Garamonfok's positiveselection [28 articles] Export

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	Patterns of Positive Selection in Six Mammalian Genomes [My Copy] PLoS Genet, Vol. 4, No. 8. (1 August 2008), e1000144. by Carolin Kosiol, Tomáš Vinař, Rute R. da Fonseca, et al.Melissa J. Hubisz, Carlos D. Bustamante, Rasmus Nielsen, Adam Siepel posted to signatures positiveselection mammals by Garamonfok on 2009-11-03 11:32:57 as along with 11 people daveGerrard ilyashl diamantis renewang skembel madreach bpcusack gjuggler cabbagesofdoom djkt hdopazo
	Positive selection at the protein network periphery: Evaluation in terms of structural constraints and cellular context [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 51. (18 December 2007), pp. 20274-20279. by Philip M. Kim, Jan O. Korbel, Mark B. Gerstein posted to positiveselection pathway adaptativeevolution by Garamonfok on 2009-11-01 20:41:48 as along with 11 people lptolik daveGerrard diamantis renewang guhjy tmmurali grahamc cjeans mingzhi minostro wilbur
	Interrogating a High-Density SNP Map for Signatures of Natural Selection [My Copy] Genome Research, Vol. 12, No. 12. (1 December 2002), pp. 1805-1814. by Joshua M. Akey, Ge Zhang, Kun Zhang, Li Jin, Mark D. Shriver posted to snp signatures printed positiveselection naturalselection fst by Garamonfok on 2009-10-19 14:59:40 as along with 5 people and 1 group renewang kieran101 hdopazo JBEgwa01 iris42 BioinfoCIPF
	Confounding between recombination and selection, and the Ped/Pop method for detecting selection [My Copy] Genome Research, Vol. 18, No. 8. (10 August 2008), pp. 1304-1313. by Paul F. OâReilly, Ewan Birney, David J. Balding posted to recombination printed positiveselection population_genomics method human by Garamonfok on 2009-10-19 11:58:54 as along with 1 person djkt
	Inference of Positive and Negative Selection on the 5' Regulatory Regions of Drosophila Genes [My Copy] Mol Biol Evol, Vol. 21, No. 2. (1 February 2004), pp. 374-383. by Michael H. Kohn, Shu Fang, Chung-I Wu posted to drosophila positiveselection promotors by Garamonfok on 2009-07-29 10:33:33 as along with 2 people and 2 groups adepace cisevol EisenLab cis-regulatory-evolution
	Detecting selection in noncoding regions of nucleotide sequences. [My Copy] Genetics, Vol. 167, No. 2. (June 2004), pp. 949-958. by W. S. Wong, R. Nielsen posted to positiveselection promotors by Garamonfok on 2009-07-23 18:37:34 as along with 2 people and 1 group djkt cisevol cis-regulatory-evolution
	Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes [My Copy] Genome Research, Vol. 9, No. 18. (September 2008), pp. 1393-1402. by R. A. Studer, S. Penel, L. Duret, M. Robinson-Rechavi edited by Genome Research posted to vertebrate printed positiveselection duplication by Garamonfok on 2008-09-01 16:08:42 as
	Mechanisms and Rates of Birth and Death of Dispersed Duplicated Genes during the Evolution of a Multigene Family in Diploid and Tetraploid Wheats [My Copy] Molecular Biology and Evolution, Vol. 24, No. 2. (February 2007), pp. 539-550. by Akhunov, D. Eduard, Akhunova, R. Alina, Dvorak, Jan posted to printed positiveselection hyphy evolution by Garamonfok on 2008-03-14 13:15:51 as
	Quaternary Structure Constraints on Evolutionary Sequence Divergence [My Copy] Mol Biol Evol, Vol. 24, No. 2. (1 February 2007), pp. 349-351. by Maria S. Fornasari, Gustavo Parisi, Julian Echave posted to tools printed positiveselection hyphy evolution by Garamonfok on 2008-03-14 13:14:57 as along with 2 people dfdong zwang
	Function and evolution of a gene family encoding odorant binding-like proteins in a social insect, the honey bee (Apis mellifera) [My Copy] Genome Res., Vol. 16, No. 11. (1 November 2006), pp. 1404-1413. by Sylvain Foret, Ryszard Maleszka posted to tools printed positiveselection hyphy evolution apis by Garamonfok on 2008-03-14 13:09:40 as
	Sheep Mitochondrial DNA Variation in European, Caucasian, and Central Asian Areas [My Copy] Mol Biol Evol, Vol. 23, No. 9. (1 September 2006), pp. 1776-1783. by Miika Tapio, Nurbiy Marzanov, Mikhail Ozerov, et al.Mirjana Cinkulov, Galina Gonzarenko, Tatyana Kiselyova, Maciej Murawski, Haldja Viinalass, Juha Kantanen posted to printed positiveselection mitochondrial hyphy evolution by Garamonfok on 2008-03-14 13:06:40 as along with 1 person Montrachet
