Diego_Prada's chapt_amino [12 articles] Export

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	Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms1 [My Copy] Journal of Molecular Biology, Vol. 285, No. 4. (29 January 1999), pp. 1711-1733. by Word, Simon C. Lovell, Thomas H. Labean, et al.Hope C. Taylor, Michael E. Zalis, Brent K. Presley, Jane S. Richardson, David C. Richardson posted to chapt_amino amino by Diego_Prada on 2009-08-12 12:21:51 as along with 4 people and 5 groups aqeel dgront barry joergkurtwegner structural_bioinformatics Bioinformatics Molecular-Modelling Drug-Design Cheminformatics
	A survey of left-handed polyproline II helices [My Copy] Protein Science, Vol. 8, No. 3. (1999), pp. 587-595. by Benjamin J. Stapley, Trevor P. Creamer posted to chapt_amino amino by Diego_Prada on 2009-08-07 20:58:59 as
	Conformation of Polypeptides and Proteins [My Copy] In Advances in Protein Chemistry Volume 23, Vol. 23 (1968), pp. 283-437. by G. N. Ramachandran, V. Sasisekharan posted to chapt_amino amino by Diego_Prada on 2009-08-07 12:47:38 as
	Stereochemical quality of protein structure coordinates [My Copy] Proteins: Structure, Function, and Genetics, Vol. 12, No. 4. (3 February 1992), pp. 345-364. by Anne L. Morris, Malcolm W. Macarthur, E. Gail Hutchinson, Janet M. Thornton posted to chapt_amino amino by Diego_Prada on 2009-08-07 12:32:21 as along with 2 people aqeel andreasauerwein
	The Protein Data Bank [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 235-242. by Helen M. Berman, John Westbrook, Zukang Feng, et al.Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne posted to chapt_amino amino proteins by Diego_Prada on 2009-08-06 21:38:47 as along with 45 people and 5 groups trishul krapnik barmak7282 viktor21614 badi ucbcjbm TLVincent maria_hauser Martin8223 tomjad flbarroso Taguan oceanwind dsmueller fisherp semin MarcoAlvarez kumar_physics LamBras RamuAnandakrishnan nlapalu reyez nigham lillekatt thaliana dimka kuhn jwm vavi bicko itmeson dgront caporaso condon aengisch debatebob massivemayhem gisle girschick selrac tji higueruelo boris_aguilar sebk timg References for 3DSim paper Radiation_Damage Stressosome biomedical-nlp beta
	Coulombic interactions between partially charged main-chain atoms not hydrogen-bonded to each other influence the conformations of α-helices and antiparallel β-sheet. A new method for analysing the forces between hydrogen bonding groups in proteins includes all the Coulombic interactions [My Copy] Journal of Molecular Biology, Vol. 248, No. 2. (1995), pp. 361-373. by P. Maccallum, R. Poet, E. Jamesmilnerwhite posted to chapt_amino amino by Diego_Prada on 2009-07-20 17:35:08 as
	The anatomy and taxonomy of protein structure. [My Copy] Advances in protein chemistry, Vol. 34 (1981), pp. 167-339. by J. S. Richardson posted to chapt_amino amino protein_folding proteins by Diego_Prada on 2009-07-18 18:21:51 as along with 1 person nikkiwithers
	Revisiting the Ramachandran plot: hard-sphere repulsion, electrostatics, and H-bonding in the alpha-helix. [My Copy] Protein Sci, Vol. 12, No. 11. (November 2003), pp. 2508-2522. by B. K. Ho, A. Thomas, R. Brasseur posted to chapt_amino amino by Diego_Prada on 2009-07-18 18:06:17 as along with 3 people and 1 group aqeel allmensch Einat structural_bioinformatics
	Phi/Psi-chology: Ramachandran revisited [My Copy] Structure, Vol. 4, No. 12. (15 December 1996), pp. 1395-1400. by G. Kleywegt, T. Jones posted to chapt_amino amino glycine by Diego_Prada on 2009-07-08 22:34:43 as
	Structure validation by Cα geometry: Φ,Ψ and Cβ deviation [My Copy] Proteins: Structure, Function, and Genetics, Vol. 50, No. 3. (15 February 2003), pp. 437-450. by Simon C. Lovell, Ian W. Davis, W. Bryan Arendall, et al.Paul I. W. de Bakker, J. Michael Word, Michael G. Prisant, Jane S. Richardson, David C. Richardson posted to chapt_amino amino glycine by Diego_Prada on 2009-07-08 22:26:32 as along with 9 people and 2 groups bmduggan aqeel jwm robert dgront xiaobeizhao martainn mijam pavanghatty Radiation_Damage Stressosome
	Conformations of amino acids in proteins [My Copy] Acta Crystallographica Section D, Vol. 58, No. 5. (May 2002), pp. 768-776. by Sven Hovmöller, Tuping Zhou, Tomas Ohlson posted to chapt_amino amino by Diego_Prada on 2009-07-08 20:20:50 as along with 1 person middledomain
	Stereochemistry of polypeptide chain configurations. [My Copy] Journal of molecular biology, Vol. 7 (July 1963), pp. 95-99. by G. N. Ramachandran, C. Ramakrishnan, V. Sasisekharan posted to chapt_amino amino dialanine proteins by Diego_Prada on 2008-08-01 20:33:15 as along with 7 people stharward kumar_physics yangjustinc reyez cen4ik jwm wouterboomsma

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free-energy	101
chapt_cmn	71
networks	66
short-peptides	63
hexapeptide	48
plos	47
md	41
communities	38
protein_folding	36
markov	35
stochastic_processes	34
cmn	33
gnm	32
protein_dynamics	31
pca	30
amino	28
amyloids	27
dialanine	27
md_history	27
methods	27
transition_path	26
articulo	21
complex_systems	21
coarse-grained	18
beta-hairpin	16
hp_model	16
dpca	15
proteins	15
force-fields	13
reaction_paths	13
water	13
chapt_amino	12
statistical_mechanics	12
transition_states	12
clustering	8
experimental	8
first_passage	8
markov_state_models	7
problems_fel_dof	7
active_site	6
glass_transition	6
mutual-information	6
rmsd	6
sampling	6
secondary_structure	6
struct_decorr	6
collective_motions	5
glycine	5
hot	5
kramers	5
langevin	5
mios	5
out_of_equilibrium	5
review	5
allostery	4
entropy	4
kinetic_models	4
mc	4
percolation	4
qha	4
alanine	3
dihedral	3
energy_landscape	3
rol_nodes	3
work_theorem	3
ala5	2
bayesian_analysis	2
conformational_entropy	2
fca	2
funnels	2
go	2
information	2
irreversibility	2
lanvegin	2
leas_action	2
non_markovian	2
probability_distributions	2
statistics	2
wavelets	2
aggregation	1
chain_interactions	1
discrete_breathers	1
enkaphalin	1
fibril_formation	1
flagellum	1
fre	1
hurst_exponent	1
information_theory	1
latex	1
mpi	1
nmr	1
nonequilibrium	1
opls	1
pendiente	1
protein_flexibility	1
relaxation_processes	1
short_time_simus	1
statistical_models	1
t_dependence	1
temperature_dependence	1

Diego_Prada's chapt_amino [12 articles] Export

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