6 people lianping druvus alexeid jmeppley balicea blindAngle
	A Modification to Baum and Ragan's Method for Combining Phylogenetic Trees [My Copy] Systematic Biology, Vol. 44, No. 2. (1995), pp. 251-255. by Andy Purvis posted to tree these phylogeny by calderonv on 2009-11-05 13:38:24 as
	Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 96, No. 8. (13 April 1999), pp. 4285-4288. by Matteo Pellegrini, Edward M. Marcotte, Michael J. Thompson, David Eisenberg, Todd O. Yeates posted to tree these profile phylogeny evolution by calderonv on 2009-11-05 13:31:52 as along with 15 people and 1 group jperkins pablocarb chica skembel Robinder dragonrez bicko lfriedl balajis opheliav tny ruvido winterschlaefer shung carlk kdl
	Modeling the evolution of protein domain architectures using maximum parsimony. [My Copy] Journal of molecular biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315. by Jessica H. Fong, Lewis Y. Geer, Anna R. Panchenko, Stephen H. Bryant posted to tree these phylogeny evolution domain by calderonv on 2009-11-05 13:29:44 as along with 9 people and 3 groups martainn wiedenhoeft jameswasmuth icases marcius tny choonpeng redelings zwang BioinfoCIPF SGU-CIPF TNT
	Domain tree-based analysis of protein architecture evolution. [My Copy] Molecular biology and evolution, Vol. 25, No. 2. (1 February 2008), pp. 254-264. by Kristoffer Forslund, Anna Henricson, Volker Hollich, Erik L. Sonnhammer posted to tree these evolution domain by calderonv on 2009-11-05 13:26:14 as along with 5 people martainn jameswasmuth cjeans vinithepooh gulkur
	Phylogenetic Analysis Under Dollo's Law [My Copy] Systematic Zoology, Vol. 26, No. 1. (1977), pp. 77-88. by James S. Farris posted to tree these phylogeny by calderonv on 2009-11-05 13:24:21 as
	The supermatrix approach to systematics [My Copy] Trends in Ecology & Evolution, Vol. 22, No. 1. (January 2007), pp. 34-41. by A. Dequeiroz, J. Gatesy posted to tree these supermatrix phylogeny by calderonv on 2009-11-05 11:44:41 as along with 4 people and 3 groups inquil druvus skembel dchughes iSEEM G4ID Genetics-of-Gambling
	Phylogenomics and the reconstruction of the tree of life [My Copy] Nature Reviews Genetics, Vol. 6, No. 5. (01 May 2005), pp. 361-375. by Frederic Delsuc, Henner Brinkmann, Herve Philippe posted to tree these phylogeny by calderonv on 2009-11-05 11:43:13 as along with 11 people pablocarb stharward adampah michaelbarton treangen fhsantanna druvus maximilianh cmzmasek gjuggler dmc
	Balancing confidentiality and efficiency in untrusted relational DBMSs [My Copy] In CCS '03: Proceedings of the 10th ACM conference on Computer and communications security (2003), pp. 93-102. by Ernesto Damiani, De Capitani Vimercati, Sushil Jajodia, Stefano Paraboschi, Pierangela Samarati posted to tree index hash encrypted database daas ccs b 2003 by kawamoto on 2009-11-03 14:21:41 as along with 3 people and 1 group lilith H-Arrietaumn dexter_shen 8_01
	A simple algorithm to infer gene duplication and speciation events on a gene tree [My Copy] Bioinformatics, Vol. 17, No. 9. (1 September 2001), pp. 821-828. by Christian M. Zmasek, Sean R. Eddy posted to tree these phylogenetic forester by calderonv on 2009-11-02 09:56:10 as along with 2 people cmzmasek stajich
	When to use splay trees [My Copy] Software: Practice and Experience, Vol. 37, No. 15., pp. 1559-1575. by Eric K. Lee, Charles U. Martel posted to tree structure splay-tree binary-tree by seb1 on 2009-11-01 19:27:51 as
	Logics for Unranked Trees: An Overview [My Copy] CoRR, Vol. abs/cs/0606062 (2006) by Leonid Libkin posted to unranked tree by sgwyj on 2009-10-16 10:38:55 as
	Functional classification of genome-scale metabolic networks. [My Copy] EURASIP journal on bioinformatics & systems biology (2009) by Oliver Ebenhöh, Thomas Handorf posted to tree metabolic_networks by pablocarb on 2009-10-15 17:37:43 as
	On the minimum delay peer-to-peer video streaming: how realtime can it be? [My Copy] In MULTIMEDIA '07: Proceedings of the 15th international conference on Multimedia (2007), pp. 127-136. by Yong Liu posted to tree p2p multiple-tree modelling delay by zhenwei on 2009-10-13 03:24:24 as
