Diego_Prada's beta-hairpin [16 articles] Export

Recent papers added to Diego_Prada's library classified by the tag beta-hairpin. You can also see everyone's beta-hairpin.

Hide details

	Exploring energy landscapes of protein folding and aggregation. [My Copy] Frontiers in bioscience : a journal and virtual library, Vol. 13 (2008), pp. 4495-4516. by Normand Mousseau, Philippe Derreumaux posted to free-energy fre fibril_formation beta-hairpin aggregation by Diego_Prada on 2009-11-15 19:29:45 as
	Clustering Molecular Dynamics Trajectories: 1. Characterizing the Performance of Different Clustering Algorithms [My Copy] Journal of Chemical Theory and Computation, Vol. 3, No. 6. (1 November 2007), pp. 2312-2334. by Jianyin Shao, Stephen W. Tanner, Nephi Thompson, Thomas E. Cheatham posted to protein_dynamics md communities clustering beta-hairpin by Diego_Prada on 2009-09-19 15:52:15 as along with 10 people and 3 groups karinaecomp anuragsethi scampos oteri barry daevans sobolevnrm LamBras allmensch GermanErlenkamp Structural Biology Group TorVergata structural_bioinformatics baker-group
	Refined kinetic transition networks for the GB1 hairpin peptide [My Copy] Phys. Chem. Chem. Phys., Vol. 11, No. 18. (2009), pp. 3341-3354. by Joanne M. Carr, David J. Wales posted to beta-hairpin first_passage free-energy hexapeptide protein_dynamics protein_folding qha reaction_paths short-peptides transition_path transition_states by Diego_Prada on 2009-07-02 11:55:15 as
	A Probabilistic Model of RNA Conformational Space [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (19 June 2009), e1000406. by Jes Frellsen, Ida Moltke, Martin Thiim, Kanti V. Mardia, Jesper Ferkinghoff-Borg, Thomas Hamelryck posted to beta-hairpin cmn dihedral free-energy hexapeptide short-peptides by Diego_Prada on 2009-06-19 10:09:14 as along with 4 people and 1 group physics phoenixzxl kshameer ppgardne Journal picks
	Multiple probes are required to explore and control the rugged energy landscape of RNA hairpins. [My Copy] Journal of the American Chemical Society, Vol. 130, No. 5. (6 February 2008), pp. 1538-1539. by C. Hyeon, D. Thirumalai posted to beta-hairpin free-energy pca protein_folding by Diego_Prada on 2009-06-15 16:05:55 as
	Folding Pathways and Rates for the Three-Stranded β-Sheet Peptide Beta3s using Discrete Path Sampling [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 29. (1 July 2008), pp. 8760-8769. by Joanne M. Carr, David J. Wales posted to beta-hairpin free-energy hexapeptide protein_folding short-peptides by Diego_Prada on 2009-04-30 12:10:50 as
	Describing Protein Folding Kinetics by Molecular Dynamics Simulations. 2. Example Applications to Alanine Dipeptide and a β-Hairpin Peptide [My Copy] J. Phys. Chem. B, Vol. 108, No. 21. (27 May 2004), pp. 6582-6594. by W. C. Swope, J. W. Pitera, F. Suits, et al.M. Pitman, M. Eleftheriou, B. G. Fitch, R. S. Germain, A. Rayshubski, T. J. C. Ward, Y. Zhestkov, R. Zhou posted to beta-hairpin hexapeptide markov md stochastic_processes by Diego_Prada on 2009-02-16 11:17:38 as along with 1 person toerst
	Alpha-helix and beta-hairpin Folding from experiment, analytical theory and molecular dynamics simulations. [My Copy] Current protein & peptide science, Vol. 3, No. 2. (April 2002), pp. 191-200. by O. V. Galzitskaya, J. Higo, A. V. Finkelstein posted to beta-hairpin short-peptides by Diego_Prada on 2008-12-19 16:10:00 as
	Force field influences in beta-hairpin folding simulations [My Copy] Protein Sci, Vol. 15, No. 11. (1 November 2006), pp. 2642-2655. by Thu Z. Lwin, Ray Luo posted to beta-hairpin force-fields by Diego_Prada on 2008-12-16 12:07:51 as
	beta-Hairpin folding and stability: molecular dynamics simulations of designed peptides in aqueous solution [My Copy] Journal of Peptide Science, Vol. 10, No. 9. (2004), pp. 546-565. by Clara M. Santiveri, Ángeles M. Jiménez, Manuel Rico, Wilfred F. van Gunsteren, Xavier Daura posted to beta-hairpin short-peptides by Diego_Prada on 2008-12-15 13:02:27 as
	Characterization of the Stereochemical Selectivity of β-Hairpin Formation by Molecular Dynamics Simulations [My Copy] The Journal of Physical Chemistry B, Vol. 109, No. 3. (1 January 2005), pp. 1281-1288. by Patricia Soto, Ronen Zangi posted to beta-hairpin experimental short-peptides by Diego_Prada on 2008-12-15 12:30:06 as
	Peptide Folding: When Simulation Meets Experiment [My Copy] Angewandte Chemie International Edition, Vol. 38, No. 1-2. (1999), pp. 236-240. by Xavier Daura, Karl Gademann, Bernhard Jaun, Dieter Seebach, Wilfred F. van Gunsteren, Alan E. Mark posted to beta-hairpin md protein_dynamics short-peptides by Diego_Prada on 2008-12-15 12:06:57 as along with 2 people dsmueller jteyra
	Folding dynamics and mechanism of \|[beta]\|-hairpin formation [My Copy] Nature, Vol. 390, No. 6656. (13 November 1997), pp. 196-199. by Victor Munoz, Peggy A. Thompson, James Hofrichter, William A. Eaton posted to beta-hairpin short-peptides by Diego_Prada on 2008-12-11 16:32:00 as along with 1 person dgront
	Understanding the key factors that control the rate of Î²-hairpin folding [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 45. (9 November 2004), pp. 15915-15920. by Deguo Du, Yongjin Zhu, Cheng-Yen Huang, Feng Gai posted to beta-hairpin short-peptides by Diego_Prada on 2008-12-11 16:10:28 as along with 2 people kjell allmensch
	A statistical mechanical model for Î²-hairpin kinetics [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 11. (26 May 1998), pp. 5872-5879. by Victor MuÃ±oz, Eric R. Henry, James Hofrichter, William A. Eaton posted to beta-hairpin by Diego_Prada on 2008-12-10 15:51:37 as
	Kinetic pathways of beta-hairpin (un)folding in explicit solvent. [My Copy] Biophys J, Vol. 88, No. 1. (January 2005), pp. 50-61. by P. G. Bolhuis posted to beta-hairpin by Diego_Prada on 2008-12-10 15:49:21 as along with 2 people paddydu ruvido

