GustavoLacerda's library 457 articles Export

	Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 221. by Joshua Bloom, Zia Khan, Leonid Kruglyak, Mona Singh, Amy Caudy posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:47:00 as along with 8 people and 1 group heliopais GeeSharpMinor n00c TRHvidsten natstreet druvus dswan neils Bioinformatics
	Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms [My Copy] Nucl. Acids Res., Vol. 36, No. 21. (1 December 2008), e141. by Peter A. C. 't Hoen, Yavuz Ariyurek, Helene H. Thygesen, et al.Erno Vreugdenhil, Rolf H. A. M. Vossen, Renee X. de Menezes, Judith M. Boer, Gert-Jan B. van Ommen, Johan T. den Dunnen posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:45:25 as along with 23 people stubrown GeeSharpMinor n00c guhjy hcoller daed poschm stsaft azazello jfr slevy03 felsani usagi-kirin shikin coela cthachuk ojabado caseybrown abizar natstreet druvus rschulz pengchy
	Conservation of divergent transcription in fungi [My Copy] Trends in Genetics, Vol. 24, No. 5. (May 2008), pp. 207-211. by Philip R. Kensche, Martin Oti, Bas E. Dutilh, Martijn A. Huynen posted to fungi by GustavoLacerda on 2009-10-14 18:43:18 as along with 2 people and 1 group stajich nklee Mycology
	Homothallic and heterothallic mating in the opportunistic pathogen Candida albicans. [My Copy] Nature, Vol. 460, No. 7257. (13 August 2009), pp. 890-893. by Kevin Alby, Dana Schaefer, Richard J. Bennett posted to fungi by GustavoLacerda on 2009-10-14 18:42:09 as along with 2 people and 2 groups stajich Annab Mycology Journal picks
	Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. [My Copy] Genome research, Vol. 19, No. 10. (28 October 2009), pp. 1722-1731. by Thomas J. Sharpton, Jason E. Stajich, Steven D. Rounsley, et al.Malcolm J. Gardner, Jennifer R. Wortman, Vinita S. Jordar, Rama Maiti, Chinnappa D. Kodira, Daniel E. Neafsey, Qiandong Zeng, Chiung-Yu Y. Hung, Cody McMahan, Anna Muszewska, Marcin Grynberg, M. Alejandra Mandel, Ellen M. Kellner, Bridget M. Barker, John N. Galgiani, Marc J. Orbach, Theo N. Kirkland, Garry T. Cole, Matthew R. Henn, Bruce W. Birren, John W. Taylor posted to genome fungi comparative_genomics by GustavoLacerda on 2009-10-14 18:41:48 as along with 5 people and 1 group bcondon druvus ramonvidal kiekyon stajich Mycology
	Sequence assembly [My Copy] Computational Biology and Chemistry, Vol. 33, No. 2. (April 2009), pp. 121-136. by K. Scheibye-Alsing, S. Hoffmann, A. Frankel, et al.P. Jensen, P. F. Stadler, Y. Mang, N. Tommerup, M. J. Gilchrist, A. B. Nygård, S. Cirera posted to assembly by GustavoLacerda on 2009-10-14 18:41:11 as along with 8 people n00c katholt orzenil guhjy natstreet Thaverkamp robsyme druvus
	CNV-seq, a new method to detect copy number variation using high-throughput sequencing. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 80. by Chao Xie, Martti T. Tammi posted to ngs by GustavoLacerda on 2009-10-14 18:38:39 as along with 17 people and 1 group biovils stubrown cthachuk n00c darian bmenten natstreet sameersoi svenrahmann xiechao semrich pkonings rdiaz dswan sleepingcell neils magusina Bioinformatics
	OrthoMCL: identification of ortholog groups for eukaryotic genomes. [My Copy] Genome research, Vol. 13, No. 9. (September 2003), pp. 2178-2189. by Li Li, Christian J. Stoeckert, David S. Roos posted to genefamilies by GustavoLacerda on 2009-10-14 18:36:07 as along with 15 people and 2 groups biomcgary sjcockell thegoose2 nlapalu dullhunk natstreet druvus tharris mdimmic operon indigoviolet AaronDarling bluto maximilianh ninch C. elegans / WormBase EisenLab
	Optimal spliced alignments of short sequence reads [My Copy] Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i174-180. by Fabio De Bona, Stephan Ossowski, Korbinian Schneeberger, Gunnar Ratsch posted to splicing ngs alignment by GustavoLacerda on 2009-10-14 18:35:54 as along with 12 people and 1 group darshan n00c natstreet druvus lukaswindhager malcook jmcq nmohelli caseybrown cthachuk Ema Neeperando SIMR bioinformatics
