AbnerCYH's biology [128 articles] Export

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	Ising-like dynamics in large-scale functional brain networks [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 6. (2009), 061922. by Daniel Fraiman, Pablo Balenzuela, Jennifer Foss, Dante R. Chialvo posted to biology complex graph by AbnerCYH on 2009-06-24 12:42:14 as along with 1 person paulschlesinger
	Dynamical networks in tRNA:protein complexes [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6620-6625. by Anurag Sethi, John Eargle, Alexis A. Black, Zaida Luthey-Schulten posted to biology complex graph by AbnerCYH on 2009-06-23 08:06:58 as along with 4 people and 2 groups anuragsethi jeargle jmccammon sobolevnrm McCammon baker-group
	Uncovering the rules for proteinâprotein interactions from yeast genomic data [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 10. (10 March 2009), pp. 3752-3757. by Jin Wang, Chunhe Li, Erkang Wang, Xidi Wang posted to biology complex by AbnerCYH on 2009-06-23 07:58:24 as along with 8 people and 1 group carlk guhjy sobolevnrm mariap3636 mstumpf grahamc zwang phoenixzxl baker-group
	RAPID: Randomized pharmacophore identification for drug design [My Copy] Computational Geometry, Vol. 10, No. 4. (July 1998), pp. 263-272. by P. Finn posted to algorithms biology by AbnerCYH on 2009-06-10 08:03:59 as
	Exploiting indirect neighbours and topological weight to predict protein function from proteinprotein interactions [My Copy] Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1623-1630. by Chua, Hon Nian, Sung, Wing-Kin, Wong, Limsoon posted to algorithms biology complex graph kdd by AbnerCYH on 2009-06-03 15:27:59 as along with 3 people and 1 group jiny lfriedl carlk kdl
	Network-based prediction of protein function [My Copy] Molecular Systems Biology, Vol. 3 (13 March 2007) by Roded Sharan, Igor Ulitsky, Ron Shamir posted to biology complex graph by AbnerCYH on 2009-06-03 15:26:52 as along with 24 people and 1 group cerca ptrobajo kiekyon roys jwhitney dragonrez Sonix mtaschuk babakap phoenixzxl druvus pengchy jjray cmmorel wnpx julius mikaelhuss massivemayhem cjeans iris_2001 karfunkel mingzhi ellakat carlk SysbioMPI-TCells
	The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease [My Copy] Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935. by Justin Lamb, Emily D. Crawford, David Peck, et al.Joshua W. Modell, Irene C. Blat, Matthew J. Wrobel, Jim Lerner, Jean-Philippe Brunet, Aravind Subramanian, Kenneth N. Ross, Michael Reich, Haley Hieronymus, Guo Wei, Scott A. Armstrong, Stephen J. Haggarty, Paul A. Clemons, Ru Wei, Steven A. Carr, Eric S. Lander, Todd R. Golub posted to biology complex by AbnerCYH on 2009-05-20 09:17:03 as along with 29 people and 9 groups gbloeb zufar ipark-kaist bertelsen mingzhi Dulcinea dansullivanblk BragilMassoud guhjy kuhn jfr yas balajis marcius lhonigberg neveaire kengg ealloza koller mlovell jdiggans ezra jeremymiller frohike massivemayhem lp2 pablomendes jdiezperezj askrajiv Biostatistics Computational-Genomics Bioinformatics Neuroscience T_lab BioinfoCIPF SGU-CIPF GeschwindLab Plantandetc
	A simple and robust method for connecting small-molecule drugs using gene-expression signatures [My Copy] BMC Bioinformatics, Vol. 9 (02 June 2008), 258. by Shu-Dong Zhang, Timothy W. Gant posted to biology complex by AbnerCYH on 2009-05-20 09:16:59 as along with 5 people frohike Yanno orzenil guhjy jfr
	Gene Expression-Based Biomarkers of Drug Safety [My Copy] Biomarker Methods in Drug Discovery and Development (2008), pp. 27-49. by Eric A. Blomme, Scott E. Warder posted to biology complex by AbnerCYH on 2009-05-20 09:16:45 as
