Tag workflow [at least 200 articles] Export

Recent papers classified by the tag workflow.

	Scheduling data-intensive workflows onto storage-constrained distributed resources [My Copy] In In proceedings of the 7th IEEE Symposium on Cluster Computing and The Grid (CCGrid (2007), pp. 14-17. by Arun Ramakrishnan, Gurmeet Singh, Henan Zhao, et al.Ewa Deelman, Rizos Sakellariou, Karan Vahi, Kent Blackburn, David Meyers, Michael Samidi posted to workflow storage scheduling mosa distributed data constrained bounded by thiagomanel on 2009-11-20 08:45:28 as
	Data Staging Strategies and Their Impact on the Execution of Scientific Workflows [My Copy] In DADC '09: Proceedings of the second international workshop on Data-aware distributed computing (2009), 5. by Shishir Bharathi, Ann Chervenak posted to workflow mosa data by thiagomanel on 2009-11-20 00:31:33 as
	Optimizing workflow data footprint [My Copy] Sci. Program., Vol. 15, No. 4. (2007), pp. 249-268. by Gurmeet Singh, Karan Vahi, Arun Ramakrishnan, et al.Gaurang Mehta, Ewa Deelman, Henan Zhao, Rizos Sakellariou, Kent Blackburn, Duncan Brown, Stephen Fairhurst, David Meyers, G. Bruce Berriman, John Good, Daniel S. Katz posted to workflow storage mosa footprint data by thiagomanel on 2009-11-18 22:43:44 as
	Establishing a successful bioinformatics core facility team. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000368. by Fran Lewitter, Michael Rebhan posted to workflow bioinformatics by pekrau on 2009-11-18 09:52:24 as along with 21 people and 5 groups GustavoLacerda fgibson daforerog zwang natstreet sobolevnrm orzenil kongl jago druvus kiekyon nuin operon aprasad chrisamiller dswan reyez djkt GeeSharpMinor barry ppgardne Convention on Knowledge Commons structural_bioinformatics McCammon Bioinformatics Journal picks
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted to workflow databases bioinformatics by pekrau on 2009-11-18 09:49:14 as along with 59 people and 7 groups brianb nuin skembel Sergey_gerbek mordiano remoteFuture Yanno aaltenburger marekrud guhjy dolchan frohike operon CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus heliopais franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom wei_tang fenghezi cisevol barry sdaehne druvus Pedro Martinez EvoDevo lab Barcelona Orengo Group Journal Picks Bioinformatics - CRUK ccsbs BergmanLab structural_bioinformatics McCammon
	Data Management Challenges of Data-Intensive Scientific Workflows [My Copy] by Ewa Deelman, Ann Chervenak posted to workflow scientific mosa data by thiagomanel on 2009-11-17 02:07:50 as
	The design and realisation of the myExperiment Virtual Research Environment for social sharing of workflows [My Copy] Future Generation Computer Systems, Vol. 25, No. 5. (May 2009), pp. 561-567. by David De Roure, Carole Goble, Robert Stevens posted to workflow web20 myexperiment cheminformatics bsl bioclipse by egonw on 2009-11-13 11:48:43 as along with 5 people brianb downhomekitty druvus dullhunk fgibson
	Pegasys: software for executing and integrating analyses of biological sequences. [My Copy] BMC Bioinformatics, Vol. 5 (19 April 2004) by S. P. Shah, D. Y. He, J. N. Sawkins, et al.J. C. Druce, G. Quon, D. Lett, G. X. Zheng, T. Xu, B. F. Ouellette posted to workflow biology by thiagomanel on 2009-11-12 21:42:51 as along with 6 people daforerog nlapalu pansapiens eweaver moborg asddd
	RESTful Web service composition with BPEL for REST [My Copy] Data & Knowledge Engineering, Vol. 68, No. 9. (September 2009), pp. 851-866. by Cesare Pautasso posted to workflow web_services rest bpel by pekrau on 2009-11-09 13:22:37 as