	JIGSAW: integration of multiple sources of evidence for gene prediction [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3596-3603. by Jonathan E. Allen, Steven L. Salzberg posted to genefinding by GustavoLacerda on 2009-10-14 18:35:30 as along with 5 people and 1 group azazello jmartin49 indigoviolet stajich wenhan EisenLab
	Funybase: a Fungal phylogenomic database [My Copy] BMC Bioinformatics, Vol. 9 (27 October 2008), 456. by Sylvain Marthey, Gabriela Aguileta, Francois Rodolphe, et al.Annie Gendrault, Tatiana Giraud, Elisabeth Fournier, Manuela Lopez-Villavicencio, Angelique Gautier, Marc-Henri Lebrun, Helene Chiapello posted to genefamilies fungi by GustavoLacerda on 2009-10-14 18:34:39 as along with 6 people and 1 group fungal nlapalu ojabado druvus stajich nklee Mycology
	Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 9. (3 March 2009), pp. 3264-3269. by Moran Yassour, Tommy Kaplan, Hunter B. Fraser, et al.Joshua Z. Levin, Jenna Pfiffner, Xian Adiconis, Gary Schroth, Shujun Luo, Irina Khrebtukova, Andreas Gnirke, Chad Nusbaum, Dawn-Anne Thompson, Nir Friedman, Aviv Regev posted to transcriptome ngs by GustavoLacerda on 2009-10-14 18:34:16 as along with 7 people and 1 group fstrozzi stubrown jfr stajich GeeSharpMinor jmcq provero Mycology
	Genome structure of a Saccharomyces cerevisiae strain widely used in bioethanol production [My Copy] Genome Research (7 October 2009) by Juan L. Argueso, Marcelo F. Carazzolle, Piotr A. Mieczkowski, et al.Fabiana M. Duarte, Osmar V. C. Netto, Silvia K. Missawa, Felipe Galzerani, Gustavo G. L. Costa, Ramon O. Vidal, Melline F. Noronha, Margaret Dominska, Maria G. S. Andrietta, SÃlvio R. Andrietta, Anderson F. Cunha, Luiz H. Gomes, Flavio C. A. Tavares, AndrÃ© R. Alcarde, Fred S. Dietrich, John H. McCusker, Thomas D. Petes, GonÃ§alo A. G. Pereira posted to lge fungi by GustavoLacerda on 2009-10-13 06:29:39 as along with 2 people PaulaBO kshameer
	Identification and characterization of a class III chitin synthase gene of Moniliophthora perniciosa, the fungus that causes witches' broom disease of cacao. [My Copy] Journal of microbiology (Seoul, Korea), Vol. 47, No. 4. (1 August 2009), pp. 431-440. by Catiane S. Souza, Bruno M. Oliveira, Gustavo G. Costa, et al.Albert Schriefer, Alessandra Selbach-Schnadelbach, Ana Paula P. Uetanabaro, Carlos P. Pirovani, Gonçalo A. Pereira, Alex G. Taranto, Júlio Cézar de C. Cascardo, Aristóteles Góes-Neto posted to lge fungi by GustavoLacerda on 2009-10-13 06:27:28 as
	Establishing a successful bioinformatics core facility team. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000368. by Fran Lewitter, Michael Rebhan posted to bioinformatics by GustavoLacerda on 2009-10-08 21:39:55 as along with 20 people and 5 groups fgibson daforerog zwang natstreet sobolevnrm orzenil kongl jago druvus kiekyon nuin operon aprasad chrisamiller dswan reyez djkt GeeSharpMinor barry ppgardne Convention on Knowledge Commons structural_bioinformatics McCammon Bioinformatics Journal picks
	The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing [My Copy] Science, Vol. 320, No. 5881. (6 June 2008), pp. 1344-1349. by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, et al.Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder posted to transcriptome ngs by GustavoLacerda on 2009-10-08 21:39:34 as along with 22 people and 1 group debasis dbensasson cfvillalta rdowell poschm jmcq waszak michaelbarton djkt urgi stajich semrich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack guhjy shurjo Mycology
