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Cristiano's library [28 articles]

Recent papers added to Cristiano's library ordered by importance.
  • Protein heat capacity: inconsistencies in the current view of cold denaturation
    Biophysical Chemistry, Vol. 76, No. 3. (22 February 1999), pp. 219-227.
    by B Hallerbach, Hinz
    posted to cold-denaturation hydrophobicity secondary-structures thermodynamics by Cristiano on 2008-01-08 19:47:31 as *****
  • Recent progress in understanding hydrophobic interactions.
    Proc Natl Acad Sci U S A, Vol. 103, No. 43. (24 October 2006), pp. 15739-15746.
    by EE Meyer, KJ Rosenberg, J Israelachvili
    posted to hydrophobicity review by Cristiano on 2007-12-11 21:20:44 as ***** along with 3 people and 1 group hsekiguc sobolevnrm paulschlesinger baker-group
  • Observation of Immobilized Water Molecules around Hydrophobic Groups
    Physical Review Letters, Vol. 99, No. 14. (2007)
    by YLA Rezus, HJ Bakker
    posted to experiment hydrophobicity thermodynamics by Cristiano on 2007-12-11 21:14:08 as ***** along with 3 people and 1 group dchen sobolevnrm Diego_Prada baker-group
  • Is cold the new hot? Elevated ubiquitin-conjugated protein levels in tissues of Antarctic fish as evidence for cold-denaturation of proteins in vivo
    Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, Vol. 177, No. 8. (24 November 2007), pp. 857-866.
    by Anne Todgham, Elizabeth Hoaglund, Gretchen Hofmann
    posted to cold-denaturation proteins by Cristiano on 2007-12-15 23:36:13 as ****
  • Role of Protein-Water Hydrogen Bond Dynamics in the Protein Dynamical Transition
    Physical Review Letters, Vol. 88, No. 13. (14 March 2002), 138101.
    by M Tarek, DJ Tobias
    posted to folding hbproject proteins by Cristiano on 2007-04-10 23:00:34 as ****
  • Theoretical study of interaction of winter flounder antifreeze protein with ice
    Protein Sci, Vol. 13, No. 6. (1 June 2004), pp. 1524-1537.
    by Alexander Jorov, Boris S Zhorov, Daniel S Yang
    posted to freezing proteins by Cristiano on 2007-12-15 23:37:21 as ***
  • Protein stability promotes evolvability
    PNAS, Vol. 103, No. 15. (11 April 2006), pp. 5869-5874.
    by Jesse D Bloom, Sy T Labthavikul, Christopher R Otey, Frances H Arnold
    posted to designability proteins by Cristiano on 2006-11-30 21:43:39 as *** along with 10 people and 2 groups rklancer Retchless lna Einat penka cmm redelings BioNica wilbur cdeane structural_bioinformatics FAB-lab
  • Modeling protein thermodynamics and fluctuations at the mesoscale
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 4. (2006)
    by Naoko Nakagawa, Michel Peyrard
    posted to proteins thermodynamics by Cristiano on 2006-11-27 18:32:32 as ***
  • notes Exploring the energy landscape of model proteins: A metric criterion for the determination of dynamical connectivity
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 72, No. 5. (2005)
    by Lorenzo Bongini, Roberto Livi, Antonio Politi, Alessandro Torcini
    posted to landscape metastability proteins by Cristiano on 2006-11-27 18:26:29 as *** along with 1 person gane5h
  • Curvature of the Energy Landscape and Folding of Model Proteins
    Physical Review Letters, Vol. 97, No. 21. (2006)
    by Lorenzo N Mazzoni, Lapo Casetti
    posted to folding landscape proteins by Cristiano on 2006-11-27 17:59:48 as *** along with 1 person gane5h
  • Fluctuation-Dissipation Theorem for Metastable Systems
    Physical Review Letters, Vol. 90, No. 13. (2003)
    by G Baez, H Larralde, F Leyvraz, Mendez RA Sanchez
    posted to fluctuation-dissipation metastability non-equilibrium theory by Cristiano on 2006-11-13 17:06:01 as ***
  • Direct calculation of liquid--vapor phase equilibria from transition matrix Monte Carlo simulation
    The Journal of Chemical Physics, Vol. 118, No. 22. (2003), pp. 9915-9925.
    by Jeffrey R Errington
    posted to lennard-johns phase-transition thermodynamics by Cristiano on 2008-01-28 20:05:08 as **
  • Protein thermal stability, hydrogen bonds, and ion pairs.