	Worst-case analysis for region and partial region searches in multidimensional binary search trees and balanced quad trees [My Copy] Acta Informatica, Vol. 9, No. 1. (1 March 1977), pp. 23-29. by D. T. Lee, C. K. Wong posted to tree nearest-neighbour kd-tree by ansobol on 2009-10-12 09:13:02 as
	Clustering with shallow trees [My Copy] (5 Oct 2009) by M. Bailly-Bechet, S. Bradde, A. Braunstein, A. Flaxman, L. Foini, R. Zecchina posted to tree message_passing hierarchical_lattice hierarchical_clustering clustering by marinari on 2009-10-06 14:57:58 as
	GENOME TREES AND THE NATURE OF GENOME EVOLUTION [My Copy] Annual Review of Microbiology, Vol. 59, No. 1. (2005), pp. 191-209. by Berend Snel, Martijn A. Huynen, Bas E. Dutilh posted to tree-of-life tree reconstruction phylogenetic_reconstruction genome evolution by pablocarb on 2009-10-06 08:40:14 as along with 5 people inquil ssgong knaseanka aprasad dayjm
	RAPD markers demonstrate genetic diversity in Pterocarpus angolensis from Zimbabwe and Zambia [My Copy] Southern Forests: a Journal of Forest Science (April 2009), pp. 63-70. by E. Chisha-Kasumu, S. Woodward, A. Price posted to tree rapd diversity by nuttpo on 2009-10-05 13:34:24 as
	RAPD and morphological diversity among four populations of the tropical tree species Paramichelia baillonii (Pierre) Hu in China [My Copy] Forest Ecology and Management, Vol. 255, No. 5-6. (05 April 2008), pp. 1793-1801. by Fagen Li, Siming Gan, Qijie Weng, et al.Xia Zhao, Shineng Huang, Mei Li, Shaoyu Chen, Qinghua Wang, Fuqiang Shi posted to tree rapd diversity by nuttpo on 2009-10-05 13:34:08 as
	Ontology-Driven Induction of Decision Trees at Multiple Levels of Abstraction [My Copy] Abstraction, Reformulation, and Approximation (2002), 316. by Jun Zhang, Adrian Silvescu, Vasant Honavar posted to tree ontology by nmsx on 2009-10-02 08:38:29 as along with 3 people education03 jrcoffi Cavadini
	Functional Pearl: The Zipper [My Copy] J. Functional Programming, Vol. 7 (1997), pp. 7-5. by Gérard Huet, Inria R. France posted to tree programming haskell functional article by jjrohal on 2009-09-27 19:51:47 as
	Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 1. (1 January 2007), pp. 127-128. by Ivica Letunic, Peer Bork posted to tree-of-life tree by pablocarb on 2009-09-24 17:38:02 as along with 6 people and 2 groups aramata guhjy marcius skhadar hpaces gjuggler BioinfoCIPF SGU-CIPF
	q-Gram Matching Using Tree Models [My Copy] IEEE Transactions on Knowledge and Data Engineering, Vol. 18, No. 4. (2006), pp. 433-447. by Prahlad Fogla, Wenke Lee posted to tree string-matching sliding-window q-gram pruning indexing data-structure algorithm by n00c on 2009-09-23 23:03:57 as
	The Tree of Life: A Phylogenetic Classification (Harvard University Press Reference Library) [My Copy] (15 January 2007) by Guillaume Lecointre, HervÃ© Le Guyader posted to tree phylogenetic life classification by nuttpo on 2009-09-22 06:39:15 as
	Networks, Trees, and Treeshrews: Assessing Support and Identifying Conflict with Multiple Loci and a Problematic Root [My Copy] Syst Biol (16 June 2009), syp025. by Trina E. Roberts, Eric J. Sargis, Link E. Olson posted to tree_shrew tree primate phylogenetics model_choice by aprasad on 2009-09-21 22:22:12 as
	A Modica-Mortola approximation for branched transport [My Copy] (16 Sep 2009) by Filippo Santambrogio posted to tree transport 1d by ansobol to the group OTARIE on 2009-09-18 09:10:27 as
	Immunological analysis of allergenic cross-reactivity between peanut and tree nuts [My Copy] Clinical & Experimental Allergy, Vol. 33, No. 9. (2003), pp. 1273-1280. by M. P. de Leon, I. N. Glaspole, A. C. Drew, J. M. Rolland, R. E. O'Hehir, C. Suphioglu posted to tree reactivity peanut nut cross allergy by klm734 on 2009-09-15 06:19:24 as
	Fast algorithms for large-scale genome alignment and comparison [My Copy] Nucl. Acids Res., Vol. 30, No. 11. (1 June 2002), pp. 2478-2483. by Arthur L. Delcher, Adam Phillippy, Jane Carlton, Steven L. Salzberg posted to tree mummer genome data-structure alignment algorithm by n00c on 2009-09-14 16:22:58 as along with 6 people umit treangen urgi yoanjacquemin bozdagd Neeperando
