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FBerkemeier's library [76 articles]

Recent papers added to FBerkemeier's library.
  • Fluorescence Spectroscopy of Single Biomolecules
    Science, Vol. 283, No. 5408. (12 March 1999), pp. 1676-1683.
    by Shimon Weiss
    posted to no-tag by FBerkemeier on 2006-02-15 09:46:25 as ** along with 2 people and 1 group rodney yusdi Kopelman_Group
  • Single-molecule protein folding: Diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2
    PNAS, Vol. 97, No. 10. (9 May 2000), pp. 5179-5184.
    by Ashok A Deniz, Ted A Laurence, Gangamani S Beligere, Maxime Dahan, Andrew B Martin, Daniel S Chemla, Philip E Dawson, Peter G Schultz, Shimon Weiss
    posted to no-tag by FBerkemeier on 2006-02-15 09:45:11 as ** along with 2 people seamus1089 yusdi
  • Single-Molecule Fluorescence Detection: Autocorrelation Criterion and Experimental Realization with Phycoerythrin
    PNAS, Vol. 86, No. 11. (1 June 1989), pp. 4087-4091.
    by Konan Peck, Lubert Stryer, Alexander N Glazer, Richard A Mathies
    posted to no-tag by FBerkemeier on 2006-02-15 09:43:07 as **
  • Fluorescence quenching: A tool for single-molecule protein-folding study
    PNAS, Vol. 97, No. 26. (19 December 2000), pp. 14241-14244.
    by Xiaowei Zhuang, Taekjip Ha, Harold D Kim, Thomas Centner, Siegfried Labeit, Steven Chu
    posted to no-tag by FBerkemeier on 2006-02-15 09:41:41 as ** along with 1 person yanjiang
  • Monitoring conformational dynamics of a single molecule by selective fluorescence spectroscopy
    PNAS, Vol. 95, No. 4. (17 February 1998), pp. 1556-1561.
    by C Eggeling, JR Fries, L Brand, R Gunther, CA M Seidel
    posted to no-tag by FBerkemeier on 2006-02-15 09:39:59 as **
  • Probing the interaction between two single molecules: Fluorescence resonance energy transfer between a single donor and a single acceptor
    PNAS, Vol. 93, No. 13. (25 June 1996), pp. 6264-6268.
    by T Ha, Th Enderle, DF Ogletree, DS Chemla, PR Selvin, S Weiss
    posted to no-tag by FBerkemeier on 2006-02-15 09:16:58 as ** along with 1 person yusdi
  • On/off blinking and switching behaviour of single molecules of green fluorescent protein
    Nature, Vol. 388, No. 6640. (24 July 1997), pp. 355-358.
    by Robert M Dickson, Andrew B Cubitt, Roger Y Tsien, WE Moerner
    posted to no-tag by FBerkemeier on 2006-02-15 09:15:44 as ** along with 1 person and 1 group melting moernerlab
  • Mechanical and chemical unfolding of a single protein: A comparison
    PNAS, Vol. 96, No. 7. (30 March 1999), pp. 3694-3699.
    by Mariano Carrion-Vazquez, Andres F Oberhauser, Susan B Fowler, Piotr E Marszalek, Sheldon E Broedel, Jane Clarke, Julio M Fernandez
    posted to no-tag by FBerkemeier on 2006-02-15 09:11:44 as ** along with 1 person ruudvanleeuwen
  • Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy
    Nature, Vol. 419, No. 6908. (17 October 2002), pp. 743-747.
    by Benjamin Schuler, Everett A Lipman, William A Eaton
    posted to no-tag by FBerkemeier on 2006-02-15 08:47:09 as ** along with 1 person yusdi
  • Multiple events on single molecules: Unbiased estimation in single-molecule biophysics
    PNAS, Vol. 103, No. 6. (7 February 2006), pp. 1750-1755.
    by Daniel A Koster, Chris H Wiggins, Nynke H Dekker
    posted to analysis data by FBerkemeier on 2006-02-08 13:32:09 as ** along with 3 people and 1 group melting sotaro samjlord moernerlab
  • Engineering and characterization of a superfolder green fluorescent protein
    Nature Biotechnology, Vol. 24, No. 1. (20 December 2005), pp. 79-88.
