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Evangelia's peptides [110 articles]

Recent papers added to Evangelia's library classified by the tag peptides. You can also see everyone's peptides.
  • An unconventional IAP-binding motif revealed by target-assisted iterative screening (TAIS) of the BIR3-cIAP1 domain.
    Journal of molecular recognition : JMR, Vol. 20, No. 1. (b 2007), pp. 39-50.
    by A Kurakin, DE Bredesen
    posted to peptides example by Evangelia on 2008-07-01 15:28:45 as **
  • The mechanism of peptide-binding specificity of IAP BIR domains
    Cell Death and Differentiation, Vol. aop, No. current.
    by BP Eckelman, M Drag, SJ Snipas, GS Salvesen
    posted to peptides example by Evangelia on 2008-07-01 15:24:17 as **
  • Decoding of Methylated Histone H3 Tail by the Pygo-BCL9 Wnt Signaling Complex
    Molecular Cell, Vol. 30, No. 4. (23 May 2008), pp. 507-518.
    by Marc Fiedler, María J Sánchez-Barrena, Maxim Nekrasov, Juliusz Mieszczanek, Vladimir Rybin, Jürg Müller, Phil Evans, Mariann Bienz
    posted to peptides example by Evangelia on 2008-06-18 12:23:29 as read
  • Mechanism of activation of the Formin protein Daam1
    Proceedings of the National Academy of Sciences, Vol. 105, No. 1. (8 January 2008), pp. 210-215.
    by Wei Liu, Akira Sato, Deepak Khadka, Ritu Bharti, Hector Diaz, Loren W Runnels, Raymond Habas
    posted to peptides example by Evangelia on 2008-05-30 14:41:21 as **
  • ERK promotes tumorigenesis by inhibiting FOXO3a via MDM2-mediated degradation.
    Nat Cell Biol (20 January 2008)
    by Jer-Yen Y Yang, Cong S S Zong, Weiya Xia, Hirohito Yamaguchi, Qingqing Ding, Xiaoming Xie, Jing-Yu Y Lang, Chien-Chen C Lai, Chun-Ju J Chang, Wei-Chien C Huang, Hsin Huang, Hsu-Ping P Kuo, Dung-Fang F Lee, Long-Yuan Y Li, Huang-Chun C Lien, Xiaoyun Cheng, King-Jen J Chang, Chwan-Deng D Hsiao, Fuu-Jen J Tsai, Chang-Hai H Tsai, Aysegul A A Sahin, William J J Muller, Gordon B B Mills, Dihua Yu, Gabriel N N Hortobagyi, Mien-Chie C Hung
    posted to peptides example by Evangelia on 2008-05-30 14:39:46 as ** along with 2 people jyuh jackjackjjj
  • The 7-amino-acid site in the proline-rich region of the N-terminal domain of p53 is involved in the interaction with FAK and is critical for p53 functioning
    Biochem. J., Vol. 411, No. 1. (1 April 2008), pp. 151-60.
    by VM Golubovskaya, R Finch, M Zheng, EV Kurenova, Cance
    posted to proline peptides example by Evangelia on 2008-05-30 14:38:03 as **
  • HIV-1 Nef disrupts the podocyte actin cytoskeleton by interacting with diaphanous interacting protein (DIP)
    J. Biol. Chem. (30 January 2008), M708920200.
    by Ting-Chi Lu, John C He, Zhaohui Wang, Xiaobei Feng, Tomoko Fukumi-Tominaga, Nan Chen, Jin Xu, Ravi Iyengar, Paul E Klotman
    posted to peptides hiv example by Evangelia on 2008-05-30 14:35:23 as **
  • Sirt2 interacts with 14-3-3 beta/gamma and down-regulates the activity of p53.
    Biochem Biophys Res Commun (1 February 2008)
    by Yun-Hye H Jin, Yeon-Jin J Kim, Dae-Won W Kim, Kwang-Hyun H Baek, Bok Yun Y Kang, Chang-Yeol Y Yeo, Kwang-Youl Y Lee
    posted to peptides example by Evangelia on 2008-05-30 14:33:53 as ** along with 1 person jyuh
  • Specificity and versatility of SH3 and other proline-recognition domains: structural basis and implications for cellular signal transduction.
