APRegier's comparative [8 articles] Export

Recent papers added to APRegier's library classified by the tag comparative. You can also see everyone's comparative.

	Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements [My Copy] Genome Research, Vol. 14, No. 7. (July 2004), pp. 1394-1403. by Aaron C. E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna posted to alignment comparative multiple pf454-paper synteny tool by APRegier on 2009-08-07 19:48:46 as along with 13 people and 2 groups rneches foxpowa ArtemPankin hpaces Neeperando bcondon semrich operon catmat AaronDarling azazello mariakmejia druvus Khavkin's lab gatech-compgenomics
	Comparative analysis of the transcription-factor gene regulatory networks of E. coli and S. cerevisiae [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008) by Lev G. Vargas, Moises Santillan posted to comparative networks regulatory by APRegier on 2009-03-10 18:22:20 as along with 1 person ghsalazar
	Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes -- Gupta et al. 18 (7): 1133 -- Genome Res. [My Copy] posted to comparative multimodal proteins by APRegier on 2008-10-31 14:48:42 as
	Large-scale assignment of orthology: back to phylogenetics? [My Copy] Genome Biology, Vol. 9, No. 10. (2008) by Toni Gabaldon posted to comparative multiple phylogenetics by APRegier on 2008-10-31 14:21:15 as along with 9 people cerca cgaugain GustavoLacerda treangen maximilianh samgj natstreet druvus barriot
	Comparative genomics of the neglected human malaria parasite Plasmodium vivax [My Copy] Nature, Vol. 455, No. 7214. (October 2008), pp. 757-763. by Jane M. Carlton, John H. Adams, Joana C. Silva, et al.Shelby L. Bidwell, Hernan Lorenzi, Elisabet Caler, Jonathan Crabtree, Samuel V. Angiuoli, Emilio F. Merino, Paolo Amedeo, Qin Cheng, Richard M. Coulson, Brendan S. Crabb, Del, Kobby Essien, Tamara V. Feldblyum, Carmen Fernandez-Becerra, Paul R. Gilson, Amy H. Gueye, Xiang Guo, Simon Kang/'a, Taco W. Kooij, Michael Korsinczky, Esmeralda V. Meyer, Vish Nene, Ian Paulsen, Owen White, Stuart A. Ralph, Qinghu Ren, Tobias J. Sargeant, Steven L. Salzberg, Christian J. Stoeckert, Steven A. Sullivan, Marcio M. Yamamoto, Stephen L. Hoffman, Jennifer R. Wortman, Malcolm J. Gardner, Mary R. Galinski, John W. Barnwell, Claire M. Fraser-Liggett posted to comparative plasmodium by APRegier on 2008-10-29 19:57:15 as along with 4 people jbhiatt zwang shung neils
	Tracembler - software for in-silico chromosome walking in unassembled genomes [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (09 May 2007), 151. by Qunfeng Dong, Matthew Wilkerson, Volker Brendel posted to assembly comparative by APRegier on 2008-10-23 16:33:33 as along with 3 people cmzmasek druvus iris42
	A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome [My Copy] Genome Biology, Vol. 8 (20 March 2007), R41. by Kerrin S. Small, Michael Brudno, Matthew M. Hill, Arend Sidow posted to alignment comparative lagan polymorphism scaffolding by APRegier on 2008-10-23 16:29:15 as along with 3 people dakelley adijr nhp
	Discovering regulatory motifs in the Plasmodium genome using comparative genomics [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 24, No. 17. (1 September 2008), pp. 1843-1849. by Jie Wu, Douglas H. Sieglaff, Joshua Gervin, Xiaohui S. Xie posted to comparative plasmodium regulatory by APRegier on 2008-09-01 16:07:10 as along with 5 people idonaldson xili03 semrich Neeperando neils

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inversion-paper	35
structural	25
short-read	21
pf454-paper	18
human	16
assembly	16
inversions	15
anopheles	14
alignment	12
comparative	8
drosophila	8
polymorphism	8
plasmodium	7
variation	7
resequencing	7
population	6
evolution	6
snps	6
gene-family	5
copy-number	5
selection	5
genetics	4
network	4
speciation	4
2la	4
inference	4
multiple	4
recombination	3
454	3
quality	3
networks	3
hapmap	3
regulatory	3
tool	3
gaps	3
illumina	3
duplications	3
conserved	2
statistics	2
synteny	2
inversion	2
repeats	2
keepin-it-real	2
assembly-quality	2
structure	2
cancer	2
haplotype	2
plants	1
maq	1
transposons	1
lagan	1
review	1
scaffolding	1
multimodal	1
phylogenetics	1
visualization	1
identifiers	1
service	1
chromosomal	1
shotgun	1
coverage	1
expression	1
sequencing	1
mechanism	1
solid	1
mcmc	1
number	1
cgh	1
machine-learning	1
breakpoints	1
proteins	1
shrap	1
java	1
draft	1
copy	1
transcription	1
eqtl	1
mammals	1
celera	1
birds	1
short-reads	1
microarrays	1
web	1
disease	1

APRegier's comparative [8 articles] Export

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