Texas Population Substructure and Its Impact on Estimating the Rarity of Y STR Haplotypes from DNA Evidence* Export

@article{citeulike:5687069, abstract = {Three sampled populations of unrelated males-African American, Caucasian, and Hispanic, all from Texas-were typed for 16 Y short tandem repeat (STR) markers using the AmpFlSTR((R)) Yfiler(TM) kit. These samples also were typed previously for the 13 core CODIS autosomal STR loci. Most of the 16 marker haplotypes (2478 out of 2551 distinct haplotypes) were observed only once in the data sets. Haplotype diversities were 99.88\%, 99.89\%, and 99.87\% for the African American, Caucasian, and Hispanic sample populations, respectively. F(ST) values were very small when a haplotype comprised 10-16 markers. This suggests that inclusion of substructure correction is not required. However, haplotypes consisting of fewer loci may require the inclusion of F(ST) corrections. The testing of independence of autosomal and Y STRs supports the proposition that the frequencies of autosomal and Y STR profiles can be combined using the product rule.}, author = {Budowle, Bruce and Ge, Jianye and Aranda, Xavier G. and Planz, John V. and Eisenberg, Arthur J. and Chakraborty, Ranajit}, citeulike-article-id = {5687069}, citeulike-linkout-0 = {http://dx.doi.org/10.1111/j.1556-4029.2009.01105.x}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/19627418}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=19627418}, day = {15}, doi = {10.1111/j.1556-4029.2009.01105.x}, issn = {1556-4029}, journal = {Journal of forensic sciences}, keywords = {17\_strs, african-american, european-american, hispanic-american, texas, y}, month = {July}, posted-at = {2009-08-31 05:07:43}, priority = {5}, title = {Texas Population Substructure and Its Impact on Estimating the Rarity of Y STR Haplotypes from DNA Evidence*}, url = {http://dx.doi.org/10.1111/j.1556-4029.2009.01105.x}, year = {2009} }

TY - JOUR ID - citeulike:5687069 L3 - citeulike-article-id:5687069 N2 - Three sampled populations of unrelated males-African American, Caucasian, and Hispanic, all from Texas-were typed for 16 Y short tandem repeat (STR) markers using the AmpFlSTR((R)) Yfiler(TM) kit. These samples also were typed previously for the 13 core CODIS autosomal STR loci. Most of the 16 marker haplotypes (2478 out of 2551 distinct haplotypes) were observed only once in the data sets. Haplotype diversities were 99.88%, 99.89%, and 99.87% for the African American, Caucasian, and Hispanic sample populations, respectively. F(ST) values were very small when a haplotype comprised 10-16 markers. This suggests that inclusion of substructure correction is not required. However, haplotypes consisting of fewer loci may require the inclusion of F(ST) corrections. The testing of independence of autosomal and Y STRs supports the proposition that the frequencies of autosomal and Y STR profiles can be combined using the product rule. JF - Journal of forensic sciences SN - 1556-4029 TI - Texas Population Substructure and Its Impact on Estimating the Rarity of Y STR Haplotypes from DNA Evidence* KW - 17_strs KW - african-american KW - european-american KW - hispanic-american KW - texas KW - y AU - Budowle, Bruce AU - Ge, Jianye AU - Aranda, Xavier AU - Planz, John AU - Eisenberg, Arthur AU - Chakraborty, Ranajit PY - 2009/07/15/ UR - http://dx.doi.org/10.1111/j.1556-4029.2009.01105.x ER -