	Robust inference of positive selection from recombining coding sequences [My Copy] Bioinformatics, Vol. 22, No. 20. (15 October 2006), pp. 2493-2499. by Konrad Scheffler, Darren P. Martin, Cathal Seoighe posted to tools printed positiveselection hyphy evolution by Garamonfok on 2008-03-14 13:02:26 as along with 3 people MRCBIRD operon Natasha
	Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection [My Copy] Mol Biol Evol, Vol. 22, No. 5. (1 May 2005), pp. 1208-1222. by Sergei L. Kosakovsky Pond, Simon D. W. Frost posted to printed positiveselection hyphy evolution by Garamonfok on 2008-03-14 13:00:08 as along with 6 people and 1 group rvosa druvus operon BioNica marck gjuggler FAB-lab
	Evidence for positive selection on the E2 gene of bovine viral diarrhoea virus type 1 [My Copy] Virus Genes, Vol. 35, No. 3. (24 December 2007), pp. 629-634. by Fangqiang Tang, Chuyu Zhang posted to virus printed positiveselection paml evolution by Garamonfok on 2008-03-11 10:17:25 as
	Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome. [My Copy] PLoS Comput Biol, Vol. 2, No. 4. (April 2006) by L. Arbiza, J. Dopazo, H. Dopazo posted to evolution positiveselection by Garamonfok on 2008-03-06 11:05:32 as along with 5 people and 3 groups operon marcius jordibc hdopazo rvosa BioinfoCIPF SGU-CIPF FAB-lab
	Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection [My Copy] Molecular Biology and Evolution, Vol. 22, No. 4. (April 2005), pp. 1107-1118. by Ziheng Yang, Wendy S. Wong, Rasmus Nielsen posted to printed positiveselection paml evolution by Garamonfok on 2008-03-05 18:01:13 as along with 6 people and 1 group rabu BioNica Natasha stajich skumagai CharlesM Mycology
	Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. [My Copy] Mol Biol Evol, Vol. 17, No. 1. (January 2000), pp. 32-43. by Z. Yang, R. Nielsen posted to printed positiveselection paml evolution by Garamonfok on 2008-03-05 17:57:19 as along with 9 people and 1 group katholt bjorns fernan hdopazo BioNica timflutre ankur_iitg RamuAnandakrishnan Ema BioinfoCIPF
	Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. [My Copy] Mol Biol Evol, Vol. 19, No. 6. (June 2002), pp. 908-917. by Z. Yang, R. Nielsen posted to printed positiveselection paml evolution by Garamonfok on 2008-03-05 17:56:01 as along with 5 people and 2 groups clearbluespring skembel stevanspringer operon stajich FAB-lab Mycology
	Frequent False Detection of Positive Selection by the Likelihood Method with Branch-Site Models [My Copy] Mol Biol Evol, Vol. 21, No. 7. (1 July 2004), pp. 1332-1339. by Jianzhi Zhang posted to printed positiveselection paml evolution branch-site by Garamonfok on 2008-03-05 17:53:04 as along with 1 person and 1 group rvosa FAB-lab
	Evaluation of an Improved Branch-Site Likelihood Method for Detecting Positive Selection at the Molecular Level [My Copy] Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2472-2479. by Jianzhi Zhang, Rasmus Nielsen, Ziheng Yang posted to printed positiveselection paml evolution branch-site by Garamonfok on 2008-03-05 17:51:05 as along with 9 people and 1 group gjuggler atphan BioNica clearbluespring stevanspringer AaronDarling usagi-kirin mingzhi CharlesM FAB-lab
	Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. [My Copy] Molecular biology and evolution, Vol. 15, No. 5. (May 1998), pp. 568-573. by Z. Yang posted to printed positiveselection paml evolution by Garamonfok on 2008-03-05 17:46:09 as along with 3 people gjuggler AaronDarling usagi-kirin
	Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites [My Copy] Genetics, Vol. 155, No. 1. (1 May 2000), pp. 431-449. by Ziheng Yang, Rasmus Nielsen, Nick Goldman, Anne-Mette K. Pedersen posted to printed positiveselection paml evolution by Garamonfok on 2008-03-05 17:43:51 as along with 8 people druvus fernan BioNica Natasha dylan77 tale gjuggler emptyhb
	Recombination in AIDS viruses. [My Copy] J Mol Evol, Vol. 40, No. 3. (March 1995), pp. 249-259. by D. L. Robertson, B. H. Hahn, P. M. Sharp posted to adaptiveevolution evolution paml positiveselection by Garamonfok on 2008-03-05 17:42:25 as along with 1 person mishar