    The Biochemical journal, Vol. 390, No. Pt 3. (15 September 2005), pp. 641-653.
    by SS Li
    posted to specificity sh3 peptides by Evangelia on 2008-05-23 07:47:48 as **
  • The Structure and Function of Proline Recognition Domains
    Sci. STKE, Vol. 2003, No. 179. (22 April 2003), re8.
    by Ali Zarrinpar, Roby P Bhattacharyya, Wendell A Lim
    posted to structure review proline-rich peptides by Evangelia on 2008-05-23 07:28:27 as **
  • The Phosphatase Cdc14 Triggers Mitotic Exit by Reversal of Cdk-Dependent Phosphorylation
    Molecular Cell, Vol. 2, No. 6. (December 1998), pp. 709-718.
    by Rosella Visintin, Karen Craig, Ellen S Hwang, Susanne Prinz, Mike Tyers, Angelika Amon
    posted to peptides interaction example by Evangelia on 2008-05-21 14:29:39 as **
  • Human biliverdin reductase is an ERK activator; hBVR is an ERK nuclear transporter and is required for MAPK signaling
    Proceedings of the National Academy of Sciences, Vol. 105, No. 19. (13 May 2008), pp. 6870-6875.
    by Nicole Lerner-Marmarosh, Tihomir Miralem, Peter E Gibbs, Mahin D Maines
    posted to signaling peptides experimental example by Evangelia on 2008-05-21 14:05:07 as **
  • Dissection of the insulin signaling pathway via quantitative phosphoproteomics
    Proceedings of the National Academy of Sciences, Vol. 105, No. 7. (19 February 2008), pp. 2451-2456.
    by Marcus Kruger, Irina Kratchmarova, Blagoy Blagoev, Yu-Hua Tseng, Ronald C Kahn, Matthias Mann
    posted to peptides pathways example by Evangelia on 2008-05-21 14:02:57 as ** along with 2 people brianb renatomilani
  • Rho-Kinase Phosphorylates PAR-3 and Disrupts PAR Complex Formation
    Developmental Cell, Vol. 14, No. 2. (12 February 2008), pp. 205-215.
    by Masanori Nakayama, Takaaki M Goto, Masayuki Sugimoto, Takashi Nishimura, Takafumi Shinagawa, Sigeo Ohno, Mutsuki Amano, Kozo Kaibuchi
    posted to phospho_peptides peptides experimental example by Evangelia on 2008-05-21 14:00:29 as **
  • The Viral Oncoprotein LMP1 Exploits TRADD for Signaling by Masking Its Apoptotic Activity
    PLoS Biology, Vol. 6, No. 1. (1 January 2008), e8.
    by Frank Schneider, Julia Neugebauer, Janine Griese, Nicola Liefold, Helmut Kutz, Cinthia Briseño, Arnd Kieser
    posted to peptides experimental example by Evangelia on 2008-05-21 13:58:16 as ** along with 1 person biomcgary
  • Small molecule obatoclax (GX15-070) antagonizes MCL-1 and overcomes MCL-1-mediated resistance to apoptosis.
    Proc Natl Acad Sci U S A, Vol. 104, No. 49. (4 December 2007), pp. 19512-19517.
    by M Nguyen, RC Marcellus, A Roulston, M Watson, L Serfass, SR Murthy Madiraju, D Goulet, J Viallet, L Bélec, X Billot, S Acoca, E Purisima, A Wiegmans, L Cluse, RW Johnstone, P Beauparlant, GC Shore
    posted to peptides experimental example by Evangelia on 2008-05-21 13:57:03 as ** along with 2 people higueruelo jyuh
  • Potent D-peptide inhibitors of HIV-1 entry
    Proceedings of the National Academy of Sciences, Vol. 104, No. 43. (23 October 2007), pp. 16828-16833.
    by Brett D Welch, Andrew P Vandemark, Annie Heroux, Christopher P Hill, Michael S Kay
    posted to peptides experimental example by Evangelia on 2008-05-21 13:54:58 as **
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology:, Vol. 3, No. 9. (September 2007), pp. 1783-9.
    by D Betel, KE Breitkreuz, R Isserlin, D Dewar-Darch, M Tyers, CW Hogue
    posted to protein peptides interactions computational by Evangelia on 2008-05-21 13:53:24 as ****
  • Control of Emi2 activity and stability through Mos-mediated recruitment of PP2A
    Proceedings of the National Academy of Sciences, Vol. 104, No. 42. (16 October 2007), pp. 16564-16569.
