Ayest's sequence [36 articles] Export

Recent papers added to Ayest's library classified by the tag sequence. You can also see everyone's sequence.

	Asymptotically increasing compliance of genomes with Chargaff's second parity rules through inversions and inverted transpositions. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 47. (21 November 2006), pp. 17828-17833. by G. Albrecht-Buehler posted to bioinformatic inversion sequence by Ayest on 2008-12-18 10:04:37 as
	SIC: A tool to detect short inverted segments in a biological sequence. [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3669-3671. by D. Robelin, H. Richard, B. Prum posted to bioinformatic inversion markov sequence by Ayest on 2008-12-07 17:47:00 as
	seq++: analyzing biological sequences with a range of Markov-related models [My Copy] Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2783-2784. by Vincent Miele, Pierre-Yves Bourguignon, David Robelin, Gregory Nuel, Hugues Richard posted to bioinformatic markov sequence by Ayest on 2008-12-07 17:46:18 as
	Prediction of complete gene structures in human genomic DNA [My Copy] Journal of Molecular Biology, Vol. 268, No. 1. (25 April 1997), pp. 78-94. by C. Burge posted to bioinformatic hmm sequence by Ayest on 2008-11-29 11:11:42 as along with 13 people and 2 groups viren4388 rshe jmartin49 pcahan1 indigoviolet kaspermunch dullhunk dquest wenhan GustavoLacerda nicholso nklee bandrewfox Bioinformatics EisenLab
	Microbial gene identification using interpolated Markov models [My Copy] Nucl. Acids Res., Vol. 26, No. 2. (15 January 1998), pp. 544-548. by S. L. Salzberg, A. L. Delcher, S. Kasif, O. White posted to bioinformatic hmm sequence by Ayest on 2008-11-29 11:08:50 as along with 7 people and 1 group tfuji ziquje gg bnchakraborty bluto jguinney wenhan MBLAB
	Improved microbial gene identification with GLIMMER. [My Copy] Nucleic acids research, Vol. 27, No. 23. (1 December 1999), pp. 4636-4641. by A. L. Delcher, D. Harmon, S. Kasif, O. White, S. L. Salzberg posted to bioinformatic hmm sequence by Ayest on 2008-11-29 11:06:25 as along with 8 people azazello rneches tfuji nedwards ziquje dquest gelack wenhan
	Modèles de Markov parcimonieux : sélection de modèle et estimation [My Copy] Proceedings of Journees Ouvertes Biologie Informatique (2004) by P. Y. Bourguignon, D. Robelin posted to markov sequence by Ayest on 2007-04-25 09:41:29 as
	Hidden Markov Model Variants and their Application. [My Copy] BMC Bioinformatics, Vol. 7 Suppl 2 (26 September 2006) by Stephen Winters-Hilt posted to markov sequence by Ayest on 2006-11-27 08:15:11 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Adding sequence context to a Markov background model improves the identification of regulatory elements [My Copy] Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2870-2875. by Nak-Kyeong Kim, Kannan Tharakaraman, John L. Spouge posted to bioinformatic markov sequence by Ayest on 2006-11-17 15:46:48 as along with 1 person hendrik85
	A Heuristic Bayesian Method for Segmenting DNA Sequence Alignments and Detecting Evidence for Recombination and Gene Conversion [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 5, No. 1. (2006) by Anna Kedzierska, Dirk Husmeier posted to mcmc recombination sequence by Ayest on 2006-10-30 08:38:44 as
	Statistical signals in bioinformatics. [My Copy] Proc Natl Acad Sci U S A (12 September 2005) by Samuel Karlin posted to bioinformatic sequence statistic by Ayest on 2006-10-27 16:11:54 as along with 5 people and 2 groups aalibes bsmagic aaronsmith quianominorleo ardalby Bioinformatics bioinplant
	Numerical solutions for patterns statistics on Markov chains. [My Copy] Stat Appl Genet Mol Biol, Vol. 5, No. 1. (2006) by G. Nuel posted to markov sequence statistic by Ayest on 2006-10-23 12:54:13 as
	Detecting local high-scoring segments: a first-stage approach for genome-wide association studies. [My Copy] Stat Appl Genet Mol Biol, Vol. 5, No. 1. (2006) by M. Guedj, D. Robelin, M. Hoebeke, M. Lamarine, J. Wojcik, G. Nuel posted to sequence statistic by Ayest on 2006-10-23 12:34:44 as
	Pattern statistics on Markov chains and sensitivity to parameter estimation [My Copy] Algorithms for Molecular Biology, Vol. 1 (17 October 2006), 17. by Gregory Nuel posted to markov sequence by Ayest on 2006-10-18 08:17:38 as
	Statistical significance in biological sequence analysis. [My Copy] Brief Bioinform, Vol. 7, No. 1. (March 2006), pp. 2-24. by A. Y. Mitrophanov, M. Borodovsky posted to alignment reviews sequence statistic by Ayest on 2006-09-26 13:14:45 as along with 4 people druvus treangen xili03 wenhan
	Universal codes as a basis for nonparametric testing of serial independence for time series [My Copy] Journal of Statistical Planning and Inference, Vol. 136, No. 12. (1 December 2006), pp. 4119-4128. by Boris Ryabko, Jaakko Astola posted to markov sequence statistic by Ayest on 2006-08-31 12:44:27 as
	DNA sequence drives nucleosome occupancy of yeast promoters [My Copy] JOBIM (2006) by Vincent Miele, Cédric Vaillant, Yves D’aubenton-Carafa, David Robelin, Bernard Prum, Claude Thermes posted to bioinformatic sequence by Ayest on 2006-07-12 13:08:57 as
	Detecting interspecific recombination with a pruned probabilistic divergence measure. [My Copy] Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 1797-1806. by D. Husmeier, F. Wright, I. Milne posted to bioinformatic sequence statistic by Ayest on 2006-06-11 19:24:32 as along with 1 person aprasad