	The genomic rate of adaptive evolution. [My Copy] Trends in ecology & evolution (Personal edition), Vol. 21, No. 10. (October 2006), pp. 569-575. by Adam Eyre-Walker posted to review printed positiveselection mktest evolution adaptiveevolution by Garamonfok on 2008-02-19 13:06:16 as along with 5 people and 3 groups gjuggler druvus stevanspringer aprasad dchughes FAB-lab G4ID Genetics-of-Gambling
	Natural selection on protein-coding genes in the human genome [My Copy] Nature, Vol. 437, No. 7062. (20 October 2005), pp. 1153-1157. by Carlos D. Bustamante, Adi Fledel-Alon, Scott Williamson, et al.Rasmus Nielsen, Melissa T. Hubisz, Stephen Glanowski, David M. Tanenbaum, Thomas J. White, John J. Sninsky, Ryan D. Hernandez, Daniel Civello, Mark D. Adams, Michele Cargill, Andrew G. Clark posted to evolution mendelian positiveselection snp by Garamonfok on 2008-02-09 15:59:43 as along with 26 people and 5 groups rvosa JAShapiro tomhebbron VGreiff ilyashl athma provero jimithystok gjuggler renewang jo_davies stevanspringer operon jwortman aprasad dayjm balajis marcius dpollard hdopazo djkt JBEgwa01 ramensky iris42 dmc shoshin EisenLab FAB-lab BioinfoCIPF SGU-CIPF Durbin group
	Recent and ongoing selection in the human genome [My Copy] Nat Rev Genet, Vol. 8, No. 11. (01 November 2007), pp. 857-868. by Rasmus Nielsen, Ines Hellmann, Melissa Hubisz, Carlos Bustamante, Andrew G. Clark posted to review project_funcanalysis printed positiveselection human evolution by Garamonfok on 2008-02-09 15:56:21 as along with 10 people and 1 group ilyashl renewang kndiaye dchughes ramensky candypmcg ryanraaum bpcusack lh3 gjuggler Durbin group
	Initial sequence of the chimpanzee genome and comparison with the human genome. [My Copy] Nature, Vol. 437, No. 7055. (1 September 2005), pp. 69-87. by The Chimpanzee Sequencing Consortium posted to positiveselection evolution chimpanzee by Garamonfok on 2008-02-09 15:51:41 as along with 12 people and 3 groups rshe ThomasDOtto cannin chrn aprasad great_apes indigoviolet dullhunk djkt JeffR100 iris42 rvosa biodiversity_conservation EisenLab FAB-lab
	Human PAML browser: a database of positive selection on human genes using phylogenetic methods. [My Copy] Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008) by G. C. Nickel, D. Tefft, M. D. Adams posted to tools printed positiveselection paml evolution database by Garamonfok on 2008-02-09 15:43:26 as along with 2 people diamantis operon

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evolution	119
printed	75
tools	41
mirna	33
promotors	33
positiveselection	28
expression	28
cancer	23
statistics	22
genome	22
mammals	17
coexpression	13
coevolution	12
drosophila	11
aberations	11
paml	10
human	10
function	9
cgh	8
project_funcanalysis	8
project_coexcoev	8
hyphy	8
adaptiveevolution	8
method	7
encode	6
interaction	6
adaptativeevolution	5
snp	5
gerp	5
go	4
recombination	4
database	4
signatures	4
annotation	4
population_genomics	4
naturalselection	4
oddscore	3
bacteria	3
project_ratemutanalysismamals	3
phenotypes	3
duplication	3
neutral	3
review	3
sex	3
fusion	3
primates	3
phylome	3
rate	3
colocalisation	3
mrna-structure	3
immuno	2
vertebrate	2
vertebrates	2
nonconding	2
fst	2
adaptation	2
disease	2
gccontent	2
worms	2
mendelian	2
rrtree	2
affymetrix500k	2
modules	2
phylogeny	2
branch-site	2
pathway	2
generalknowledge	2
metabolic_network	2
bgc	2
eukaryotes	1
ortholog_paralog	1
ecoli	1
adh	1
snow	1
fitness	1
genedesert	1
pleiotropy	1
simulation	1
fdr	1
chromatin	1
mktest	1
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exon	1
mcdonald_kreitman	1
orthologous	1
pattern	1
5c	1
longest_not_better	1
noncoding	1
chimpanzee	1
virus	1
apis	1
rejectedsubstitution	1
non-synonimous	1
metabolism	1
amplification	1
levelofselection	1
nullmutation	1
colcalisation	1
chromatinestructure	1
imprinting	1
chapter	1
olfactory	1
proteinlength	1
microsatellite	1
mitochondrial	1
butterflies	1
mouse	1
modeltest	1

Garamonfok's positiveselection [28 articles] Export

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