    by Judy Q Wu, David V Hansen, Yanxiang Guo, Michael Z Wang, Wanli Tang, Christopher D Freel, Jeffrey J Tung, Peter K Jackson, Sally Kornbluth
    posted to peptides experimental example by Evangelia on 2008-05-21 13:25:37 as **
  • Spatial regulation of Raf kinase signaling by RKTG
    Proceedings of the National Academy of Sciences, Vol. 104, No. 36. (4 September 2007), pp. 14348-14353.
    by Lin Feng, Xiaoduo Xie, Qiurong Ding, Xiaolin Luo, Jing He, Fengjuan Fan, Weizhong Liu, Zhenzhen Wang, Yan Chen
    posted to signaling peptides experimental example by Evangelia on 2008-05-21 13:23:21 as **
  • An Essential Role for 14-3-3 Proteins in Brassinosteroid Signal Transduction in Arabidopsis
    Developmental Cell, Vol. 13, No. 2. (7 August 2007), pp. 177-189.
    by Srinivas S Gampala, Tae-Wuk Kim, Jun-Xian He, Wenqiang Tang, Zhiping Deng, Mingyi-Yi Bai, Shenheng Guan, Sylvie Lalonde, Ying Sun, Joshua M Gendron, Huanjing Chen, Nakako Shibagaki, Robert J Ferl, David Ehrhardt, Kang Chong, Alma L Burlingame, Zhi-Yong Wang
    posted to signaling peptides experimental example by Evangelia on 2008-05-21 13:21:43 as **
  • 14-3-3 Proteins in Plant Brassinosteroid Signaling
    Developmental Cell, Vol. 13, No. 2. (7 August 2007), pp. 162-164.
    by Sacco C de Vries
    posted to peptides experimental example by Evangelia on 2008-05-21 13:20:50 as **
  • Design of helical, oligomeric HIV-1 fusion inhibitor peptides with potent activity against enfuvirtide-resistant virus
    Proceedings of the National Academy of Sciences, Vol. 104, No. 31. (31 July 2007), pp. 12772-12777.
    by John J Dwyer, Karen L Wilson, Donna K Davison, Stephanie A Freel, Jennifer E Seedorff, Stephen A Wring, Nicolai A Tvermoes, Thomas J Matthews, Michael L Greenberg, Mary K Delmedico
    posted to peptides experimental example by Evangelia on 2008-05-21 13:19:24 as **
  • U2AF-homology motif interactions are required for alternative splicing regulation by SPF45
    Nature Structural & Molecular Biology, Vol. 14, No. 7. (24 June 2007), pp. 620-629.
    by Lorenzo Corsini, Sophie Bonna, Jerome Basquin, Michael Hothorn, Klaus Scheffzek, Juan Valcárcel, Michael Sattler
    posted to peptides motifs experimental example by Evangelia on 2008-05-21 13:18:28 as **
  • Cellular prion protein regulates beta-secretase cleavage of the Alzheimer's amyloid precursor protein
    Proceedings of the National Academy of Sciences, Vol. 104, No. 26. (26 June 2007), pp. 11062-11067.
    by Edward T Parkin, Nicole T Watt, Ishrut Hussain, Elizabeth A Eckman, Christopher B Eckman, Jean C Manson, Herbert N Baybutt, Anthony J Turner, Nigel M Hooper
    posted to peptides experimental example by Evangelia on 2008-05-21 13:17:19 as ** along with 1 person applebyb
  • IQGAP1 modulates activation of B-Raf
    Proceedings of the National Academy of Sciences, Vol. 104, No. 25. (19 June 2007), pp. 10465-10469.
    by Jian-Guo Ren, Zhigang Li, David B Sacks
    posted to peptides experimental example by Evangelia on 2008-05-21 13:15:13 as **
  • Binding of Ras to Phosphoinositide 3-Kinase p110alpha Is Required for Ras- Driven Tumorigenesis in Mice.