    by Jean-Denis Pédelacq, Stéphanie Cabantous, Timothy Tran, Thomas C Terwilliger, Geoffrey S Waldo
    posted to gfp protein superfolder by FBerkemeier on 2006-02-06 10:03:06 as **** along with 1 person sulfolob
  • The Kinase Domain of Titin Controls Muscle Gene Expression and Protein Turnover
    Science, Vol. 308, No. 5728. (10 June 2005), pp. 1599-1603.
    by Stephan Lange, Fengqing Xiang, Andrey Yakovenko, Anna Vihola, Peter Hackman, Elena Rostkova, Jakob Kristensen, Birgit Brandmeier, Gereon Franzen, Birgitta Hedberg, Lars G Gunnarsson, Simon M Hughes, Sylvie Marchand, Thomas Sejersen, Isabelle Richard, Lars Edstrom, Elisabeth Ehler, Bjarne Udd, Mathias Gautel
    posted to no-tag by FBerkemeier on 2006-01-30 14:40:30 as ***
  • Mechanically Induced Titin Kinase Activation Studied by Force-Probe Molecular Dynamics Simulations
    Biophys. J., Vol. 88, No. 2. (1 February 2005), pp. 790-804.
    by Frauke Grater, Jianhua Shen, Hualiang Jiang, Mathias Gautel, Helmut Grubmuller
    posted to no-tag by FBerkemeier on 2006-01-30 14:39:34 as *** along with 1 person choonpeng
  • Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions
    PNAS, Vol. 103, No. 1. (3 January 2006), pp. 93-98.
    by Mai S Li, Chin-Kun Hu, Dmitri K Klimov, D Thirumalai
    posted to no-tag by FBerkemeier on 2006-01-23 11:41:43 as ****
  • Fast imaging and fast force spectroscopy of single biopolymers with a new atomic force microscope designed for small cantilevers
    Review of Scientific Instruments, Vol. 70, No. 11. (1999), pp. 4300-4303.
    by MB Viani, TE Schaffer, GT Paloczi, LI Pietrasanta, BL Smith, JB Thompson, M Richter, M Rief, HE Gaub, KW Plaxco, AN Cleland, HG Hansma, PK Hansma
    posted to afm cantilever by FBerkemeier on 2006-01-17 10:03:59 as **
  • An atomic force microscope tip as a light source
    Review of Scientific Instruments, Vol. 76, No. 12. (2005)
    by Valentin Lulevich, Chris Honig, William A Ducker
    posted to afm photoluminiscence snom by FBerkemeier on 2006-01-16 15:57:37 as read
  • Direct observation of the three-state folding of a single protein molecule.
    Science, Vol. 309, No. 5743. (23 September 2005), pp. 2057-2060.
    by C Cecconi, EA Shank, C Bustamante, S Marqusee
    posted to folding protein by FBerkemeier on 2005-11-04 13:04:11 as ***** along with 2 people nigham ruudvanleeuwen
  • Influence of substrate binding on the mechanical stability of mouse dihydrofolate reductase.
    Biophys J, Vol. 89, No. 5. (November 2005)
    by JP Junker, K Hell, M Schlierf, W Neupert, M Rief
    posted to dhfr e22 mtx nadph by FBerkemeier on 2005-11-04 11:14:44 as read
  • Green fluorescent protein (GFP): Applications, structure, and related photophysical behavior
    Chemical Reviews, Vol. 102, No. 3. (2002), pp. 759-781.
    by M Zimmer
    posted to red cells chromophore crystal-structure dynamics energy-transfer excited-state fluorescence formation fusion gene in-vivo living molecules proteins reporter resonance single by FBerkemeier on 2005-11-04 11:12:00 as read
  • Optimum Settings for Automatic Controllers
    Transactions of ASME, Vol. 64 (1942), pp. 759-768.
    by JG Ziegler, NB Nichols
    posted to no-tag by FBerkemeier on 2005-11-04 11:12:00 as read
  • Single-molecule folding
    Current Opinion in Structural Biology, Vol. 13, No. 1. (2003), pp. 88-97.