	Web API for biology with a workflow navigation system [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W11-16. by Yeondae Kwon, Yasumasa Shigemoto, Yoshikazu Kuwana, Hideaki Sugawara posted to workflow web_services soap rest bioinformatics by pekrau on 2009-11-09 13:10:46 as along with 8 people and 1 group tprpip dswan nuin cassj druvus dullhunk guhjy daforerog Bioinformatics
	Building Quick Service Query list (QSQL) to support automated service discovery for scientific workflow [My Copy] Concurrency and Computation: Practice and Experience, Vol. 21, No. 16. (November 2009), pp. 2099-2117. by Kaijun Ren, Jinjun Chen, Nong Xiao, Junqiang Song posted to workflow cites-taverna by dullhunk on 2009-11-09 12:17:48 as
	Lambda calculus as a workflow model [My Copy] Concurrency and Computation: Practice and Experience, Vol. 21, No. 16. (November 2009), pp. 1999-2017. by Peter M. Kelly, Paul D. Coddington, Andrew L. Wendelborn posted to workflow taverna cites-taverna by dullhunk on 2009-11-09 12:16:54 as
	GridAnt: A Client-Controllable Grid Workflow System [My Copy] In in 37th Hawai’i International Conference on System Science, Island of Hawaii, Big Island (2004), pp. 5-8. by Kaizar Amin, Gregor Von Laszewski, Mihael Hategan, Nestor J. Zaluzec Shawn Hampton, Albert Rossi posted to workflow mosa grid by thiagomanel on 2009-11-07 00:43:19 as
	Development of a Workflow for Protein Sequence Analysis Based on the Taverna Workbench® Software [My Copy] Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living (2009), pp. 1118-1124. by Mariana Monteiro, Manuela Pintado, Francisco Malcata, Conrad Bessant, Patrícia Moreira posted to workflow taverna cites-taverna by dullhunk on 2009-11-06 10:51:38 as
	Windshield splatter analysis with the Galaxy metagenomic pipeline [My Copy] Genome Research, Vol. 19, No. 11. (9 November 2009), pp. 2144-2153. by Sergei Kosakovsky Pond, Samir Wadhawan, Francesca Chiaromonte, et al.Guruprasad Ananda, Wen-Yu Chung, James Taylor, Anton Nekrutenko posted to workflow metagenomics eukaryotes db by djkt to the group iSEEM on 2009-11-02 18:13:32 as along with 9 people and 1 group Thaverkamp jmeppley seb1 Katje operon neils idonaldson jgill kshameer microbiology_nijmegen
	Workflow-based Process Controlling. Foundation, Design, and Application of workflow-driven Process Information Systems. (Advances in Information Systems and Management Science, 6) [My Copy] (15 July 2004) by Michael Z. Muehlen posted to workflow by mcheung on 2009-10-28 11:07:57 as
	Knowledge-Based Approach to de Novo Design Using Reaction Vectors [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 5. (22 May 2009), pp. 1163-1184. by Hina Patel, Michael J. Bodkin, Beining Chen, Valerie J. Gillet posted to workflow knowledge drug design cheminformatics by nicklynch on 2009-10-26 13:22:32 as along with 1 person alfons
	Magallanes: a web services discovery and automatic workflow composition tool [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (15 October 2009), 334. by Javier Rios, Johan Karlsson, Oswaldo Trelles posted to workflow webservices discovery bioinformatics by perkeo on 2009-10-23 11:34:16 as along with 7 people and 3 groups sillitoe ppgardne Geknitics cory_ko barriot dullhunk druvus Orengo Group Journal Picks Journal picks ronbun_2009au