	Fast index based algorithms and software for matching position specific scoring matrices [My Copy] BMC Bioinformatics, Vol. 7 (24 August 2006), 389. by Michael Beckstette, Robert Homann, Robert Giegerich, Stefan Kurtz posted to algorithms biology by AbnerCYH on 2009-05-08 11:00:24 as
	A CA-based epidemic model for HIV/AIDS transmission with heterogeneity [My Copy] Annals of Operations Research, Vol. 168, No. 1. (1 April 2009), pp. 81-99. by Huiyu Xuan, Lida Xu, Lu Li posted to automata biology complex dynamics by AbnerCYH on 2009-03-24 08:44:06 as
	Fast Algorithms for the Density Finding Problem [My Copy] Algorithmica, Vol. 53, No. 3. (1 March 2009), pp. 298-313. by D. Lee, Tien-Ching Lin, Hsueh-I Lu posted to algorithms biology geometries by AbnerCYH on 2009-03-02 14:53:28 as
	Computational challenges in systems biology [My Copy] Computer Science Review, Vol. 3, No. 1. (February 2009), pp. 1-17. by Allison P. Heath, Lydia E. Kavraki posted to algorithms biology complex complexity by AbnerCYH on 2009-02-26 00:10:27 as along with 1 person and 1 group behindtherabbit Bioinformatics
	Network-based classification of breast cancer metastasis. [My Copy] Molecular systems biology, Vol. 3 (16 October 2007) by Han-Yu Y. Chuang, Eunjung Lee, Yu-Tsueng T. Liu, Doheon Lee, Trey Ideker posted to biology complex kdd by AbnerCYH on 2009-02-14 00:21:57 as along with 29 people and 4 groups yaredo fesousa ipark-kaist aviad_work zufar provero jmuhlich Zephyrus ggallone giovenko winterschlaefer isimpson ihpark bertelsen jfr kengg frohike mikaelhuss cjeans zwang cerami abhattac shikin oelemento roys ptrobajo dap5087 saman_vp verdicchio Complex Networks Jarman Lab Bioinformatics GeneGo
	Combining self-healing and proofreading in self-assembly [My Copy] Natural Computing by David Soloveichik, Matthew Cook, Erik Winfree posted to algorithms biology complexity by AbnerCYH on 2009-01-31 12:51:35 as along with 1 person stsaft
	Assembly models for Papovaviridae based on tiling theory [My Copy] Physical Biology, Vol. 2, No. 3. (September 2005), 175. by T. Keef, A. Taormina, R. Twarock posted to biology combinatorics complex by AbnerCYH on 2009-01-30 05:17:47 as along with 1 person kupopo
	A tiling approach to virus capsid assembly explaining a structural puzzle in virology [My Copy] Journal of Theoretical Biology, Vol. 226, No. 4. (21 February 2004), pp. 477-482. by R. Twarock posted to biology combinatorics complex by AbnerCYH on 2009-01-30 05:17:31 as along with 1 person kupopo
	Alternative Mechanisms of Structuring Biomembranes: Self-Assembly versus Self-Organization [My Copy] Physical Review Letters, Vol. 95, No. 19. (1 November 2005), 198101. by Karin John, Markus Bär posted to biology dynamics math by AbnerCYH on 2009-01-29 22:36:42 as
	Randomized Self-Assembly for Exact Shapes [My Copy] (14 Jan 2009) by David Doty posted to algorithms biology complexity by AbnerCYH on 2009-01-22 13:34:22 as
	Complexity of Self-Assembled Shapes [My Copy] SIAM Journal on Computing, Vol. 36, No. 6. (2007), pp. 1544-1569. by David Soloveichik, Erik Winfree posted to algorithms biology complexity by AbnerCYH on 2009-01-19 21:42:22 as
	Algorithmic self-assembly of DNA [My Copy] (19 May 1998) by Erik Winfree posted to algorithms biology complexity by AbnerCYH on 2009-01-19 18:23:05 as
	Complexities for Generalized Models of Self-Assembly [My Copy] SIAM Journal on Computing, Vol. 34, No. 6. (2005), pp. 1493-1515. by Gagan Aggarwal, Qi Cheng, Michael H. Goldwasser, Ming Y. Kao, Pablo M. de Espanes, Robert T. Schweller posted to algorithms biology complexity by AbnerCYH on 2009-01-19 18:09:53 as