	apTreeshape: statistical analysis of phylogenetic tree shape [My Copy] Bioinformatics, Vol. 22, No. 3. (1 February 2006), pp. 363-364. by Nicolas Bortolussi, Eric Durand, Michael Blum, Olivier Francois posted to tree by seanyuan on 2009-09-07 16:51:13 as
	Which Random Processes Describe the Tree of Life? A Large-Scale Study of Phylogenetic Tree Imbalance [My Copy] Syst Biol, Vol. 55, No. 4. (1 August 2006), pp. 685-691. by Michael G. B. Blum, Olivier Francois posted to tree by seanyuan on 2009-09-07 16:47:50 as
	Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology [My Copy] Science, Vol. 294, No. 5550. (14 December 2001), pp. 2310-2314. by John P. Huelsenbeck, Fredrik Ronquist, Rasmus Nielsen, Jonathan P. Bollback posted to tree by seanyuan on 2009-09-02 22:38:44 as along with 9 people and 1 group operon nuin aprasad madhurjyag renewang bourscheid eustatic tny spavey FAB-lab
	Phylogeny of the Ferungulata (Mammalia: Laurasiatheria) as determined from phylogenomic data. [My Copy] Molecular phylogenetics and evolution, Vol. 52, No. 3. (10 September 2009), pp. 660-664. by Zhuo-Cheng C. Hou, Roberto Romero, Derek E. Wildman posted to whole_genome tree phylogenomics phylogenetics mammal laurasiatheria coding by aprasad on 2009-09-02 19:24:58 as along with 1 person and 1 group avilella Ensembl Compara citations
	Noise-Tolerant Occam Algorithms and Their Applications to Learning Decision Trees [My Copy] Machine Learning, Vol. 11, No. 1. (1 April 1993), pp. 37-62. by Yasubumi Sakakibara posted to tree noise label decision by sancho on 2009-09-01 04:52:04 as
	Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. [My Copy] Human mutation, Vol. 30, No. 2. (February 2009) by Mannis van Oven, Manfred Kayser posted to tree phylogeny mtdna by Archaeogenetics on 2009-08-28 05:36:24 as along with 1 person mkotlyar
	Quantifying cancer progression with conjunctive Bayesian networks [My Copy] Bioinformatics (19 August 2009), btp505. by Moritz Gerstung, Michael Baudis, Holger Moch, Niko Beerenwinkel posted to tree oncogenetic network bayesian by rdiaz on 2009-08-21 11:47:13 as
	Foliar water uptake: a common water acquisition strategy for plants of the redwood forest [My Copy] Oecologia, Vol. 161, No. 3. (1 September 2009), pp. 449-459. by Emily Limm, Kevin Simonin, Aron Bothman, Todd Dawson posted to water-uptake tree forest drought by roodubh on 2009-08-19 12:01:56 as
	Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 31. (4 August 2009), pp. 12826-12831. by Guohong A. Wu, Se-Ran Jun, Gregory E. Sims, Sung-Hou Kim posted to virus tree phylogenetics method dna by robfsouza on 2009-08-11 17:07:54 as along with 3 people and 1 group druvus friendpine skembel iSEEM

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phylogenetics	102
mammal	59
graph	47
phylogeny	46
algorithm	43
network	38
multicast	34
evolution	31
decision	24
phylogenomics	23
routing	22
alignment	21
primate	20
p2p	19
random	17
these	17
3d	16
life	15
ad-hoc	14
spanning-tree	14
suffix	14
classification	13
database	13
distance	13
rare_genomic_characters	13
reconstruction	13
review	13
virtualplant	13
accuracy	12
clustering	12
phylogenetic	12
search	12
bioinformatics	11
have_as_pdf	11
methods	11
model	11
platyrrhini	11
root_eutheria	11
steiner	11
structure	11
time	11
visualization	11
modelling	10
probability	10
random-tree	10
simulation	10
urban	10
bat	9
combinatorics	9
data-structure	9
index	9
of	9
random-walk	9
smt	9
spanning	9
algorithms	8
data	8
detection	8
matching	8
metric-space	8
mining	8
plantgl	8
regression	8
transposon	8
water	8
analysis	7
forest	7
growth	7
manet	7
markov	7
mathematics	7
mesh	7
networks	7
reliable	7
thesis	7
xml	7
0print	6
2d	6
c45	6
consensus	6
edit	6
graphic	6
hierarchy	6
induction	6
infovis	6
logic	6
morphology	6
multiple	6
pattern	6
programming	6
random-graph	6
similarity	6
survey	6
transport	6
trees	6
wireless	6
segmentation	5
streaming	5
theory	5
walnut	5

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