	From data to knowledge to discoveries: Artificial intelligence and scientific workflows [My Copy] Scientific Programming, Vol. 17, No. 3. (1 January 2009), pp. 231-246. by Yolanda Gil posted to yolanda-gil workflow cites-taverna by dullhunk on 2009-10-02 11:13:31 as
	A Cooperative Workflow Management System with the Meta-Object Facility [My Copy] In EDOC (2001) by Xavier Le Pallec, Thomas Vantroys posted to workflow cow by petery to the group NOCE_publications on 2009-09-25 15:54:24 as
	COW, a Flexible Platform for the Enactment of Learning Scenarios [My Copy] In CRIWG, Vol. 2806 (2003), pp. 168-182. by Thomas Vantroys, Yvan Peter edited by Jesús Favela, Dominique Decouchant, Jesús Favela, Dominique Decouchant posted to workflow pedagogical_scenario cow by petery to the group NOCE_publications on 2009-09-25 15:53:45 as
	Platform Support for Pedagogical Scenarios [My Copy] Educational Technology & Society, Vol. 8, No. 3. (2005), pp. 122-137. by Yvan Peter, Thomas Vantroys posted to workflow pedagogical_scenario cow by petery to the group NOCE_publications on 2009-09-22 12:30:28 as
	A WMF-based workflow for e-learning [My Copy] (2001) by Thomas Vantroys, Yvan Peter posted to workflow pedagogical_scenario cow by petery to the group NOCE_publications on 2009-09-22 12:26:22 as
	COW, a Flexible Platform for the Enactment of Learning Scenarios [My Copy] Groupware: Design, Implementation, and Use (2003), pp. 168-182. by Thomas Vantroys, Yvan Peter posted to workflow pedagogical_scenario cow by petery to the group NOCE_publications on 2009-09-22 12:22:34 as
	An E-infrastructure to Support Collaborative Embryo Research [My Copy] In CCGRID '09: Proceedings of the 2009 9th IEEE/ACM International Symposium on Cluster Computing and the Grid (2009), pp. 520-525. by Adam Barker, Jano I. van Hemert, Richard A. Baldock, Malcolm P. Atkinson posted to workflow e_infrastructure developmental_gene_expression collaborative_research by adambarker on 2009-09-22 11:36:36 as
	Orchestrating Data-Centric Workflows [My Copy] Cluster Computing and the Grid, 2008. CCGRID '08. 8th IEEE International Symposium on (30 May 2008), pp. 210-217. by A. Barker, J. B. Weissman, J. van Hemert posted to workflow web_service scientific_workflow choreography by adambarker on 2009-09-22 11:25:38 as
	Choreographing Web Services [My Copy] IEEE Transactions on Services Computing In Services Computing, IEEE Transactions on, Vol. 2, No. 2. (2009), pp. 152-166. by Adam Barker, Christopher D. Walton, David Robertson posted to workflow choreography by adambarker on 2009-09-22 11:05:34 as along with 1 person ddahlem
	Web Services: Been There, Done That? [My Copy] IEEE Intelligent Systems, Vol. 18, No. 1. (January 2003), pp. 72-85. by Steffen Staab, Wil van der Aalst, V. Richard Benjamins, et al.Amit Sheth, John A. Miller, Christoph Bussler, Alexander Maedche, Dieter Fensel, Dennis Gannon posted to workflow web_services by pekrau on 2009-09-22 09:39:27 as along with 3 people martinrytter Jens_Lyn jahrynx
	Taverna: a tool for the composition and enactment of bioinformatics workflows. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 17. (22 November 2004), pp. 3045-3054. by Tom Oinn, Matthew Addis, Justin Ferris, et al.Darren Marvin, Martin Senger, Mark Greenwood, Tim Carver, Kevin Glover, Matthew R. Pocock, Anil Wipat, Peter Li posted to workflow workbench taverna licenselgpl by egonw on 2009-09-19 18:43:14 as along with 23 people and 1 group kshameer isimpson mtaschuk djohnson pekrau gquigley thegoose2 tjtaylor shikin oeli4321 zufar niallhaslam druvus irenas guhjy moborg wnpx dullhunk fisherp marpin nicklynch tharris alanrw dbk-lab