    by XW Zhuang, M Rief
    posted to adhesion atomic-force bonds confocal dynamics energy-transfer microscopy molecules protein resonance rna spectroscopy titin transfer transitions by FBerkemeier on 2005-11-04 11:12:00 as read along with 1 person ruudvanleeuwen
  • Reversible Denaturation of Aequorea Green-Fluorescent Protein - Physical Separation and Characterization of the Renatured Protein
    Biochemistry, Vol. 21, No. 19. (1982), pp. 4535-4540.
    by WW Ward, SH Bokman
    posted to no-tag by FBerkemeier on 2005-11-04 11:12:00 as read
  • The green fluorescent protein
    Annaul Review of Biochemistry, Vol. 67 (1998), pp. 509-544.
    by RY Tsien
    posted to cells chromophore crystal-structure energy-transfer gene-expression gfp in-vitro living mammalian-cells mice microscopy resonance targeted transgenic by FBerkemeier on 2005-11-04 11:12:00 as read
  • Inferring the diameter of a biopolymer from its stretching response
    Biophysical Journal, Vol. 89, No. 1. (2005), pp. 80-86.
    by NM Toan, D Marenduzzo, C Micheletti
    posted to atomic-force chains dna-molecules elasticity knots microscopy molecular-dynamics polymers proteins semiflexible simulations single thickness titin by FBerkemeier on 2005-11-04 11:11:59 as read
  • The Scientist and Engineer's Guide to Digital Signal Processing
    (1999)
    by SW Smith
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Extraction, Purification and Properties of Aequorin, a Bioluminiscent Protein from Luminous Hydromedusan, Aequorea
    Journal of Cellular and Comparative Physiology, Vol. 59, No. 3. (1962)
    by O Shimomura, FH Johnson, Y Saiga
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • The folding pathway of a fast-folding immunoglobulin domain revealed by single-molecule mechanical experiments
    EMBO Reports, Vol. 6, No. 1. (2005), pp. 46-51.
    by I Schwaiger, M Schleicher, AA Noegel, M Rief
    posted to fibronectin iii kinetics modules protein stability transition ubiquitin by FBerkemeier on 2005-11-04 11:11:59 as read
  • The myosin coiled-coil is a truly elastic protein structure
    Nature Materials, Vol. 1, No. 4. (2002), pp. 232-235.
    by I Schwaiger, C Sattler, DR Hostetter, M Rief
    posted to force forces helix mechanics molecule molecules single skeletal-muscle spectroscopy titin transitions unfolding b-dna dna-molecules by FBerkemeier on 2005-11-04 11:11:59 as read
  • A mechanical unfolding intermediate in an actin-crosslinking protein
    Nature Structural & Molecular Biology, Vol. 11, No. 1. (2004), pp. 81-85.
    by I Schwaiger, A Kardinal, M Schleicher, AA Noegel, M Rief
    posted to abp120 afm atomic-force domain factor gelation microscopy modules repeats rod spectrin spectroscopy state titin by FBerkemeier on 2005-11-04 11:11:59 as read
  • Temperature Softening of a Protein in Single-molecule Experiments
    Journal of Molecular Biology (2005)
    by M Schlierf, M Rief
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 19. (2004), pp. 7299-7304.
    by M Schlierf, HB Li, JM Fernandez
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Untersuchung der Energielandschaft von Proteinen mittels Einzelmolekülkraftspektroskopie
    (2004)
    by M Schlierf
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Single molecule force spectroscopy on polysaccharides by atomic force microscopy
    Science, Vol. 275, No. 5304. (1997), pp. 1295-1297.
    by M Rief, F Oesterhelt, B Heymann, HE Gaub
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Reversible unfolding of individual titin immunoglobulin domains by AFM
    Science, Vol. 276, No. 5315. (1997), pp. 1109-1112.
    by M Rief, M Gautel, F Oesterhelt, JM Fernandez, HE Gaub
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Elastically coupled two-level systems as a model for biopolymer extensibility
    Physical Review Letters, Vol. 81, No. 21. (1998), pp. 4764-4767.
    by M Rief, JM Fernandez, HE Gaub
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:59 as read
  • Primary Structure of the Aequorea-Victoria Green-Fluorescent Protein
    Gene, Vol. 111, No. 2. (1992), pp. 229-233.
