BragilMassoud's db [13 articles] Export

Recent papers added to BragilMassoud's library classified by the tag db. You can also see everyone's db.

	The Universal Protein Resource (UniProt): an expanding universe of protein information. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by C. H. Wu, R. Apweiler, A. Bairoch, et al.D. A. Natale, W. C. Barker, B. Boeckmann, S. Ferro, E. Gasteiger, H. Huang, R. Lopez, M. Magrane, M. J. Martin, R. Mazumder, C. O'Donovan, N. Redaschi, B. Suzek posted to db protein sequence by BragilMassoud on 2006-07-19 23:48:00 as along with 8 people niallhaslam sgoetz miguel anwazo dgront Haggan cdallett cjeans
	3DinSight: an integrated relational database and search tool for the structure, function and properties of biomolecules. [My Copy] Bioinformatics, Vol. 14, No. 2. (1998), pp. 188-195. by J. An, T. Nakama, Y. Kubota, A. Sarai posted to affinity db docking ligands protein structure by BragilMassoud on 2006-07-17 16:57:33 as
	PDBSprotEC: a Web-accessible database linking PDB chains to EC numbers via SwissProt. [My Copy] Bioinformatics, Vol. 20, No. 6. (12 April 2004), pp. 986-988. by A. C. Martin posted to db protein structure by BragilMassoud on 2006-07-09 19:15:40 as
	sc-PDB: an annotated database of druggable binding sites from the Protein Data Bank. [My Copy] J Chem Inf Model, Vol. 46, No. 2. (r 2006), pp. 717-727. by E. Kellenberger, P. Muller, C. Schalon, G. Bret, N. Foata, D. Rognan posted to cavities db docking screening by BragilMassoud on 2006-05-11 21:22:22 as along with 6 people and 1 group caporaso schlauchi daevans ramensky sim82 nickolay biomedical-nlp
	Communication and re-use of chemical information in bioscience. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by P. Murray-Rust, J. B. Mitchell, H. S. Rzepa posted to db open_access by BragilMassoud on 2006-05-04 14:28:24 as along with 2 people hpiwowar ucbcjbm
	A new test set for validating predictions of protein-ligand interaction. [My Copy] Proteins, Vol. 49, No. 4. (1 December 2002), pp. 457-471. by J. W. Nissink, C. Murray, M. Hartshorn, M. L. Verdonk, J. C. Cole, R. Taylor posted to db docking gold by BragilMassoud on 2006-01-18 16:35:15 as along with 4 people and 1 group flbarroso yongzhao blackbart ramensky TSRI_MGL
	ChemDB: a public database of small molecules and related chemoinformatics resources. [My Copy] Bioinformatics (20 September 2005) by Jonathan Chen, S Joshua J. Swamidass, Yimeng Dou, Jocelyne Bruand, Pierre Baldi posted to db ligands by BragilMassoud on 2005-09-23 10:07:48 as along with 1 person andytseng
	Data mining and machine learning techniques for the identification of mutagenicity inducing substructures and structure activity relationships of noncongeneric compounds. [My Copy] J Chem Inf Comput Sci, Vol. 44, No. 4. (g 2004), pp. 1402-1411. by C. Helma, T. Cramer, S. Kramer, L. De Raedt posted to db ligands machinelearning pharmacology by BragilMassoud on 2005-09-14 14:07:33 as along with 2 people jxl LamBras
	Decoys for docking. [My Copy] J Med Chem, Vol. 48, No. 11. (2 June 2005), pp. 3714-3728. by A. P. Graves, R. Brenk, B. K. Shoichet posted to db docking ligands screening by BragilMassoud on 2005-07-04 15:49:45 as along with 8 people and 4 groups csrocha oteri simranjeet dgruiz yongzhao sangeetha insilico blackbart Bioinformatics TSRI_MGL insilicodrug Computer Aided Drug Design
	Searching techniques for databases of two- and three-dimensional chemical structures. [My Copy] J Med Chem, Vol. 48, No. 13. (30 June 2005), pp. 4183-4199. by P. Willett posted to db graphs ligands screening by BragilMassoud on 2005-07-04 15:47:18 as along with 1 person schlauchi
	Binding MOAD (Mother Of All Databases). [My Copy] Proteins (21 June 2005) by Liegi Hu, Mark L L. Benson, Richard D D. Smith, Michael G G. Lerner, Heather A A. Carlson posted to affinity db docking energyfunctions ligands protein structure by BragilMassoud on 2005-06-24 14:16:20 as along with 5 people and 10 groups sangeetha shantanu caporaso papatonyhill higueruelo structural_bioinformatics MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology biomedical-nlp insilicodrug
	The PDBbind database: collection of binding affinities for protein-ligand complexes with known three-dimensional structures. [My Copy] J Med Chem, Vol. 47, No. 12. (3 June 2004), pp. 2977-2980. by R. Wang, X. Fang, Y. Lu, S. Wang posted to db docking pharmacology screening structure by BragilMassoud on 2005-05-08 17:41:55 as along with 1 person nachtalp
	Ligand Depot: a data warehouse for ligands bound to macromolecules [My Copy] Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2153-2155. by Zukang Feng, Li Chen, Himabindu Maddula, et al.Ozgur Akcan, Rose Oughtred, Helen M. Berman, John Westbrook posted to db docking pharmacology protein structure by BragilMassoud on 2005-05-08 17:31:42 as along with 5 people flbarroso reyez nachtalp bicko nickolay

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docking	175
structure	91
protein	89
screening	84
pharmacology	43
energyfunctions	42
review	38
math	35
nma	25
affinity	22
forcefield	21
kinases	21
ligands	20
flexible_protein	18
minimization	18
robert	17
db	13
hts	13
md	13
visualization	13
internal_coordinates	12
alignment	11
superposition	11
actin	10
electrostatics	9
gold	9
evolution	8
kinesin	7
ligand	7
dehydron	6
design	6
solvation	6
cavities	5
flexx	5
machinelearning	5
mc	5
specificity	5
statistics	5
stun	5
surflex	5
conformations	4
evotrace	4
glide	4
metabolomics	4
pts	4
qc	4
slide	4
antibiotics	3
autodock	3
benchmark	3
benchmarks	3
brain	3
comment	3
comparison	3
est	3
fingerprints	3
graphs	3
inversescreening	3
physics	3
ribbons	3
roc	3
sasa	3
textmining	3
abinitio	2
born	2
cancer	2
chemogenomics	2
consensus	2
database	2
energy_functions	2
enzyme	2
enzymes	2
ga	2
geneexpression	2
graph	2
ludi	2
pharmacogenetics	2
pharmacophore	2
quaternion	2
ring_flipping	2
similarity	2
tox	2
1acj	1
adme	1
affinitiy	1
algorithm	1
antidepressants	1
antoptimization	1
bench_errors	1
bias	1
clustering	1
conforamtions	1
conformaations	1
conformation	1
denovo	1
density	1
dock	1
dokcing	1
ehits	1
entropy	1
fragmentation	1
fragments	1
framgents	1
geometry	1
ghb	1
glamdock	1
gpu	1
hammerhead	1
hbond	1
hom_model	1
hond	1
hydration	1
inverse_screening	1
kinase	1
language	1
ligandfit	1
loop_quantum	1
mechanics	1
metal	1
networks	1
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open_access	1
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optimization	1
pain	1
pdk1	1
pharmacolgy	1
pharmacologyy	1
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psychology	1
qsar	1
qxp	1
random	1
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rss	1
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BragilMassoud's db [13 articles] Export

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