Diego_Prada's communities [38 articles] Export

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	Graph clustering by flow simulation [My Copy] (2000) by S. van Dongen posted to networks communities chapt_cmn by Diego_Prada on 2009-11-02 20:32:11 as
	Clustering Molecular Dynamics Trajectories: 1. Characterizing the Performance of Different Clustering Algorithms [My Copy] Journal of Chemical Theory and Computation, Vol. 3, No. 6. (1 November 2007), pp. 2312-2334. by Jianyin Shao, Stephen W. Tanner, Nephi Thompson, Thomas E. Cheatham posted to protein_dynamics md communities clustering beta-hairpin by Diego_Prada on 2009-09-19 15:52:15 as along with 9 people and 3 groups anuragsethi scampos oteri barry daevans sobolevnrm LamBras allmensch GermanErlenkamp Structural Biology Group TorVergata structural_bioinformatics baker-group
	Assessing the relevance of node features for network structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 28. (14 July 2009), pp. 11433-11438. by Ginestra Bianconi, Paolo Pin, Matteo Marsili posted to communities networks by Diego_Prada on 2009-07-17 16:51:26 as along with 12 people rdiaz daforerog Kovanen zwang apocapoc winterstream trfield deanmalmgren tomt21 roys tmmurali statnet
	Community detection in graphs [My Copy] (3 Jun 2009) by Santo Fortunato posted to communities networks by Diego_Prada on 2009-06-08 10:52:07 as along with 14 people ecome AaronMcDaid saket pdlug dpf Bolozna lawraga Kovanen marinari juhop janpaniev acrmartins aheilbut deanmalmgren
	Cartography of complex networks: modules and universal roles. [My Copy] Journal of statistical mechanics (Online), Vol. 2005, No. P02001. (1 February 2005), P02001. by Roger Guimerà, Luís Nunes A. Amaral posted to communities networks rol_nodes by Diego_Prada on 2008-08-28 11:46:35 as along with 3 people hrotsos senseable-urb diamantis
	Finding communities in linear time: a physics approach [My Copy] The European Physical Journal B - Condensed Matter and Complex Systems, Vol. 38, No. 2. (25 March 2004), pp. 331-338. by F. Wu, B. A. Huberman posted to chapt_cmn communities networks by Diego_Prada on 2008-08-16 12:57:54 as along with 1 person birukou
	Fast algorithm for detecting community structure in networks [My Copy] Physical Review E, Vol. 69, No. 6. (Jun 2004), 066133. by M. E. J. Newman posted to chapt_cmn communities networks by Diego_Prada on 2008-08-16 12:23:31 as along with 6 people Shirakawa muraken cgaugain tnhh RobMills pdlug
	Defining and identifying communities in networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 9. (2 March 2004), pp. 2658-2663. by Filippo Radicchi, Claudio Castellano, Federico Cecconi, Vittorio Loreto, Domenico Parisi posted to chapt_cmn communities networks by Diego_Prada on 2008-08-15 19:06:40 as along with 19 people and 2 groups akavipat mussi almadana christiand vtraag kremso kubyaddi fabianavernero haewoon castellano shivaram jfr yas merazzle gcalda ltabourier sparikh carlk tnhh smc-infm T_lab
	Detecting network communities: a new systematic and efficient algorithm [My Copy] Journal of Statistical Mechanics: Theory and Experiment, Vol. 2004, No. 10. (2004) by Luca Donetti, Miguel posted to chapt_cmn communities networks by Diego_Prada on 2008-08-15 19:01:49 as
	Comparing community structure identification [My Copy] Journal of Statistical Mechanics: Theory and Experiment, Vol. 2005, No. 09. (September 2005), P09008. by Leon Danon, Albert Díaz-Guilera, Jordi Duch, Alex Arenas posted to chapt_cmn communities networks plos by Diego_Prada on 2008-08-15 17:59:14 as along with 7 people compbio krisl almadana Kovanen cgaugain conradlee dpf
