Diego_Prada's Wales:DJ [18 articles] Export

Recent papers posted to Diego_Prada's library by the author Wales:DJ. You can also see everyone's Wales:DJ.

	Pathways for Conformational Change in Nitrogen Regulatory Protein C from Discrete Path Sampling [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 8. (1 February 2008), pp. 2456-2465. by Mey Khalili, David J. Wales posted to first_passage free-energy protein_dynamics qha reaction_paths transition_path transition_states by Diego_Prada on 2009-07-02 12:02:29 as
	Refined kinetic transition networks for the GB1 hairpin peptide [My Copy] Phys. Chem. Chem. Phys., Vol. 11, No. 18. (2009), pp. 3341-3354. by Joanne M. Carr, David J. Wales posted to beta-hairpin first_passage free-energy hexapeptide protein_dynamics protein_folding qha reaction_paths short-peptides transition_path transition_states by Diego_Prada on 2009-07-02 11:55:15 as
	Calculating rate constants and committor probabilities for transition networks by graph transformation [My Copy] The Journal of Chemical Physics, Vol. 130, No. 20. (2009), 204111. by David J. Wales posted to reaction_paths transition_path transition_states by Diego_Prada on 2009-06-09 11:29:56 as
	Energy Landscapes: From Clusters to Biomolecules [My Copy] Advances in Chemical Physics, Vol. 115 (2000), pp. 1-111. by David J. Wales, Jonathan P. Doye, Mark A. Miller, Paul N. Mortenson, Tiffany R. Walsh edited by I. Prigogine, Stuart A. Rice posted to chapt_cmn complex_systems free-energy plos by Diego_Prada on 2009-05-05 16:07:19 as
	Folding Pathways and Rates for the Three-Stranded β-Sheet Peptide Beta3s using Discrete Path Sampling [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 29. (1 July 2008), pp. 8760-8769. by Joanne M. Carr, David J. Wales posted to beta-hairpin free-energy hexapeptide protein_folding short-peptides by Diego_Prada on 2009-04-30 12:10:50 as
	Free energy surfaces from an extended harmonic superposition approach and kinetics for alanine dipeptide [My Copy] Chemical Physics Letters, Vol. 466, No. 4-6. (04 December 2008), pp. 105-115. by Birgit Strodel, David J. Wales posted to amino articulo coarse-grained dialanine free-energy hexapeptide statistical_mechanics by Diego_Prada on 2009-03-07 12:18:52 as
	The free energy landscape and dynamics of met-enkephalin [My Copy] The Journal of Chemical Physics, Vol. 119, No. 18. (2003), pp. 9947-9955. by David A. Evans, David J. Wales posted to chapt_cmn free-energy hexapeptide markov plos by Diego_Prada on 2009-02-17 15:55:06 as
	Energy landscape of a model protein [My Copy] The Journal of Chemical Physics, Vol. 111, No. 14. (1999), pp. 6610-6616. by Mark A. Miller, David J. Wales posted to coarse-grained hp_model by Diego_Prada on 2008-08-20 10:44:26 as
	On potential energy surfaces and relaxation to the global minimum [My Copy] The Journal of Chemical Physics, Vol. 105, No. 18. (1996), pp. 8428-8445. by Jonathan P. K. Doye, David J. Wales posted to free-energy hp_model protein_folding by Diego_Prada on 2008-08-20 10:37:38 as
	Energy landscapes, global optimization and dynamics of the polyalanine Ac(ala)_8NHMe [My Copy] J. Chem. Phys., Vol. 114 (April 2001), pp. 6443-6454. by P. N. Mortenson, D. J. Wales posted to dialanine hexapeptide by Diego_Prada on 2008-08-01 19:23:19 as
	Some further applications of discrete path sampling to cluster isomerization [My Copy] Molecular Physics, pp. 891-908. by David J. Wales posted to free-energy stochastic_processes by Diego_Prada on 2008-05-07 15:34:07 as
	Discrete path sampling [My Copy] Molecular Physics, pp. 3285-3305. by D. J. Wales posted to free-energy stochastic_processes by Diego_Prada on 2008-05-07 15:32:10 as
	Free energy landscapes of model peptides and proteins [My Copy] The Journal of Chemical Physics, Vol. 118, No. 8. (2003), pp. 3891-3897. by David A. Evans, David J. Wales posted to coarse-grained free-energy proteins by Diego_Prada on 2008-04-11 20:05:03 as
	Graph transformation method for calculating waiting times in Markov chains [My Copy] The Journal of Chemical Physics, Vol. 124, No. 23. (2006) by Semen A. Trygubenko, David J. Wales posted to chapt_cmn free-energy markov plos by Diego_Prada on 2008-04-11 19:40:07 as along with 1 person apaydin
	Energy landscapes and properties of biomolecules [My Copy] Physical Biology, Vol. 2, No. 4. (December 2005), S86. by David J. Wales posted to free-energy hot by Diego_Prada on 2008-02-19 11:10:33 as along with 1 person mtw
	Energy landscapes: calculating pathways and rates [My Copy] International Reviews in Physical Chemistry, Vol. 25, No. 1-2. (2006), pp. 237-282. by David J. Wales posted to chapt_cmn free-energy kramers plos by Diego_Prada on 2008-02-17 13:20:49 as
	Equilibrium thermodynamics from basin-sampling [My Copy] The Journal of Chemical Physics, Vol. 124, No. 4. (2006) by Tetyana V. Bogdan, David J. Wales, Florent Calvo posted to free-energy by Diego_Prada on 2008-02-17 13:18:39 as
	Potential Energy and Free Energy Landscapes [My Copy] The Journal of Physical Chemistry B, Vol. 110, No. 42. (1 October 2006), pp. 20765-20776. by David J. Wales, Tetyana V. Bogdan posted to kramers free-energy by Diego_Prada on 2008-02-17 13:17:27 as along with 2 people flbarroso jlh64