	Origin and properties of non-coding ORFs in the yeast genome. [My Copy] Nucleic Acids Res, Vol. 27, No. 17. (1 September 1999), pp. 3503-3509. by P. Mackiewicz, M. Kowalczuk, A. Gierlik, M. R. Dudek, S. Cebrat posted to evolution sequence by Ayest on 2006-06-11 11:29:16 as
	Genome sequence of Yersinia pestis, the causative agent of plague. [My Copy] Nature, Vol. 413, No. 6855. (4 October 2001), pp. 523-527. by J. Parkhill, B. W. Wren, N. R. Thomson, et al.R. W. Titball, M. T. Holden, M. B. Prentice, M. Sebaihia, K. D. James, C. Churcher, K. L. Mungall, S. Baker, D. Basham, S. D. Bentley, K. Brooks, A. M. Cerdeño-Tárraga, T. Chillingworth, A. Cronin, R. M. Davies, P. Davis, G. Dougan, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, A. V. Karlyshev, S. Leather, S. Moule, P. C. Oyston, M. Quail, K. Rutherford, M. Simmonds, J. Skelton, K. Stevens, S. Whitehead, B. G. Barrell posted to bioinformatic sequence by Ayest on 2006-06-11 11:25:39 as along with 2 people and 1 group AaronDarling devender FlowCytometry
	Polarisation of prokaryotic chromosomes. [My Copy] Curr Opin Microbiol, Vol. 6, No. 2. (April 2003), pp. 101-108. by J. R. Lobry, J. M. Louarn posted to bioinformatic evolution sequence by Ayest on 2006-06-11 11:21:48 as
	Maximum scan score-type statistics [My Copy] Statistics & Probability Letters, Vol. 76, No. 13. (15 July 2006), pp. 1316-1322. by Joseph Glaz, Zhenkui Zhang posted to extreme_value sequence statistic by Ayest on 2006-06-11 11:13:35 as
	Optimized mixed Markov models for motif identification [My Copy] BMC Bioinformatics, Vol. 7 (02 June 2006), 279. by Weichun Huang, David M. Umbach, Uwe Ohler, Leping Li posted to bioinformatic markov sequence by Ayest on 2006-06-08 10:39:26 as along with 1 person nklee
	A New Order Estimator for Fixed and Variable Length Markov Models with Applications to DNA Sequence Similarity [My Copy] tatistical Applications in Genetics and Molecular Biology, Vol. 5, No. 1., 8. by Daniel Dalevi, Devdatt Dubhashi, Malte Hermansson posted to markov sequence by Ayest on 2006-03-20 14:32:27 as
	Refinement of optical map assemblies (original paper). [My Copy] Bioinformatics (24 February 2006) by Anton Valouev, Yu Zhang, David C C. Schwartz, Michael S S. Waterman posted to bioinformatic evolution markov sequence by Ayest on 2006-03-05 19:39:32 as
	Sequence-Dependent Base Pair Opening in DNA Double Helix. [My Copy] Biophys J (24 February 2006) by Andrew Krueger, Ekaterina Protozanova, Maxim D D. Frank-Kamenetskii posted to bioinformatic sequence by Ayest on 2006-03-05 19:37:17 as along with 1 person operon
	Bayesian classifiers for detecting HGT using fixed and variable order markov models of genomic signatures [My Copy] Bioinformatics, Vol. 22, No. 5. (1 March 2006), pp. 517-522. by Daniel Dalevi, Devdatt Dubhashi, Malte Hermansson posted to bioinformatic markov sequence by Ayest on 2006-02-22 08:16:34 as along with 2 people azazello karfunkel
	Detecting overlapping coding sequences in virus genomes. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (16 February 2006) by Andrew E. Firth, Chris M. Brown posted to alignment bioinformatic sequence by Ayest on 2006-02-20 10:10:14 as along with 1 person and 1 group vwchan beta
	Homology-dependent methylation in primate repetitive DNA. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 15. (12 April 2005), pp. 5471-5476. by J. Meunier, A. Khelifi, V. Navratil, L. Duret posted to cpg evolution sequence by Ayest on 2006-02-18 17:13:58 as
	Analysing grouping of nucleotides in DNA sequences using lumped processes constructed from Markov chains. [My Copy] J Math Biol (7 February 2006) by Yann Guédon, Yves d'Aubenton-Carafa, Claude Thermes posted to markov sequence by Ayest on 2006-02-13 09:29:58 as
	Closed-form solutions for continuous time random walks on finite chains. [My Copy] Phys Rev Lett, Vol. 95, No. 9. (26 August 2005) by O. Flomenbom, J. Klafter posted to markov semi_markov sequence by Ayest on 2005-10-24 08:57:21 as
	SIC: a tool to detect short inverted segments in a biological sequence [My Copy] Nucl. Acids. Res., Vol. 31, No. 13. (2003), pp. 3669-3671. by David Robelin, Hugues Richard, Bernard Prum posted to bioinformatic dna inversion markov motif sequence by Ayest on 2005-09-10 19:11:51 as
	Comparison of Biosequences [My Copy] Advances in Applied Mathematics, Vol. 2 (1981), pp. 482-489. by T. F. Smith, M. S. Waterman posted to alignment bibtex-import sequence by Ayest on 2005-09-10 19:11:50 as
	A general method applicable to the search for similarities in the amino acid sequence of two proteins. [My Copy] J. Mol. Biol., Vol. 48 (1970), pp. 443-453. by S. B. Needleman, C. D. Wunsch posted to alignment bibtex-import sequence by Ayest on 2005-09-10 19:11:50 as
	Combinatorial approaches to finding subtle signals in DNA sequences. [My Copy] (August 2000), pp. 269-278. by P. A. Pevzner, Sing H. Sze posted to bibtex-import dna motif sequence by Ayest on 2005-09-10 19:11:48 as
	Detecting Short Inverted Segments in a Biological Sequence [My Copy] In European Conference on Computationnal Biology (2003), pp. 41-43. by David Robelin, Bernard Prum posted to bioinformatic dna inversion markov sequence by Ayest on 2005-09-10 19:11:48 as