	Computing communities in large networks using random walks [My Copy] (14 Dec 2004) by Matthieu Latapy, Pascal Pons posted to communities networks by Diego_Prada on 2008-02-29 17:20:33 as
	Network Brownian Motion: A New Method to Measure Vertex-Vertex Proximity and to Identify Communities and Subcommunities [My Copy] Computational Science - ICCS 2004 (2004), pp. 1062-1069. by Haijun Zhou, Reinhard Lipowsky posted to communities networks by Diego_Prada on 2008-02-29 17:18:31 as
	Distance, dissimilarity index, and network community structure [My Copy] Physical Review E, Vol. 67, No. 6. (10 June 2003), 061901. by Haijun Zhou posted to communities networks by Diego_Prada on 2008-02-29 17:15:49 as
	Network landscape from a Brownian particle's perspective [My Copy] Physical Review E, Vol. 67, No. 4. (21 April 2003), 041908. by Haijun Zhou posted to communities networks by Diego_Prada on 2008-02-29 17:14:06 as
	Detecting Fuzzy Community Structures in Complex Networks with a Potts Model [My Copy] Physical Review Letters, Vol. 93, No. 21. (2004) by Jörg Reichardt, Stefan Bornholdt posted to communities networks by Diego_Prada on 2008-02-24 19:09:36 as along with 7 people and 2 groups nolodie kubyaddi zufar phreeza fukken hannu marcio Network Analysis of Genes Regulated in Renal Diseases ThinkTank
	Modularity and community structure in networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 23. (6 June 2006), pp. 8577-8582. by M. E. J. Newman posted to communities networks by Diego_Prada on 2008-02-21 13:14:38 as along with 32 people and 4 groups houniao007 gagliol spool jago thegoose tnhh daforerog pdlug senseable-urb tomhebbron dakelley rsantana orahcio vtraag dartar aqeel ChaTo jfr yas balicea ddahlem cmm fukken kubyaddi adriandefroment gcalda hannu marcio phreeza carlk ellakat jjray complex networks T_lab FAB-lab ThinkTank
	Finding and evaluating community structure in networks [My Copy] Physical Review E, Vol. 69, No. 2. (Feb 2004), 026113. by M. E. J. Newman, M. Girvan posted to chapt_cmn communities networks by Diego_Prada on 2008-02-21 13:11:36 as along with 18 people and 1 group almadana lawraga senseable-urb diamantis rsantana panisson vtraag jyew muraken cgaugain davidecellai lshaw gcalda RobMills hannu carlk ilkert ddahlem ThinkTank
	Community structure in social and biological networks [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 12. (11 June 2002), pp. 7821-7826. by M. Girvan, M. E. J. Newman posted to chapt_cmn communities networks by Diego_Prada on 2008-02-21 13:08:23 as along with 44 people and 4 groups spool lawraga studentx ChaTo kubyaddi anhlc Adso orahcio dartar mattjb muraken cgaugain diamantis nolodie davidecellai qwermish pridkett korakot mrm rasca jtowle PiersYoung zqshen schaal shivaram yas lyongu herdivineshadow jirlong fwkroon adriandefroment gcalda noby andreacapocci Evangelia marcio pipkin stefanoallesina verdicchio compbio ellakat ganden chibatching jpbarrette Philosophy_of_Information Blog_and_Wiki_Research GraphVis T_lab
	Functional cartography of complex metabolic networks [My Copy] Nature, Vol. 433, No. 7028. (24 February 2005), pp. 895-900. by Roger Guimera, Luis A. Nunes Amaral posted to communities networks rol_nodes by Diego_Prada on 2008-02-17 13:12:26 as along with 23 people and 4 groups schwartzjmc tomt21 lawraga Scis0000002 vtraag cgaugain pdelosri cswinburne camster dbk BioGeek Borelli lfriedl balajis alexg eweaver tny wnpx cjeans kdang carlk RobMills marcio streptomyces dbk-lab kdl Bioinformatics