    Cell, Vol. 129, No. 5. (1 June 2007), pp. 957-968.
    by S Gupta, AR Ramjaun, P Haiko, Y Wang, PH Warne, B Nicke, E Nye, G Stamp, K Alitalo, J Downward
    posted to peptides experimental example by Evangelia on 2008-05-21 13:14:15 as ** along with 2 people Terkko catcremona
  • Stopping Ras in Its Tracks
    Cell, Vol. 129, No. 5. (1 June 2007), pp. 855-857.
    by Channing J Der, Terry Van Dyke
    posted to peptides experimental example by Evangelia on 2008-05-21 13:13:18 as **
  • Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation
    Proceedings of the National Academy of Sciences, Vol. 104, No. 21. (22 May 2007), pp. 8785-8790.
    by Gang Zhao, Xiaoke Zhou, Liqun Wang, Guangtao Li, Hermann Schindelin, William J Lennarz
    posted to peptides experimental example by Evangelia on 2008-05-21 13:11:40 as **
  • Stabilization of RAD-51-DNA filaments via an interaction domain in Caenorhabditis elegans BRCA2
    Proceedings of the National Academy of Sciences, Vol. 104, No. 20. (15 May 2007), pp. 8299-8304.
    by Mark I Petalcorin, Vitold E Galkin, Xiong Yu, Edward H Egelman, Simon J Boulton
    posted to peptides experimental example cancer by Evangelia on 2008-05-21 13:09:37 as **
  • Role of intrinsic disorder in transient interactions of hub proteins
    Proteins, Vol. 66, No. 4. (1 March 2007), pp. 761-765.
    by GP Singh, M Ganapathi, D Dash
    posted to peptides interactions hubs disorder by Evangelia on 2008-05-19 18:05:21 as ***
  • Peptidomimetics, a synthetic tool of drug discovery
    Current Opinion in Chemical Biology, Vol. In Press, Corrected Proof
    by Josef Vagner, Hongchang Qu, Victor J Hruby
    posted to rev_ref review peptides drug-design by Evangelia on 2008-05-16 10:40:38 as ***
  • Specificity in Signal Transduction: From Phosphotyrosine-SH2 Domain Interactions to Complex Cellular Systems
    Cell, Vol. 116, No. 2. (23 January 2004), pp. 191-203.
    by Tony Pawson
    posted to signaling review phospho_peptides peptides by Evangelia on 2008-05-13 09:47:28 as ***** along with 1 person Borelli
  • Proteomic Screen Finds pSer/pThr-Binding Domain Localizing Plk1 to Mitotic Substrates
    Science, Vol. 299, No. 5610. (21 February 2003), pp. 1228-1231.
    by Andrew E Elia, Lewis C Cantley, Michael B Yaffe
    posted to rev_ref phospho_peptides peptides by Evangelia on 2008-05-13 09:44:57 as **
  • Identification and Rational Design of Novel Antimicrobial Peptides for Plant Protection.
    Annu Rev Phytopathol. (25 April 2008)
    by JF Marcos, A Muñoz, E Pérez-Payá, S Misra, B López-García
    posted to rev_ref peptides by Evangelia on 2008-05-12 15:38:24 as **
  • Small molecule modulation of p75 neurotrophin receptor functions.
    CNS Neurol Disord Drug Targets., Vol. 7, No. 1. (February 2008), pp. 63-70.
    by FM Longo, Massa
    posted to rev_ref peptides chemical_peptide by Evangelia on 2008-05-12 15:32:30 as *
  • High-Throughput Screen for Small Molecule Inhibitors of Mint1-PDZ Domains
    ASSAY and Drug Development Technologies, Vol. 5, No. 6. (2007), pp. 769-784.
    by Xuesong Chen, Jamie C Longgood, Carolyn Michnoff, Shuguang Wei, Doug E Frantz, Llya Bezprozvanny
    posted to rev_ref peptides chemical_peptide by Evangelia on 2008-05-12 15:26:08 as *
  • A curated compendium of phosphorylation motifs
    Nature Biotechnology, Vol. 25, No. 3., pp. 285-286.
    by Ramars Amanchy, Balamurugan Periaswamy, Suresh Mathivanan, Raghunath Reddy, Sudhir G Tattikota, Akhilesh Pandey
    posted to rev_ref phospho_peptides peptides database by Evangelia on 2008-05-12 14:59:36 as ** along with 3 people neils cjeans alwinpremanand
  • ASPD (Artificially Selected Proteins/Peptides Database): a database of proteins and peptides evolved in vitro
    Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 200-202.
    by Vadim P Valuev, Dmitry A Afonnikov, Mikhail P Ponomarenko, Luciano Milanesi, Nikolay A Kolchanov
    posted to rev_ref peptides database by Evangelia on 2008-05-12 14:50:13 as read
  • APD: the Antimicrobial Peptide Database
    Nucleic Acids Research, Vol. 32 (2004), pp. D590-D592.