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bibtex-import	112
bioinformatic	68
statistic	56
software	51
snp	49
qtl	43
sequence	36
markov	32
reviews	30
linkage	26
evolution	24
mrf	23
association	20
haplotype	20
alignment	18
detection	18
error	13
microarray	13
pedigree	12
recombination	12
spatial	12
mapping	10
medical	10
genetic	8
hmm	8
lgc	8
r	8
animal	7
whole_genome	7
epidemiology	6
inversion	6
marker	6
image	5
mcmc	5
porc	5
probability	5
tma	5
variables_selection	5
bayesian_network	4
database	4
network	4
partition_function	4
polymorphism	4
classification	3
computation	3
convergence_rate	3
cytogenetic	3
data	3
dna	3
eqtl	3
jc_pliage	3
local_score	3
map	3
pooling	3
population_genetic	3
process	3
regression	3
resequencage	3
bovin	2
cancer	2
coupling	2
ecology	2
epigenetic	2
epistasis	2
extreme_value	2
gaussian	2
genetical_transfert	2
ibd	2
ld	2
motif	2
multiqtl	2
pathway	2
quantitative_genetic	2
selection	2
variational	2
visualization	2
anr	1
application	1
bia	1
chicken	1
coalescent	1
contour	1
cow	1
cpg	1
est	1
expression	1
genomic_selection	1
graph	1
molecular	1
multitest	1
nutrition	1
ovins	1
population	1
prp	1
rabbit	1
rna	1
saga	1
scan	1
selection_genomic	1
semi_markov	1
splicing	1
viterbi	1

Ayest's sequence [36 articles] Export

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