	Finding Community Structure in Mega-scale Social Networks [My Copy] (8 Feb 2007) by Ken Wakita, Toshiyuki Tsurumi posted to chapt_cmn communities networks by Diego_Prada on 2008-02-17 13:10:25 as
	Construction of effective free energy landscape from single-molecule time series [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 49. (4 December 2007), pp. 19297-19302. by Akinori Baba, Tamiki Komatsuzaki posted to communities networks free-energy cmn by Diego_Prada on 2008-02-17 12:51:10 as along with 6 people and 1 group hmk zwang cactus sobolevnrm arnaudriegert hsekiguc baker-group
	Topographical complexity of multidimensional energy landscapes [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 49. (5 December 2006), pp. 18551-18555. by Gareth J. Rylance, Roy L. Johnston, Yasuhiro Matsunaga, Chun-Biu Li, Akinori Baba, Tamiki Komatsuzaki posted to communities networks free-energy cmn by Diego_Prada on 2008-02-17 12:50:10 as
	Emergence of Communities in Weighted Networks [My Copy] Physical Review Letters, Vol. 99, No. 22. (2007) by Jussi M. Kumpula, Jukka P. Onnela, Jari Saramäki, Kimmo Kaski, János Kertész posted to communities networks by Diego_Prada on 2008-02-17 12:48:29 as along with 3 people Kovanen travieso sbianco
	Percolation and cluster structure parameters: The enhanced Hoshen-Kopelman algorithm [My Copy] Physical Review E, Vol. 56, No. 2. (1997), 1455. by J. Hoshen, M. W. Berry, K. S. Minser posted to communities methods networks percolation by Diego_Prada on 2008-02-17 12:34:58 as
	Performance criteria for graph clustering and Markov cluster experiments [My Copy] (2000) by S. van Dongen posted to communities networks by Diego_Prada on 2008-02-17 12:33:37 as
	A Stochastic Uncoupling Process for Graphs [My Copy] by S. van Dongen posted to communities networks by Diego_Prada on 2008-02-17 12:31:35 as
	A Cluster Algorithm for Graphs [My Copy] by S. van Dongen posted to communities networks by Diego_Prada on 2008-02-17 12:29:44 as along with 2 people hehrig cerca
	Structural Inference of Hierarchies in Networks [My Copy] (9 Oct 2006) by Aaron Clauset, Cristopher Moore, M. E. J. Newman posted to communities networks by Diego_Prada on 2008-02-17 12:25:55 as along with 7 people and 1 group jaspervoskuilen skyebend scis0000001 krisl merazzle hannu roys ThinkTank
	Finding community structure in very large networks [My Copy] Physical Review E, Vol. 70, No. 6. (6 Dec 2004), 066111. by Aaron Clauset, M. E. J. Newman, Cristopher Moore posted to communities hot networks by Diego_Prada on 2008-02-17 12:23:46 as along with 5 people studentx mattjb nolodie muraken cgaugain
	Finding instabilities in the community structure of complex networks [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 72, No. 5. (2005) by David Gfeller, Jean C. Chappelier, Paolo posted to communities networks by Diego_Prada on 2008-02-17 12:21:42 as along with 2 people ruvido jmarcelino
	Spectral Coarse Graining of Complex Networks [My Copy] Physical Review Letters, Vol. 99, No. 3. (2007) by David Gfeller, Paolo posted to communities networks by Diego_Prada on 2008-02-17 12:14:42 as along with 1 person elm
	From the Cover: Complex network analysis of free-energy landscapes [My Copy] PNAS, Vol. 104, No. 6. (6 February 2007), pp. 1817-1822. by D. Gfeller, De Los, A. Caflisch, F. Rao posted to chapt_cmn cmn communities free-energy networks plos by Diego_Prada on 2008-02-17 12:12:33 as along with 4 people noby jlh64 marcio nh
