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Abstract
Protein-protein interactions (PPIs) are the basis of biological functions. Knowledge of the interactions of a protein can help understand its molecular function and its association with different biological processes and pathways. Several publicly available databases provide comprehensive information about individual proteins, such as their sequence, structure, and function. There also exist databases that are built exclusively to provide PPIs by curating them from published literature. ...
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Proceedings - International Conference on Software Engineering (2009), pp. 36-46
Abstract
The absence of a disciplined approach for capturing and managing architectural knowledge causes the loss of substantial knowledge generated during the software architecture process. This paper describes the use of a Spatial Hypertext Wiki (ShyWiki) as a tool for Architectural Knowledge Management (AKM) support. Specifically, we demonstrate that ShyWiki can be used for implementing lightweight knowledge sharing workspaces, which includes AKM tools, decision support facilities, and activity awareness features. We also describe how distributed stakeholders involved in the software architecting process ...
Note (first note only)
Art. No.: 5069995
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Abstract
We investigated the collaborative writing actions carried out by 60 Open University of Israel graduate students as they built a wiki glossary of key course concepts. These actions were analysed using a taxonomy of collaborative writing actions (i.e. adding, editing and deleting information) in order to find out what students do and what they do not do when writing collaboratively. Two main findings were reported: in accord with previous research, students most frequently add content to a wiki rather than delete ...
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Information Research, Vol. 15, No. 3. (2010), pp. 28-28
Abstract
Wikipedia es una enciclopedia libre y abierta de colaboración en línea basado en una herramienta de escritura colaborativa llamada Wiki y las tres políticas fundamentales que guían el desarrollo de Wikipedia son: el "punto de vista neutral", "ninguna investigación original" y "verificabilidad". En general, los artículos de Wikipedia son de una calidad comparable a la de una enciclopedia impresa, aunque la calidad de los artículos individuales varía de baja a alta, esto depende en gran medida de los contribuyentes individuales. A ...
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posted to avian biodiversity flu maps wiki
by klauso
on 2013-02-11 13:35:44
Abstract
The purpose of the Flu Wiki is to help local communities prepare for and perhaps cope with a possible influenza pandemic. This is a task previously ceded to local, state and national governmental public health agencies. Our goal is to be: ...
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posted to career jobs scientific wiki
by klauso
on 2013-02-11 13:35:39
Abstract
Wiki-Portal für Promotion, Habilitation und Juniorprofessur ...
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posted to connotea wiki
by idoiaalcorta
on 2013-02-04 16:43:59
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posted to connotea wiki
by idoiaalcorta
on 2013-02-04 16:43:53
Abstract
Diapositivas ...
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posted to connotea wiki
by idoiaalcorta
on 2013-02-04 16:40:46
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posted to connotea wiki
by idoiaalcorta
on 2013-02-04 16:40:25
Abstract
Diapositivas ...
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Abstract
Semantic MediaWiki is an extension of MediaWiki – a widely used wiki-engine that also powers Wikipedia. Its aim is to make semantic technologies available to a broad community by smoothly integrating them with the established usage of MediaWiki. The software is already used on a number of productive installations world-wide, but the main target remains to establish Semantic Wikipedia as an early adopter of semantic technologies on the web. Thus usability and scalability are as important as powerful semantic ...
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: The Semantic Web - ISWC 2006 In The Semantic Web - ISWC 2006, Vol. 4273 (2006), pp. 935-942, doi:10.1007/11926078_68
Abstract
Semantic MediaWiki is an extension of MediaWiki – a widely used wiki-engine that also powers Wikipedia. Its aim is to make semantic technologies available to a broad community by smoothly integrating them with the established usage of MediaWiki. The software is already used on a number of productive installations world-wide, but the main target remains to establish Semantic Wikipedia as an early adopter of semantic technologies on the web. Thus usability and scalability are as important as powerful semantic ...
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posted to health wiki
by jepcastel
on 2013-02-01 08:05:16
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posted to e-learning wiki
by jepcastel
on 2013-02-01 08:05:15
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posted to wiki
by univerself
on 2013-01-26 10:43:00
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posted to mcb oscillator wiki
by paulmcl
on 2013-01-21 15:42:47
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posted to wiki
by mandr
on 2013-01-18 11:43:42
Note (first note only)
10.1038/455022a
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posted to wiki
by mandr
on 2013-01-18 11:43:42
Note (first note only)
10.1038/455022a
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posted to wiki
by mandr
on 2013-01-18 11:43:42
Note (first note only)
10.1038/455022a
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posted to wiki
by mandr
on 2013-01-18 11:43:13
Note (first note only)
10.1038/442744c
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posted to wiki
by mandr
on 2013-01-18 11:43:13
Note (first note only)
10.1038/442744c
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posted to wiki
by mandr
on 2013-01-18 11:43:10
Note (first note only)
10.1038/441678a
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posted to wiki
by mandr
on 2013-01-18 11:43:10
Note (first note only)
10.1038/441678a
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posted to connotea plagiarism wiki writing
by suribe
on 2013-01-17 18:53:54
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posted to connotea portal science wiki
by suribe
on 2013-01-17 18:53:51
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Abstract
This paper introduces CL-ESA, a new multilingual retrieval model for the analysis of cross-language similarity. The retrieval model exploits the multilingual alignment of Wikipedia: given a document d written in language L we construct a concept vector d for d, where each dimension i in d quantifies the similarity of d with respect to a document ...