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted to ngs assembly by GustavoLacerda on 2009-10-08 21:39:09 as along with 16 people and 2 groups cthachuk jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten djkt hpaces APRegier pengchy natstreet druvus darian iSEEM Bioinformatics
	SOAP2: an improved ultrafast tool for short read alignment [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1966-1967. by Ruiqiang Li, Chang Yu, Yingrui Li, et al.Tak-Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang posted to ngs alignment by GustavoLacerda on 2009-10-08 21:38:40 as along with 25 people and 6 groups agbiotec torfinnnome natstreet cthachuk jforment adijr bozdagd stubrown polivares guhjy ollieredfernwork operon cassj adamjamesreid Stew jamselem dswan idonaldson TRHvidsten humburg djkt farhat n00c jmeppley druvus Bioinformatics Core Service BergmanLab Orengo Group Journal Picks Bioinformatics - CRUK Bioinformatics Journal picks
	A fast hybrid short read fragment assembly algorithm [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2279-2280. by Bertil Schmidt, Ranjan Sinha, Bryan Beresford-Smith, Simon J. Puglisi posted to ngs assembly by GustavoLacerda on 2009-10-08 21:38:01 as along with 14 people and 2 groups cthachuk orzenil APRegier dakelley katholt GeeSharpMinor dayjm djkt dswan pachorip natstreet druvus n00c jmeppley Bioinformatics Journal picks
	RNA-Seq: a revolutionary tool for transcriptomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to transcriptome ngs by GustavoLacerda on 2009-10-08 21:37:06 as along with 37 people maren jwfoley urgi RNA-protein cthachuk heliopais rdiaz TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto burak natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor
	Natural history and evolutionary principles of gene duplication in fungi [My Copy] Nature, Vol. 449, No. 7158. (06 September 2007), pp. 54-61. by Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Regev posted to fungi comparative_genomics by GustavoLacerda on 2009-10-08 21:36:47 as along with 19 people and 4 groups bcondon biomcgary gdb schwartzjmc keb45 gjuggler aheilbut dpollard tny dchughes djkt stajich zwang lp2 tzhughes maximilianh pkm bpcusack dandaman EisenLab G4ID Genetics-of-Gambling Mycology
	De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R94. by Scott DiGuistini, Nancy Liao, Darren Platt, et al.Gordon Robertson, Michael Seidel, Simon Chan, T. Roderick Docking, Inanc Birol, Robert Holt, Martin Hirst, Elaine Mardis, Marco Marra, Richard Hamelin, Jorg Bohlmann, Colette Breuil, Steven Jones posted to genome fungi by GustavoLacerda on 2009-10-08 21:22:38 as along with 9 people and 2 groups sotacam gillianturgeon natstreet druvus jamselem sujaikumar kiekyon ppgardne stajich Journal picks Mycology
	Annotating genomes with massive-scale RNA sequencing. [My Copy] Genome biology, Vol. 9, No. 12. (2008), R175. by France Denoeud, Jean-Marc M. Aury, Corinne Da Silva, et al.Benjamin Noel, Odile Rogier, Massimo Delledonne, Michele Morgante, Giorgio Valle, Patrick Wincker, Claude Scarpelli, Olivier Jaillon, François Artiguenave posted to transcriptome ngs by GustavoLacerda on 2009-10-08 21:22:18 as along with 19 people and 1 group cthachuk jamselem n00c jonilaserson ghattem nlapalu jmcq dandaman abizar dakelley inesdesantiago mhamada pengchy balicea fhalbrit GeeSharpMinor natstreet druvus neils SIMR bioinformatics
	Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses. [My Copy] Genome research, Vol. 19, No. 4. (April 2009), pp. 521-532. by Melissa J. Fullwood, Chia-Lin L. Wei, Edison T. Liu, Yijun Ruan posted to ngs by GustavoLacerda on 2009-10-08 21:20:48 as along with 18 people and 1 group cthachuk jandot inesdesantiago mkiyer rschulz guhjy lp2 natstreet druvus absterga coela hpaces orzenil idoerg behindtherabbit nuin djkt jbhiatt Chinnaiyan Lab