	Maps of random walks on complex networks reveal community structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 4. (29 January 2008), pp. 1118-1123. by Martin Rosvall, Carl T. Bergstrom posted to communities networks by Diego_Prada on 2008-02-17 12:10:48 as along with 22 people Borelli davidecellai jsaramak normaali daforerog apocapoc Kovanen vtraag cgaugain yzhang haewoon lynnefox misc jonesn lfriedl stringertheory cjeans cactus hannu roys maralena lmichan
	Size reduction of complex networks preserving modularity [My Copy] ArXiv Physics e-prints (February 2007) by A. Arenas, J. Duch, A. Fernandez, S. Gomez posted to communities networks by Diego_Prada on 2008-02-17 12:01:32 as along with 4 people kubyaddi sato-ryu ltabourier mylit
	Community structure in directed networks [My Copy] (27 Sep 2007) by E. A. Leicht, M. E. J. Newman posted to chapt_cmn communities networks by Diego_Prada on 2008-02-17 11:57:57 as along with 6 people trunov yizhi aanthon2 lfriedl marcio kubyaddi
	Module identification in bipartite networks with applications to directed networks [My Copy] (12 Jan 2007) by R. Guimera, M. Sales-Pardo, L. A. N. Amaral posted to communities networks by Diego_Prada on 2008-02-17 11:57:23 as along with 3 people krisl fukken kubyaddi
	Analysis of weighted networks [My Copy] Physical Review E, Vol. 70, No. 5. (24 Nov 2004), 056131. by M. E. J. Newman posted to chapt_cmn communities networks by Diego_Prada on 2008-02-17 11:54:55 as along with 6 people ganden anuragsethi senseable-urb davidecellai lshaw Borelli
	Finding community structure in networks using the eigenvectors of matrices [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 74, No. 3. (2006), 036104. by M. E. J. Newman posted to communities networks by Diego_Prada on 2008-02-17 11:12:27 as along with 9 people and 1 group tomhebbron AaronMcDaid lawraga studentx vtraag muraken cgaugain bigbossman hannu ThinkTank

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free-energy	87
networks	66
short-peptides	62
chapt_cmn	61
hexapeptide	48
plos	47
md	41
communities	38
markov	35
stochastic_processes	34
cmn	29
pca	29
protein_dynamics	29
protein_folding	27
amino	26
amyloids	26
md_history	26
dialanine	25
gnm	25
articulo	21
complex_systems	21
coarse-grained	18
hp_model	16
beta-hairpin	15
dpca	15
proteins	15
methods	14
transition_path	13
water	13
chapt_amino	12
force-fields	12
statistical_mechanics	12
clustering	8
experimental	8
first_passage	8
reaction_paths	7
transition_states	7
active_site	6
glass_transition	6
mutual-information	6
struct_decorr	6
glycine	5
hot	5
kramers	5
langevin	5
mios	5
out_of_equilibrium	5
rmsd	5
secondary_structure	5
allostery	4
entropy	4
kinetic_models	4
mc	4
percolation	4
qha	4
collective_motions	3
dihedral	3
energy_landscape	3
rol_nodes	3
work_theorem	3
ala5	2
alanine	2
bayesian_analysis	2
fca	2
funnels	2
go	2
information	2
irreversibility	2
lanvegin	2
leas_action	2
non_markovian	2
statistics	2
wavelets	2
chain_interactions	1
conformational_entropy	1
discrete_breathers	1
enkaphalin	1
flagellum	1
hurst_exponent	1
information_theory	1
latex	1
markov_state_models	1
mpi	1
nmr	1
nonequilibrium	1
opls	1
pendiente	1
protein_flexibility	1
relaxation_processes	1
review	1
statistical_models	1
t_dependence	1

Diego_Prada's communities [38 articles] Export

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