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free-energy	101
chapt_cmn	71
networks	66
short-peptides	63
hexapeptide	48
plos	47
md	41
communities	38
markov	35
protein_folding	35
stochastic_processes	34
cmn	33
gnm	32
protein_dynamics	31
pca	30
amino	28
amyloids	27
dialanine	27
md_history	27
methods	27
transition_path	26
articulo	21
complex_systems	21
coarse-grained	18
beta-hairpin	16
hp_model	16
dpca	15
proteins	15
force-fields	13
reaction_paths	13
water	13
chapt_amino	12
statistical_mechanics	12
transition_states	12
clustering	8
experimental	8
first_passage	8
markov_state_models	7
problems_fel_dof	7
active_site	6
glass_transition	6
mutual-information	6
rmsd	6
sampling	6
secondary_structure	6
struct_decorr	6
collective_motions	5
glycine	5
hot	5
kramers	5
langevin	5
mios	5
out_of_equilibrium	5
review	5
allostery	4
entropy	4
kinetic_models	4
mc	4
percolation	4
qha	4
alanine	3
dihedral	3
energy_landscape	3
rol_nodes	3
work_theorem	3
ala5	2
bayesian_analysis	2
conformational_entropy	2
fca	2
funnels	2
go	2
information	2
irreversibility	2
lanvegin	2
leas_action	2
non_markovian	2
probability_distributions	2
statistics	2
wavelets	2
aggregation	1
chain_interactions	1
discrete_breathers	1
enkaphalin	1
fibril_formation	1
flagellum	1
fre	1
hurst_exponent	1
information_theory	1
latex	1
mpi	1
nmr	1
nonequilibrium	1
opls	1
pendiente	1
protein_flexibility	1
relaxation_processes	1
short_time_simus	1
statistical_models	1
t_dependence	1
temperature_dependence	1

Diego_Prada's Wales:DJ [18 articles] Export

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