	DNA Self-Assembly For Constructing 3D Boxes [My Copy] Algorithms and Computation (2001), pp. 429-441. by Kao Ming-Yang, Vijay Ramachandran posted to algorithms biology by AbnerCYH on 2009-01-19 18:05:43 as
	Reducing tile complexity for self-assembly through temperature programming [My Copy] In SODA '06: Proceedings of the seventeenth annual ACM-SIAM symposium on Discrete algorithm (2006), pp. 571-580. by Ming-Yang Kao, Robert Schweller posted to algorithms biology by AbnerCYH on 2009-01-19 18:04:10 as along with 1 person stsaft
	Randomized Self-assembly for Approximate Shapes [My Copy] 35th International Colloquium, ICALP 2008, Reykjavik, Iceland, July 7-11, 2008, Proceedings (2008), pp. 370-384. by Ming-Yang Kao, Robert Schweller posted to algorithms biology by AbnerCYH on 2009-01-19 18:03:17 as
	Complexities for generalized models of self-assembly [My Copy] In SODA '04: Proceedings of the fifteenth annual ACM-SIAM symposium on Discrete algorithms (2004), pp. 880-889. by Gagan Aggarwal, Michael H. Goldwasser, Ming Y. Kao, Robert T. Schweller posted to algorithms biology complexity by AbnerCYH on 2009-01-14 18:07:48 as
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted to algorithms biology kdd by AbnerCYH on 2009-01-10 05:10:08 as along with 44 people and 2 groups darian chasmand hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Stew inesdesantiago heliopais AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell Bioinformatics - CRUK ConklinLab
	Prediction by Graph Theoretic Measures of Structural Effects in Proteins Arising from Non-Synonymous Single Nucleotide Polymorphisms [My Copy] PLoS Comput Biol, Vol. 4, No. 7. (25 July 2008), e1000135. by Tammy M. Cheng, Yu-En Lu, Michele Vendruscolo, Pietro Lio', Tom L. Blundell posted to algorithms biology graph by AbnerCYH on 2009-01-09 13:57:46 as along with 5 people aqeel aramesh2 GeeSharpMinor aalibes GustavoLacerda
	GSEA-SNP: Applying Gene Set Enrichment Analysis to SNP data from genome-wide association studies [My Copy] Bioinformatics (14 October 2008), btn516. by Marit Holden, Shiwei Deng, Leszek Wojnowski, Bettina Kulle posted to algorithms biology by AbnerCYH on 2008-12-05 18:24:43 as along with 9 people and 1 group kimorley TRHvidsten jfr Zephyrus wimufi guhjy akmanning sg45653 paszkows Roswell Cancer Crosstalk
	A survey of motif discovery methods in an integrated framework [My Copy] Biology Direct, Vol. 1, No. 1. (06 April 2006), 11. by Geir K. Sandve, Finn Drabløs posted to algorithms biology by AbnerCYH on 2008-11-29 09:53:35 as along with 11 people and 1 group tomhebbron Scis0000002 maximilianh wowalz aprasad dpollard samal yevishere csdhwang idonaldson yoonk EisenLab
	Mining Bridge and Brick Motifs From Complex Biological Networks for Functionally and Statistically Significant Discovery [My Copy] Systems, Man, and Cybernetics, Part B, IEEE Transactions on In Systems, Man, and Cybernetics, Part B, IEEE Transactions on, Vol. 38, No. 1. (2008), pp. 17-24. by Chia-Ying Cheng, Chung-Yuan Huang, Chuen-Tsai Sun posted to biology graph kdd by AbnerCYH on 2008-11-21 20:10:41 as
	An Introduction to Metabolic Networks and Their Structural Analysis [My Copy] IEEE/ACM Transactions on Computational Biology and Bioinformatics In Computational Biology and Bioinformatics, IEEE/ACM Transactions on, Vol. 5, No. 4. (2008), pp. 594-617. by Vincent Lacroix, Ludovic Cottret, Patricia Thébault, Marie F. Sagot posted to biology complex graph kdd by AbnerCYH on 2008-11-13 14:21:42 as along with 4 people ptrobajo cgaugain yujiangwang nsamways
