LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures Export

@article{citeulike:4327369, abstract = {Summary: LS-SNP/PDB is a new WWW resource for genome-wide annotation of human non-synonymous (amino-acid changing) SNPs. It serves high quality protein graphics rendered with UCSF Chimera molecular visualization software. The system is kept up-to-date by an automated, high-throughput build pipeline that systematically maps human nsSNPs onto Protein Data Bank structures and annotates several biologically relevant features. Availability: LS-SNP/PDB is available at http://ls-snp.icm.jhu.edu/lssnp-pdb and via links from the Protein Data Bank (PDB) Biology and Chemistry tabs, UCSC Genome Browser Gene Details and SNP Details pages and PharmGKB Gene Variants Downloads/Cross-References pages. Contact: karchin@jhu.edu Supplementary Information: Supplementary information is available at Bioinformatics online. 10.1093/bioinformatics/btp242}, author = {Ryan, Michael and Diekhans, Mark and Lien, Stephanie and Liu, Yun and Karchin, Rachel}, citeulike-article-id = {4327369}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btp242}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/19369493}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=19369493}, day = {15}, doi = {10.1093/bioinformatics/btp242}, journal = {Bioinformatics}, keywords = {pdb, snps, visualization}, month = {April}, pages = {btp242+}, posted-at = {2009-04-16 17:53:02}, priority = {2}, title = {LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures}, url = {http://dx.doi.org/10.1093/bioinformatics/btp242}, year = {2009} }

TY - JOUR ID - citeulike:4327369 L3 - citeulike-article-id:4327369 N2 - Summary: LS-SNP/PDB is a new WWW resource for genome-wide annotation of human non-synonymous (amino-acid changing) SNPs. It serves high quality protein graphics rendered with UCSF Chimera molecular visualization software. The system is kept up-to-date by an automated, high-throughput build pipeline that systematically maps human nsSNPs onto Protein Data Bank structures and annotates several biologically relevant features. Availability: LS-SNP/PDB is available at http://ls-snp.icm.jhu.edu/lssnp-pdb and via links from the Protein Data Bank (PDB) Biology and Chemistry tabs, UCSC Genome Browser Gene Details and SNP Details pages and PharmGKB Gene Variants Downloads/Cross-References pages. Contact: karchin@jhu.edu Supplementary Information: Supplementary information is available at Bioinformatics online. 10.1093/bioinformatics/btp242 JF - Bioinformatics TI - LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures SP - btp242 KW - pdb KW - snps KW - visualization AU - Ryan, Michael AU - Diekhans, Mark AU - Lien, Stephanie AU - Liu, Yun AU - Karchin, Rachel PY - 2009/04/15/ UR - http://dx.doi.org/10.1093/bioinformatics/btp242 ER -