	The Workflow Reference Model: 10 Years On [My Copy] In Workflow Handbook 2004 by Martin Senger, Peter Rice, Tom Oinn posted to workflow by pekrau on 2009-09-15 14:19:34 as along with 2 people and 1 group nozebacle moborg StFX Centre for Logic and Information
	Biowep: a workflow enactment portal for bioinformatics applications. [My Copy] BMC bioinformatics, Vol. 8 Suppl 1 (2007) by P. Romano, E. Bartocci, G. Bertolini, et al.F. De Paoli, D. Marra, G. Mauri, E. Merelli, L. Milanesi posted to workflow web bioinformatics by pekrau on 2009-09-15 14:10:18 as along with 7 people and 1 group flbarroso Effie daforerog druvus guhjy moborg dullhunk NaCTeM
	A workflow for mutation extraction and structure annotation. [My Copy] J Bioinform Comput Biol, Vol. 5, No. 6. (December 2007), pp. 1319-1337. by R. Kanagasabai, K. H. Choo, S. Ranganathan, C. J. Baker posted to structural_biology workflow proteins bioinformatics by pekrau on 2009-09-15 14:07:23 as along with 1 person dullhunk
	An XML transfer schema for exchange of genomic and genetic mapping data: implementation as a web service in a Taverna workflow [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (14 August 2009), 252. by Trevor Paterson, Andy Law posted to xml workflow web transfer taverna service schema mapping implementation genomic genetic exchange data by dswan to the group Bioinformatics on 2009-09-14 11:53:02 as along with 7 people pekrau FemkeDeBackere guhjy cisevol dullhunk reyez druvus
	Improving access to clinical information in an emergency department: a qualitative study. [My Copy] AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium (2008) by Boonchai Kijsanayotin, Jing Du, Nawanan Theera-Ampornpunt, Ayse P. Gurses, Stuart M. Speedie posted to workflow information flow emergency department by nawanan on 2009-09-13 17:58:39 as
	The GenAlg project: developing a new integrating data model, language, and tool for managing and querying genomic information [My Copy] SIGMOD Rec., Vol. 33, No. 2. (2004), pp. 45-50. by Joachim Hammer, Markus Schneider posted to workflow by antonkratz on 2009-09-13 06:48:49 as
	KNIME: The Konstanz Information Miner [My Copy] Data Analysis, Machine Learning and Applications (2008), pp. 319-326. by Michael R. Berthold, Nicolas Cebron, Fabian Dill, et al.Thomas R. Gabriel, Tobias Kötter, Thorsten Meinl, Peter Ohl, Christoph Sieb, Kilian Thiel, Bernd Wiswedel posted to workflow software bioinformatics by pekrau on 2009-09-10 15:51:41 as
	Mobyle: a new full web bioinformatics framework. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 22. (15 November 2009), pp. 3005-3011. by Bertrand Néron, Hervé Ménager, Corinne Maufrais, et al.Nicolas Joly, Julien Maupetit, Sébastien Letort, Sébastien Carrere, Pierre Tuffery, Catherine Letondal posted to workflow by guhjy on 2009-09-10 03:59:52 as along with 11 people reyez inesdesantiago daforerog gwallau sebastien_vigneau dullhunk n00c rdiaz nuin pekrau druvus
	Exploring Scientific Workflow Provenance Using Hybrid Queries over Nested Data and Lineage Graphs [My Copy] Scientific and Statistical Database Management (2009), pp. 237-254. by Manish Anand, Shawn Bowers, Timothy McPhillips, Bertram Ludäscher posted to workflow taverna provenance cites-taverna by dullhunk on 2009-09-09 12:40:23 as