    by Zhe Wang, Guangshun Wang
    posted to rev_ref peptides database by Evangelia on 2008-05-12 14:49:05 as read
  • SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins
    PLoS ONE, Vol. 3, No. 2. (3 October 2007), e967.
    by RJ Edwards, NE Davey, Shields
    posted to rev_ref peptides motifs by Evangelia on 2008-05-12 14:17:34 as read
  • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641.
    by JC Obenauer, LC Cantley, MB Yaffe
    posted to rev_ref phospho_peptides peptides by Evangelia on 2008-05-12 14:13:27 as ** along with 2 people neils mloewer
  • Insights into COPII Coat Nucleation from the Structure of Sec23-Sar1 Complexed with the Active Fragment of Sec31
    Developmental Cell, Vol. 13, No. 5. (6 November 2007), pp. 635-645.
    by Xiping Bi, Joseph D Mancias, Jonathan Goldberg
    posted to rev_ref peptides example by Evangelia on 2008-05-12 14:10:26 as read
  • The 20 years of PROSITE.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by N Hulo, A Bairoch, V Bulliard, L Cerutti, BA Cuche, E de Castro, C Lachaize, PS Langendijk-Genevaux, CJ Sigrist
    posted to rev_ref peptides database by Evangelia on 2008-05-12 14:05:29 as ** along with 2 people dullhunk hplatero
  • Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins.
    BMC Bioinformatics, Vol. 5 (22 June 2004)
    by F Diella, S Cameron, C Gemünd, R Linding, A Via, B Kuster, T Sicheritz-Pontén, N Blom, TJ Gibson
    posted to rev_ref phospho_peptides peptides database by Evangelia on 2008-05-12 13:58:22 as read along with 2 people chad_davis renatomilani
  • Small-molecule MDM2 antagonists reveal aberrant p53 signaling in cancer: implications for therapy.
    Proc Natl Acad Sci U S A, Vol. 103, No. 6. (7 February 2006), pp. 1888-1893.
    by C Tovar, J Rosinski, Z Filipovic, B Higgins, K Kolinsky, H Hilton, X Zhao, BT Vu, W Qing, K Packman, O Myklebost, DC Heimbrook, LT Vassilev
    posted to rev_ref peptides chemical_peptide by Evangelia on 2008-05-12 13:49:57 as ** along with 2 people yeastyboy sbiring
  • In vivo activation of the p53 pathway by small-molecule antagonists of MDM2.
    Science, Vol. 303, No. 5659. (6 February 2004), pp. 844-848.
    by LT Vassilev, BT Vu, B Graves, D Carvajal, F Podlaski, Z Filipovic, N Kong, U Kammlott, C Lukacs, C Klein, N Fotouhi, EA Liu
    posted to rev_ref peptides p53 by Evangelia on 2008-05-12 13:48:49 as ** along with 1 person sbiring
  • Enfuvirtide: the first therapy to inhibit the entry of HIV-1 into host CD4 lymphocytes
    Nat Rev Drug Discov, Vol. 3, No. 3. (March 2004), pp. 215-225.
    by Tom Matthews, Miklos Salgo, Michael Greenberg, Jain Chung, Ralph Demasi, Dani Bolognesi
    posted to rev_ref peptides drug-design by Evangelia on 2008-05-12 12:01:45 as **
  • Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface
    Nature, Vol. 450, No. 7170., pp. 741-744.
    by Xuewu Zhang, Kerry A Pickin, Ron Bose, Natalia Jura, Philip A Cole, John Kuriyan
    posted to rev_ref peptides kinases domain by Evangelia on 2008-05-12 10:59:35 as ***
  • Podophyllotoxin directly binds a hinge domain in E2 of HPV and inhibits an E2/E7 interaction in vitro
    Bioorganic & Medicinal Chemistry, Vol. In Press, Corrected Proof
    by Takeki Saitoh, Kouji Kuramochi, Takahiko Imai, Kei-Ichi Takata, Masahide Takehara, Susumu Kobayashi, Kengo Sakaguchi, Fumio Sugawara
    posted to rev_ref peptides hpv chemical_peptide application by Evangelia on 2008-05-12 10:16:00 as ***
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