	Gene expression data analysis using a novel approach to biclustering combining discrete and continuous data. [My Copy] IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM In Computational Biology and Bioinformatics, IEEE/ACM Transactions on, Vol. 5, No. 4. (c 2008), pp. 583-593. by Yann Christinat, Bernd Wachmann, Lei Zhang posted to biology kdd by AbnerCYH on 2008-11-13 14:21:00 as along with 1 person meanerelk
	Innovative Computational Methods for Transcriptomic Data Analysis: A Case Study in the Use of FPT for Practical Algorithm Design and Implementation [My Copy] The Computer Journal, Vol. 51, No. 1. (1 January 2008), pp. 26-38. by Michael A. Langston, Andy D. Perkins, Arnold M. Saxton, Jon A. Scharff, Brynn H. Voy posted to algorithms biology complexity kdd parameterized by AbnerCYH on 2008-11-13 09:30:50 as along with 1 person guhjy
	PPiClust: EFFICIENT CLUSTERING OF 3D PROTEIN–PROTEIN INTERACTION INTERFACES [My Copy] Journal of Bioinformatics and Computational Biology, Vol. 6, No. 3. (July 2008), pp. 415-433. by A. U. N. G. Zeyar, T. A. N. Soon-Heng, N. G. See-Kiong, T. A. N. Kian-Lee posted to algorithms biology by AbnerCYH on 2008-09-19 16:50:46 as
	Network Analysis of Intrinsic Functional Brain Connectivity in Alzheimer's Disease [My Copy] PLoS Comput Biol, Vol. 4, No. 6. (27 June 2008), e1000100. by Kaustubh Supekar, Vinod Menon, Daniel Rubin, Mark Musen, Michael D. Greicius posted to biology complex graph kdd by AbnerCYH on 2008-09-09 12:05:43 as along with 3 people and 2 groups yonghe pbellec Borelli Complex_Brain_Networks resting-state_networks
	Insights into Protein–DNA Interactions through Structure Network Analysis [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000170. by R. Sathyapriya, M. S. Vijayabaskar, Saraswathi Vishveshwara posted to algorithms biology complex graph kdd by AbnerCYH on 2008-09-08 07:14:20 as along with 9 people and 1 group TRHvidsten svozil Zephyrus Ema emptyhb aalibes Totobox zwang hmk Roswell Cancer Crosstalk
	An algorithm based on graph theory for the assembly of contigs in physical mapping of DNA. [My Copy] Computer applications in the biosciences : CABIOS, Vol. 10, No. 3. (June 1994), pp. 309-317. by P. Zhang, E. A. Schon, S. G. Fischer, et al.E. Cayanis, J. Weiss, S. Kistler, P. E. Bourne posted to algorithms biology graph by AbnerCYH on 2008-09-08 06:18:26 as along with 1 person Neeperando
	Robust and efficient identification of biomarkers by classifying features on graphs [My Copy] Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2023-2029. by Taehyun Hwang, Hugues Sicotte, Ze Tian, et al.Baolin Wu, Jean-Pierre Kocher, Dennis A. Wigle, Vipin Kumar, Rui Kuang posted to algorithms biology graph by AbnerCYH on 2008-09-08 06:16:32 as along with 10 people mdharsee frohike VGreiff guhjy jfr ihpark nuin GeeSharpMinor mitko sg45653
	Immunology for physicists [My Copy] Reviews of Modern Physics, Vol. 69, No. 4. (1 October 1997), 1219. by Alan S. Perelson, Gérard Weisbuch posted to biology complex by AbnerCYH on 2008-09-01 06:09:47 as along with 1 person awooga
	Getting Started in Computational Immunology [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000128. by Steven H. Kleinstein posted to algorithms biology complex by AbnerCYH on 2008-08-30 20:06:43 as along with 13 people and 2 groups tomhebbron svenrahmann VGreiff akraemer najwvandijk Zephyrus nuin barry reyez dakelley GeeSharpMinor rebeccamancy jjray Roswell Cancer Crosstalk Bioinformatics
	Genome-Scale Computational Biology and Bioinformatics in Australia [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000068. by Mark A. Ragan, Tim Littlejohn, Bruce Ross posted to algorithms biology by AbnerCYH on 2008-08-30 20:02:36 as along with 4 people reyez dullhunk barry neils