	Designing the myExperiment Virtual Research Environment for the Social Sharing of Workflows [My Copy] e-Science and Grid Computing, International Conference on In E-SCIENCE '07: Proceedings of the Third IEEE International Conference on e-Science and Grid Computing, Vol. 0 (2007), pp. 603-610. by David De Roure, Carole Goble, Robert Stevens posted to workflow tool experimental_protocols design_principles data_integration by mtaschuk on 2009-09-07 12:25:32 as along with 2 people moborg alanrw
	Integrating scientific data for drug discovery and development using the Life Sciences Grid [My Copy] Expert Opinion on Drug Discovery, Vol. 4, No. 6. (June 2009), pp. 687-699. by Ernst R. Dow, James B. Hughes, Susie M. Stephens, Vaibhav A. Narayan, Richard W. Bishop posted to workflow web_services drug_targets by pekrau on 2009-09-04 15:02:48 as along with 3 people and 1 group joergkurtwegner dullhunk nicklynch Drug-Design
	Taverna Workflows: Syntax and Semantics [My Copy] e-Science and Grid Computing, IEEE International Conference on In e-Science and Grid Computing, IEEE International Conference on (2007), pp. 441-448. by Daniele Turi, Paolo Missier, Carole Goble, David D. Roure, Tom Oinn posted to workflow web_services bioinformatics by pekrau on 2009-09-04 14:46:55 as along with 2 people druvus alanrw
	Integrating ARC Grid Middleware with Taverna Workflows. [My Copy] Bioinformatics (19 March 2008) by Hajo N N. Krabbenhöft, Steffen Möller, Daniel Bayer posted to workflow grid bioinformatics by pekrau on 2009-09-04 14:46:14 as along with 3 people dullhunk GeeSharpMinor guhjy
	BioMart--biological queries made easy. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 22. by Damian Smedley, Syed Haider, Benoit Ballester, et al.Richard Holland, Darin London, Gudmundur Thorisson, Arek Kasprzyk posted to workflow bioinformatics by pekrau on 2009-09-04 14:42:45 as along with 29 people and 4 groups aaltenburger artaban421 sjcockell lmichan jdbowes fgibson gangcai daforerog jfr fisherp allysonlister Stew grahamc dswan Zephyrus renatomilani guhjy natstreet pablocarb Cortel dbk mitko brianb ajaymalik neils kshameer dullhunk druvus cisevol Bioinformatics - CRUK Bioinformatics Roswell Cancer Crosstalk BergmanLab
	myGrid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences [My Copy] Data Integration in the Life Sciences (2007), pp. 59-70. by Steve Pettifer, Katherine Wolstencroft, Pinar Alper, et al.Teresa Attwood, Alain Coletta, Carole Goble, Peter Li, Philip Mcdermott, James Marsh, Thomas Oinn, James Sinnott, David Thorne posted to workflow bioinformatics by pekrau on 2009-09-04 14:41:38 as along with 3 people flipip23 druvus alanrw
	Taverna: lessons in creating a workflow environment for the life sciences [My Copy] Concurrency and Computation: Practice and Experience, Vol. 18, No. 10. (August 2006), pp. 1067-1100. by Tom Oinn, Mark Greenwood, Matthew Addis, et al.Nedim M. Alpdemir, Justin Ferris, Kevin Glover, Carole Goble, Antoon Goderis, Duncan Hull, Darren Marvin, Peter Li, Phillip Lord, Matthew R. Pocock, Martin Senger, Robert Stevens, Anil Wipat, Chris Wroe posted to workflow bioinformatics by pekrau on 2009-09-04 14:40:28 as along with 6 people druvus moborg wnpx toshiaki_katayama alanrw dgroth
	WebLab: a data-centric, knowledge-sharing bioinformatic platform [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W33-39. by Xiaoqiao Liu, Jianmin Wu, Jun Wang, et al.Xiaochuan Liu, Shuqi Zhao, Zhe Li, Lei Kong, Xiaocheng Gu, Jingchu Luo, Ge Gao posted to workflow web_services bioinformatics by pekrau on 2009-09-01 13:29:22 as along with 14 people applebyb fgibson abhishek_tiwari dullhunk leemond31 pininforthefjords nuin daforerog druvus operon guhjy psique renatomilani neils