Note: You may cite this page as: http://www.citeulike.org/user/Diego_Prada/tag/beta-hairpin

free-energy	94
networks	66
chapt_cmn	63
short-peptides	63
hexapeptide	48
plos	47
md	41
communities	38
markov	35
stochastic_processes	34
gnm	32
cmn	31
pca	30
protein_dynamics	29
amino	28
protein_folding	28
amyloids	27
dialanine	27
md_history	26
articulo	21
complex_systems	21
transition_path	19
coarse-grained	18
methods	18
beta-hairpin	16
hp_model	16
dpca	15
proteins	15
force-fields	13
water	13
chapt_amino	12
statistical_mechanics	12
reaction_paths	10
transition_states	10
clustering	8
experimental	8
first_passage	8
markov_state_models	7
problems_fel_dof	7
active_site	6
glass_transition	6
mutual-information	6
rmsd	6
secondary_structure	6
struct_decorr	6
collective_motions	5
glycine	5
hot	5
kramers	5
langevin	5
mios	5
out_of_equilibrium	5
sampling	5
allostery	4
entropy	4
kinetic_models	4
mc	4
percolation	4
qha	4
alanine	3
dihedral	3
energy_landscape	3
rol_nodes	3
work_theorem	3
ala5	2
bayesian_analysis	2
conformational_entropy	2
fca	2
funnels	2
go	2
information	2
irreversibility	2
lanvegin	2
leas_action	2
non_markovian	2
probability_distributions	2
statistics	2
wavelets	2
aggregation	1
chain_interactions	1
discrete_breathers	1
enkaphalin	1
fibril_formation	1
flagellum	1
fre	1
hurst_exponent	1
information_theory	1
latex	1
mpi	1
nmr	1
nonequilibrium	1
opls	1
pendiente	1
protein_flexibility	1
relaxation_processes	1
review	1
statistical_models	1
t_dependence	1
temperature_dependence	1

Diego_Prada's beta-hairpin [16 articles] Export

Diego_Prada's tags