CiteULike: Diego_Prada's Roux:B [3 articles]

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free_energy	116
chapt_cmn	72
networks	66
short-peptides	63
hexapeptide	48
plos	47
protein_folding	46
md	41
communities	38
cmn	35
markov	35
amino	34
stochastic_processes	34
gnm	32
protein_dynamics	31
pca	30
transition_path	28
methods	28
amyloids	27
dialanine	27
md_history	27
complex_systems	21
articulo	21
aux	21
coarse-grained	18
hp_model	16
beta-hairpin	16
proteins	15
dpca	15
transition_states	15
reaction_paths	14
force-fields	13
water	13
chapt_amino	12
statistical_mechanics	12
langevin	10
energy_landscape	9
problems_fel_dof	9
pes_based	9
glass_transition	8
first_passage	8
experimental	8
clustering	8
markov_state_models	7
funnels	7
rmsd	6
struct_decorr	6
kramers	6
active_site	6
secondary_structure	6
sampling	6
mutual-information	6
hot	5
review	5
glycine	5
collective_motions	5
mios	5
transition_state_theory	5
out_of_equilibrium	5
allostery	4
mc	4
kinetic_models	4
entropy	4
qha	4
percolation	4
alanine	3
dihedral	3
rol_nodes	3
work_theorem	3
statistics	2
information	2
conformational_entropy	2
bayesian_analysis	2
temperature_dependence	2
t_dependence	2
ala5	2
probability_distributions	2
wavelets	2
non_markovian	2
energy_landscapes	2
irreversibility	2
leas_action	2
fca	2
go	2
fibril_formation	1
aggregation	1
coarse-grained_potentials	1
pendiente	1
flagellum	1
protein_flexibility	1
information_theory	1
mpi	1
relaxation_processes	1
chain_interactions	1
statistical_models	1
enkaphalin	1
opls	1
lj_clusters	1
collective_variable	1
hurst_exponent	1
nonequilibrium	1
latex	1
discrete_breathers	1
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fre	1

	Mapping the conformational transition in Src activation by cumulating the information from multiple molecular dynamics trajectories [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 10. (10 March 2009), pp. 3776-3781. by Sichun Yang, Nilesh K. Banavali, BenoÃ®t Roux posted to free_energy collective_motions cmn allostery active_site by Diego_Prada on 2009-09-17 19:28:04 as along with 7 people and 2 groups anuragsethi bmduggan allmensch guhjy sobolevnrm barry jmccammon baker-group McCammon
	All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins† [My Copy] The Journal of Physical Chemistry B, Vol. 102, No. 18. (1 April 1998), pp. 3586-3616. by A. D. MacKerell, D. Bashford, Bellott, et al.R. L. Dunbrack, J. D. Evanseck, M. J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph-McCarthy, L. Kuchnir, K. Kuczera, F. T. K. Lau, C. Mattos, S. Michnick, T. Ngo, D. T. Nguyen, B. Prodhom, W. E. Reiher, B. Roux, M. Schlenkrich, J. C. Smith, R. Stote, J. Straub, M. Watanabe, J. Wiorkiewicz-Kuczera, D. Yin, M. Karplus posted to force-fields by Diego_Prada on 2009-05-01 20:39:49 as along with 12 people jmparks dsmueller rpetrenko jrperillaj oceanwind dfgreen mkrishna timg dimka ttjoseph papatonyhill ssomani
	Energetics of ion conduction through the K+ channel. [My Copy] Nature, Vol. 414, No. 6859. (1 November 2001), pp. 73-77. by S. Bernèche, B. Roux posted to md md_history by Diego_Prada on 2009-04-05 18:18:36 as along with 2 people and 1 group dimka brocktice TulaneCEP

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