	Design and Architecture of Web Services for Simulation of Biochemical Systems [My Copy] Data Integration in the Life Sciences (2009), pp. 182-195. by Joseph Dada, Pedro Mendes posted to web_services systems_biology workflow software bioinformatics by pekrau on 2009-09-01 13:27:10 as along with 3 people allysonlister mtaschuk dullhunk
	What is Web 2.0: Design Patterns and Business Models for the Next Generation of Software [My Copy] Social Science Research Network Working Paper Series (22 August 2007) by Tim Oreilly posted to web_services workflow web software by pekrau on 2009-09-01 08:20:51 as along with 24 people and 2 groups yaninagt AnthonySoprano mrp3rs0n mkfabian LibraryDemoMtpx aboutlas tanyacovi6 artaban421 eudominguezmartin MARCOUNAM adipple eloyvaltierra aalves paulapetry lmichan public2 chrisd sototozo captsolo josh_lasson ChenZhe marclijour warding rrbarb New Media - IMV Social computing
	Experience using web services for biological sequence analysis. [My Copy] Briefings in bioinformatics, Vol. 9, No. 6. (11 November 2008), pp. 493-505. by Heinz Stockinger, Teresa Attwood, Shahid Nadeem N. Chohan, et al.Richard Côté, Philippe Cudré-Mauroux, Laurent Falquet, Pedro Fernandes, Robert D. Finn, Taavi Hupponen, Eija Korpelainen, Alberto Labarga, Aurelie Laugraud, Tania Lima, Evangelos Pafilis, Marco Pagni, Steve Pettifer, Isabelle Phan, Nazim Rahman posted to web_services workflow soap rest bioinformatics by pekrau on 2009-08-30 19:58:04 as along with 13 people and 1 group daforerog svozil behindtherabbit dswan allysonlister alaninmcr jmeppley Cortel kshameer guhjy druvus dullhunk nuin Bioinformatics
	Restful web services vs. "big"' web services: making the right architectural decision [My Copy] In WWW '08: Proceeding of the 17th international conference on World Wide Web (2008), pp. 805-814. by Cesare Pautasso, Olaf Zimmermann, Frank Leymann posted to web_services workflow soap rest by pekrau on 2009-08-30 19:51:09 as along with 11 people and 1 group Iully lauragon thegoose2 architect aquaryus fukumori jvalentini samuelsouza dullhunk tharris pautasso LInS

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taverna	62
bioinformatics	51
management	51
process	47
grid	45
security	45
diplomarbeit	44
project--email	42
rbac	36
collaboration	34
communication	34
modeling	29
web	29
email	27
software	24
bpel	21
cscw	21
webservices	21
bioinformatic	20
bpm	20
ontology	20
healthcare	19
printed	19
service	19
flexible	18
cooperation	17
web_services	17
cites-taverna	16
information	15
services	15
egovernment	14
dynamic	13
e-science	13
business	12
composition	12
data	12
organizational	12
radiology	12
access-control	11
coordination	11
humantask	11
verification	11
context-awareness	10
exception	10
model	10
of	10
semantic	10
transaction	10
community	9
datamining	9
dbms	9
distributed	9
hci	9
imaging	9
p2p	9
prewww2006	9
scientific	9
system	9
tool	9
toread	9
uml	9
adaptive_workflow	8
architecture	8
automation	8
change	8
computing	8
flexibility	8
mygrid	8
petri	8
pipeline	8
taxonomy	8
web-services	8
web_service	8
xml	8
adaptation	7
bioinf	7
informatics	7
iow	7
mas	7
modelling	7
patterns	7
role	7
study	7
systems	7
web-service	7
wfms	7
awareness	6
context	6
correctness	6
cow	6
database	6
evolution	6
knowledge_sharing	6
momento	6
pattern	6
rest	6
rules	6
scheduling	6
variability	6
wiki	6

Tag workflow [at least 200 articles] Export

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