	Networking metabolites and diseases [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 29. (22 July 2008), pp. 9849-9850. by Pascal Braun, Edward Rietman, Marc Vidal posted to biology complex graph by AbnerCYH on 2008-08-29 11:56:18 as along with 5 people mingzhi roys ptrobajo guhjy Borelli
	Geometric interpretation of gene coexpression network analysis. [My Copy] PLoS computational biology, Vol. 4, No. 8. (15 August 2008), e1000117. by Steve Horvath, Jun Dong posted to algorithms biology complex graph kdd by AbnerCYH on 2008-08-20 14:30:21 as along with 22 people jeremymiller zufar dolchan sficklin isimpson rdiaz guhjy cswinburne jfr ptrobajo pengchy nolodie druvus aramesh2 kengg roys Ema tmmurali Borelli Totobox davidchavalarias caseybrown
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to biology complex kdd by AbnerCYH on 2008-08-20 09:39:42 as along with 46 people and 4 groups Jporci gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark chrisamiller dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz Bioinformatics BioinfoCIPF GeschwindLab Indigene
	An Experimental Study of the Coloring Problem on Human Subject Networks [My Copy] Science, Vol. 313, No. 5788. (11 August 2006), pp. 824-827. by Michael Kearns, Siddharth Suri, Nick Montfort posted to biology complex graph kdd by AbnerCYH on 2008-08-20 03:52:48 as along with 2 people maralena ssuri
	On the origin of distribution patterns of motifs in biological networks. [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008) by Arun Konagurthu, Arthur Lesk posted to algorithms biology complex graph kdd by AbnerCYH on 2008-08-13 06:36:51 as along with 4 people jaspervoskuilen tomhebbron lptolik barriot
	Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis [My Copy] Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635. by Ari Loytynoja, Nick Goldman posted to algorithms biology by AbnerCYH on 2008-07-26 06:14:04 as along with 29 people and 3 groups memerman operon TRHvidsten BioNica cmzmasek timflutre pradiptaray alexeid marti bpcusack hpaces dinnes gjuggler djkt ArtemPankin phoenixzxl jago marck imtechnology aprasad zwang bmaust bpb michaelbarton Schmidtc gulsacan emptyhb jlgreen nuin Khavkin's lab iSEEM Green Lab
	Semantic integration to identify overlapping functional modules in protein interaction networks [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (24 July 2007), 265. by Young R. Cho, Woochang Hwang, Murali Ramanathan, Aidong Zhang posted to algorithms biology complex kdd by AbnerCYH on 2008-07-21 14:52:45 as along with 4 people guhjy tmmurali grahamc carlk
	Molecular interaction maps of bioregulatory networks: a general rubric for systems biology. [My Copy] Mol Biol Cell, Vol. 17, No. 1. (January 2006), pp. 1-13. by K. W. Kohn, M. I. Aladjem, J. N. Weinstein, Y. Pommier posted to algorithms biology complex graph by AbnerCYH on 2008-07-19 19:15:38 as along with 5 people and 1 group cannin eckart_bindewald wnpx karthikram lenov Neoscientists

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algorithms	687
graph	478
complexity	189
combinatorics	150
biology	128
kdd	128
math	127
complex	125
stochastic	113
topology	82
optimization	63
geometries	62
order	61
algebra	56
data_structure	52
dynamics	43
parameterized	38
testing	32
information	28
logic	27
automata	22
game	19
parallel	18
distributed	15
economic	14
sys_performance	14
string	7
neuro	6
history	4

AbnerCYH's biology [128 articles] Export

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