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Abstract
A survey of 168 corporate wiki users was conducted. Findings indicate that corporate wikis appear to be sustainable. Users stated three main types of benefits from corporate wikis: enhanced reputation, work made easier, and helping the organization to improve its processes. These benefits were seen as more likely when the wiki was used for tasks requiring novel solutions and the information posted was from credible sources. Users acknowledged making a variety of contributions, which suggests that they could be categorized as ...
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Journal of Consumer Health on the Internet, Vol. 12, No. 4. (2008), pp. 317-326
Abstract
Utilizing Web 2.0 technologies such as blogs, wikis, and social networking sites can provide innovative and creative means to communicate with library patrons. They can also serve as a purposeful information repository for individuals looking for information on a particular topic. A pain management resource for cancer patients and their caregivers was created to provide a concise "one-slop" location for this community to access the latest and most reliable consumer health information regarding this topic. The process of planning, organizing, building, ...
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(2008)
Abstract
Semantic wikis enhance normal wikis with typed links. Every link on a semantic wiki page has a type describing the relation of the current page to the target of the link. In this paper we propose an architecture that can be used to validate the user input and consistency of typed links in the input with the existing knowledge base. The validation of the consistency is done by utilising a reasoner component embedded in the architecture. ...
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by Jie Wang, Jiali Zhuang, Sowmya Iyer, et al.Xin-Ying Lin, Melissa C. Greven, Bong-Hyun Kim, Jill Moore, Brian G. Pierce, Xianjun Dong, Daniel Virgil, Ewan Birney, Jui-Hung Hung, Zhiping Weng
Abstract
The Encyclopedia of DNA Elements (ENCODE) consortium aims to identify all functional elements in the human genome including transcripts, transcriptional regulatory regions, along with their chromatin states and DNA methylation patterns. The ENCODE project generates data utilizing a variety of techniques that can enrich for regulatory regions, such as chromatin immunoprecipitation (ChIP), micrococcal nuclease (MNase) digestion and DNase I digestion, followed by deeply sequencing the resulting DNA. As part of the ENCODE project, we have developed a Web-accessible repository accessible at ...
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The 5th International Semantic Web Conference (ISWC 2006) In International Semantic Web Conference, Vol. 4273 (2006), pp. 736-749
Abstract
We present OntoWiki, a tool providing support for agile, distributed knowledge engineering scenarios. OntoWiki facilitates the visual presentation of a knowledge base as an information map, with different views on instance data. It enables intuitive authoring of semantic content, with an inline editing mode for editing RDF content, similar to WYSIWYG for text documents. It fosters social collaboration aspects by keeping track of changes, allowing to comment and discuss every single part of a knowledge base, enabling to rate and measure ...
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posted to database sensor sensornetwork wiki
by koitaroh
on 2012-10-20 20:28:49
Abstract
This paper presents a new methodology for collaborative sensor data management known as WikiSensing. It is a novel approach that incorporates online collaboration with sensor data management. We introduce the work on this research by describing the motivation and challenges of designing and developing an online collaborative sensor data management system. This is followed by a brief survey on popular sensor data management and online collaborative systems. We then present the architecture for WikiSensing highlighting its main components and features. Several ...
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In HYPERTEXT '02: Proceedings of the thirteenth ACM conference on Hypertext and hypermedia (2002), pp. 149-149, doi:10.1145/513338.513342
Abstract
Although most theory and research in the hypertext community has been directed toward systems and implementations with fairly conventional patterns of authorship, hypertext as it has evolved on the Internet contains a number of stranger species: Web logs (or "blogs") that consist largely of citations or pointers to other Web content; reader-writeable text spaces sometimes called "Wikis"; and in spaces outside the Web, shared writing environments like MUDs and MOOs. This panel brings together several writer/designers who have experience in one ...
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(04 January 2008)
Abstract
The success of Wikipedia has proven just how effective wikis can be for collaborative editing on a large scale-larger than anyone originally thought possible. This book shows you how to install, use, manage, and extend a wiki using MediaWiki-the wiki engine used to power Wikipedia. As each chapter builds on previous ones, tasks involving wikis progress from simple to those of increasing complexity and evolve from theory to case study. You'll learn wiki terminology and how to create user accounts and new pages, use wiki links, and find ...
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First Monday, Vol. 17, No. 9. (3 September 2012)
posted to education wiki wikipedia
by AJCann
on 2012-09-04 13:25:08
Abstract
Just a few years ago Wikipedia was seen as a barbarian invading the ivory tower. Now, an increasing number of academics recognize that it can be used as an effective teaching tool. The following paper is divided into two parts. It beings with a discussion of the advantages of using Wikipedia as a teaching tool, an activity that goes beyond a simple addition to the teaching repertoire, and allows contributing to our society through service learning and ...