    by DC Prasher, VK Eckenrode, WW Ward, FG Prendergast, MJ Cormier
    posted to bioluminescence cloning energy-transfer hybridization libraries renilla sites by FBerkemeier on 2005-11-04 11:11:59 as read
  • Cellular motility driven by assembly and disassembly of actin filaments
    Cell, Vol. 112, No. 4. (2003), pp. 453-465.
    by TD Pollard, GG Borisy
    posted to 45-bisphosphate acanthamoeba actophorin adfcofilin aldrich-syndrome arp23 capping cofilin complex depolymerizing f-actin factor leading-edge n-wasp phosphatidylinositol protein wasp-family by FBerkemeier on 2005-11-04 11:11:58 as read
  • Stepwise unfolding of titin under force-clamp atomic force microscopy
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 2. (2001), pp. 468-472.
    by AF Oberhauser, PK Hansma, Carrion M Vazquez, JM Fernandez
    posted to dna elasticity protein by FBerkemeier on 2005-11-04 11:11:58 as read
  • Protein Folding Kinetics
    (1999)
    by B Nölting
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:58 as read
  • Certain Topics in Telegraph Transmission Theory
    Transactions of the American Institute of Electrical Engineers, Vol. 47 (April 1928), pp. 617-644.
    by H Nyquist
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:58 as read
  • Kontrolle und Analyse des mechanischen Entfaltungspfades des Grün Fluoreszierenden Proteins
    (2005)
    by M Mickler
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:58 as read
  • Structural basis for dimerization of the Dictyostelium gelation factor (ABP120) rod
    Nature Structural Biology, Vol. 6, No. 9. (1999), pp. 836-841.
    by AJ Mccoy, P Fucini, AA Noegel, M Stewart
    posted to abp-120 actin-binding cross-linking domain dynamics factor filamin immunoglobulin lacking motility proteins recognition superfamily by FBerkemeier on 2005-11-04 11:11:58 as read
  • Mechanical unfolding intermediates in titin modules
    Nature, Vol. 402, No. 6757. (1999), pp. 100-103.
    by PE Marszalek, H Lu, HB Li, Carrion M Vazquez, AF Oberhauser, K Schulten, JM Fernandez
    posted to cardiac domains elasticity extensibility force immunoglobulin-like modules molecular-dynamics myocytes protein region titin by FBerkemeier on 2005-11-04 11:11:58 as read
  • Chair-boat transitions in single polysaccharide molecules observed with force-ramp AFM
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 7. (2002), pp. 4278-4283.
    by PE Marszalek, HB Li, AF Oberhauser, JM Fernandez
    posted to adhesion bonds conformations elasticity microscopy pyranose ring spectroscopy strength by FBerkemeier on 2005-11-04 11:11:58 as read
  • Stretching DNA
    Macromolecules, Vol. 28, No. 26. (1995), pp. 8759-8770.
    by JF Marko, ED Siggia
    posted to charge dna double-stranded elasticity electrophoretic flexibility length molecular-weight persistence polyelectrolyte by FBerkemeier on 2005-11-04 11:11:56 as read
  • Regelungstechnik 1.
    (2001)
    by J Lunze
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:56 as read
  • Stretching response of discrete semiflexible polymers
    Macromolecules, Vol. 36, No. 10. (2003), pp. 3732-3744.
    by L Livadaru, RR Netz, HJ Kreuzer
    posted to atomic-force chains dna-molecules elasticity entropic filaments fluctuations length microscopy persistence polymers single spectroscopy statistics stiff by FBerkemeier on 2005-11-04 11:11:56 as read
  • How to Fold Graciously
    (1969), pp. 22-24.
    by Cyrus Levinthal
    edited by JTP Debrunnder, E Munck
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:56 as read
  • Röntgenuntersuchung Gelöster Fadenmoleküle
    Recueil des Travaux Chimiques des Pays-Bas-Journal of the Royal Netherlands Chemical Society, Vol. 68, No. 12. (1949), pp. 1106-1122.
    by O Kratky, G Porod
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:56 as read
  • Brownian motion in a field of force and the diffusion model of chemical reactions
    Physica, Vol. 7, No. 4. (1940), pp. 284-304.
    by HA Kramers
    posted to no-tag by FBerkemeier on 2005-11-04 11:11:56 as read
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