    J Mol Biol, Vol. 269, No. 4. (20 June 1997), pp. 631-643.
    by G Vogt, S Woell, P Argos
    posted to proteins review secondary-structures thermodynamics by Cristiano on 2008-01-23 22:13:43 as ** along with 1 person gisle
  • Submillisecond kinetics of protein folding
    Current Opinion in Structural Biology, Vol. 7, No. 1. (February 1997), pp. 10-14.
    by William A Eaton, Victor Munoz, Peggy A Thompson, Chi-Kin Chan, James Hofrichter
    posted to folding hbproject hydrophobicity proteins review secondary-structures by Cristiano on 2008-01-23 17:03:09 as **
  • Review: Protein Secondary Structure Prediction Continues to Rise
    Journal of Structural Biology, Vol. 134, No. 2-3. (May 2001), pp. 204-218.
    by Burkhard Rost
    posted to proteins review secondary-structures structure-prediction by Cristiano on 2008-01-23 16:45:26 as ** along with 1 person granujilla
  • Context-dependent secondary structure formation of a designed protein sequence
    Nature, Vol. 380, No. 6576. (25 April 1996), pp. 730-734.
    by Daniel L Minor, Peter S Kim
    posted to folding hbproject proteins secondary-structures by Cristiano on 2008-01-23 16:41:01 as **
  • Mechanistic Elements of Protein Cold Denaturation
    J. Phys. Chem. B (9 January 2008)
    by CF Lopez, RK Darst, PJ Rossky
    posted to cold-denaturation hydrophobicity proteins theory thermodynamics by Cristiano on 2008-01-15 16:36:41 as ** along with 2 people and 1 group samjlord sobolevnrm baker-group
  • Cold-Denatured Ensemble of Apomyoglobin: Implications for the Early Steps of Folding
    J. Phys. Chem. B, Vol. 102, No. 10. (5 March 1998), pp. 1806-1819.
    by J Sabelko, J Ervin, M Gruebele
    posted to cold-denaturation experiment hydrophobicity proteins thermodynamics by Cristiano on 2008-01-15 16:35:45 as **
  • Alternative hydrogen bond implementations produce opposite effects on collapse cooperativity of lattice homopolypeptide models
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 76, No. 5. (2007)
    by Gustavo MN Fleury, Marco AA Barbosa, Antônio
    posted to hbproject hydrophobicity proteins secondary-structures by Cristiano on 2007-12-20 21:58:00 as **
  • The Control of Protein Stability and Association by Weak Interactions with Water: How Do Solvents Affect These Processes? - Annual Review of Biophysics and Biomolecular Structure, 22(1):67 - First Page Image
    Annual Review of Biophysics and Biomolecular Structure, Vol. 22 (1993), pp. 67-97.
    by SN Timasheff
    posted to hbproject hydrophobicity proteins secondary-structures by Cristiano on 2007-12-20 21:57:23 as **
  • Relationship between intramolecular hydrogen bonding and solvent accessibility of side-chain donors and acceptors in proteins
    FEBS Letters, Vol. 554, No. 3. (20 November 2003), pp. 389-393.
    by Alexander V Efimov, Evgenii V Brazhnikov
    posted to hbproject hydrophobicity proteins secondary-structures by Cristiano on 2007-12-20 21:55:04 as **
  • Compact phases of polymers with hydrogen bonding
    Physical Review E, Vol. 67, No. 2. (26 February 2003), 021805.
    by Antonio Trovato, Jesper Ferkinghoff-Borg, Mogens H Jensen
    posted to hydrophobicity proteins secondary-structures by Cristiano on 2007-12-20 21:51:07 as **
  • Anomalous Diffusion in Folding Dynamics of Minimalist Protein Landscape
    Physical Review Letters, Vol. 99, No. 23. (2007)
    by Yasuhiro Matsunaga, Chun B Li, Tamiki Komatsuzaki
    posted to fluctuation-dissipation folding landscape proteins by Cristiano on 2007-12-12 17:36:32 as ** along with 2 people hsekiguc paulschlesinger
  • Torque Detection using Brownian Fluctuations
    Physical Review Letters, Vol. 97, No. 21. (2006)
    by Giovanni Volpe, Dmitri Petrov
    posted to fluctuation-dissipation non-equilibrium by Cristiano on 2006-11-27 18:33:01 as ** along with 2 people and 1 group dchen rodney Kopelman_Group
  • Secondary structures in long compact polymers
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 5. (2006)
    by Richard Oberdorf, Allison Ferguson, Jesper L Jacobsen, Jane Kondev
    posted to designability proteins secondary-structures compact-lattices by Cristiano on 2006-11-13 17:14:19 as **
  • Metastability, nucleation, and noise-enhanced stabilization out of equilibrium
    Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 5. (2006)
    by Pablo I Hurtado, J Marro, PL Garrido
    posted to ising metastability non-equilibrium nucleation theory by Cristiano on 2006-11-13 17:06:49 as **
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