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Abstract
The number of discovered genetic variants from genome-wide association (GWA) studies (GWAS) has been growing rapidly. Centralized efforts such as the National Human Genome Research Institute's GWAS catalog provide regular updates and a convenient interface for quick lookup. However, the catalog entries are manually curated and rely on data from published articles. Other tools such as SNPedia (http://www.snpedia.com) collect published results regarding functional consequences of ...
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Abstract
SUMMARY: In recent years, the number of knowledge bases developed using Wiki technology has exploded. Unfortunately, next to their numerous advantages, classical Wikis present a critical limitation: the invaluable knowledge they gather is represented as free text, which hinders their computational exploitation. This is in sharp contrast with the current practice for biological databases where the data is made available in a structured way. Here, we present WikiOpener an extension for the classical MediaWiki engine that augments Wiki pages by allowing ...
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Nucleic acids research, Vol. 40, No. Database issue. (01 January 2012), pp. D1255-D1261, doi:10.1093/nar/gkr925
Abstract
The Gene Wiki is an open-access and openly editable collection of Wikipedia articles about human genes. Initiated in 2008, it has grown to include articles about more than 10,000 genes that, collectively, contain more than 1.4 million words of gene-centric text with extensive citations back to the primary scientific literature. This growing body of useful, gene-centric content is the result of the work of thousands ...
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posted to history web wiki
by nailest
on 2012-07-27 16:58:01
Note (first note only)
10.1016/j.oooo.2012.03.002
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posted to analysis public-health software wiki
by nailest
on 2012-07-27 16:04:26
Abstract
Active patient and public involvement as partners in their own health care and in the development of health services is key to achieving a health care system that is responsive to patients' needs and values. It promotes better use of the health care system, and improves health outcomes, quality of life and patient satisfaction. By involving patients and health care professionals as partners in the creation and updating of patient health support tools, wikis--highly accessible, interactive vehicles of communication--have the potential ...
Note (first note only)
10.2196/jmir.1961
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posted to career he iagtech wiki
by pigironjoe
on 2012-06-05 12:39:57
Abstract
Purdue University's Management and Economics Library (MEL) recognized a unique opportunity to build a strong collaboration among campus units in the career development area, enhancing students? interviewing abilities and employment opportunities. The products and services presented in this article focus on MEL's unique campuswide collaboration with twelve campus libraries and thus far eight career units in the creation and implementation of a Career Wiki. The Career Wiki, both a library product and service, offers electronic access to career resources, and it ...
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posted to wiki
by druvus
on 2012-05-30 14:43:51
Abstract
Biobanks are adopting various modes of public engagement to close the agency gap between participants and biobank builders. We propose a wiki-governance model for biobanks that harnesses Web 2.0, and which gives citizens the ability to collaborate in biobank governance and policymaking. ...
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Abstract
The widespread adoption of computers and Internet in our life has reached the classrooms, where computer-supported collaborative learning (CSCL) based on wikis offers new ways of collaboration and encourages student participation. When the number of contributions from students increases, traditional assessment procedures of e-learning settings suffer from scalability problems. In a wiki-based learning experience, automatic tools are required to support the assessment of such huge amounts of data. In this work, we present StatMediaWiki, a tool that collects and aggregates information ...
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(10 December 2007)
Abstract
<UL> <LI>This book provides practical, proven advice for encouraging adoption of your wiki project and growing it into a useful collaboration tool or vibrant online community</LI> <LI>Gives wiki users a toolbox of thriving wiki patterns, which enable newcomers to avoid making common mistakes or fumbling around for the solutions to the same problems as their predecessors</LI> <LI>Explains the major stages of wiki adoption and explores patterns that apply to each stage</LI> ...
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Abstract
Manual annotation of genomic data is extremely valuable to produce an accurate reference gene set but is expensive compared with automatic methods and so has been limited to model organisms. Annotation tools that have been developed at the Wellcome Trust Sanger Institute (WTSI, http://www.sanger.ac.uk/.) are being used to fill that gap, as they can be used remotely and so open up viable community annotation collaborations. ...
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Abstract
Wikipedia is increasingly used as a platform for collaborative data curation, but its current technical implementation has significant limitations that hinder its use in biocuration applications. Specifically, while editors can easily link between two articles in Wikipedia to indicate a relationship, there is no way to indicate the nature of that relationship in a way that is computationally accessible to the system or to external developers. For example, in addition to noting a relationship between a gene and a disease, it ...
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Nucleic acids research, Vol. 40, No. Database issue. (01 January 2012), pp. D1295-D1300, doi:10.1093/nar/gkr826
Abstract
Genome sequencing has been democratized by second-generation technologies, and even small labs can sequence metazoan genomes now. In this article, we describe '959 Nematode Genomes'--a community-curated semantic wiki to coordinate the sequencing efforts of individual labs to collectively sequence 959 genomes spanning the phylum Nematoda. The main goal of the wiki is to track sequencing projects that have been proposed, are in progress, or have ...
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