	Combined Evidence Annotation of Transposable Elements in Genome Sequences [My Copy] PLoS Comput Biol, Vol. 1, No. 2. (29 July 2005), e22. by Hadi Quesneville, Casey M. Bergman, Olivier Andrieu, et al.Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere posted to transposons by GustavoLacerda on 2009-10-08 21:20:30 as along with 12 people and 2 groups orzenil natstreet treangen operon briann aprasad dpollard timflutre stajich urgi yoanjacquemin ArtemPankin LabDros EisenLab
	Genome assembly reborn: recent computational challenges [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 354-366. by Mihai Pop posted to ngs assembly by GustavoLacerda on 2009-10-08 21:18:41 as along with 28 people and 1 group cthachuk n00c agbiotec shabhonam pachorip APRegier jmcq stevebs jonilaserson michaelbarton inesdesantiago GeeSharpMinor bertelsen aprasad ananta_samudra sandfire jmeppley mlangill fgibson ppgardne TRHvidsten pengchy robsyme nuin kiekyon natstreet druvus idoerg Journal picks
	The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis [My Copy] Nature, Vol. 452, No. 7183. (6 March 2008), pp. 88-92. by F. Martin, A. Aerts, D. Ahren, et al.A. Brun, E. G. J. Danchin, F. Duchaussoy, J. Gibon, A. Kohler, E. Lindquist, V. Pereda, A. Salamov, H. J. Shapiro, J. Wuyts, D. Blaudez, M. Buee, P. Brokstein, B. Canback, D. Cohen, P. E. Courty, P. M. Coutinho, C. Delaruelle, J. C. Detter, A. Deveau, S. Difazio, S. Duplessis, L. Fraissinet-Tachet, E. Lucic, P. Frey-Klett, C. Fourrey, I. Feussner, G. Gay, J. Grimwood, P. J. Hoegger, P. Jain, S. Kilaru, J. Labbe, Y. C. Lin, V. Legue, F. Le Tacon, R. Marmeisse, D. Melayah, B. Montanini, M. Muratet, U. Nehls, H. Niculita-Hirzel, Oudot-Le M. P. Secq, M. Peter, H. Quesneville, B. Rajashekar, M. Reich, N. Rouhier, J. Schmutz, T. Yin, M. Chalot, B. Henrissat, U. Kues, S. Lucas, Y. Van de Peer, G. K. Podila, A. Polle, P. J. Pukkila, P. M. Richardson, P. Rouze, I. R. Sanders, J. E. Stajich, A. Tunlid, G. Tuskan, I. V. Grigoriev posted to genome fungi by GustavoLacerda on 2009-10-08 21:18:24 as along with 11 people and 1 group mKnobel stajich natstreet maren neils alexl biomcgary cmzmasek urgi jamselem manzanita Mycology
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted to ngs by GustavoLacerda on 2009-10-08 21:16:51 as along with 24 people and 2 groups tonamswish inesdesantiago Thaverkamp idonaldson heliopais owhitney ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil operon guhjy kongl stajich n00c torfinnnome nuin kshameer neils druvus natstreet BergmanLab Mycology
	Aggressive assembly of pyrosequencing reads with mates [My Copy] Bioinformatics, Vol. 24, No. 24. (15 December 2008), pp. 2818-2824. by Jason R. Miller, Arthur L. Delcher, Sergey Koren, et al.Eli Venter, Brian P. Walenz, Anushka Brownley, Justin Johnson, Kelvin Li, Clark Mobarry, Granger Sutton posted to ngs assembly by GustavoLacerda on 2009-10-08 21:16:37 as along with 17 people and 2 groups n00c APRegier jonilaserson dakelley idoerg orzenil ela503 natstreet druvus azazello acn jasontsai jmeppley cisevol malcook Neeperando djkt BergmanLab SIMR bioinformatics
	Evaluation of next generation sequencing platforms for population targeted sequencing studies [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R32. by Olivier Harismendy, Pauline Ng, Robert Strausberg, et al.Xiaoyun Wang, Timothy Stockwell, Karen Beeson, Nicholas Schork, Sarah Murray, Eric Topol, Samuel Levy, Kelly Frazer posted to ngs by GustavoLacerda on 2009-10-08 21:15:42 as along with 22 people and 2 groups dbensasson adijr agbiotec jgill darian jandot n00c jonilaserson maren inesdesantiago mlog ppgardne kiekyon michaelbarton idoerg stajich skembel giovanni druvus lwaldron djkt natstreet Journal picks Mycology
	Benchmarking next-generation transcriptome sequencing for functional and evolutionary genomics [My Copy] Mol Biol Evol (25 August 2009), msp188. by John G. Gibbons, Eric M. Janson, Chris T. Hittinger, Mark Johnston, Patrick Abbot, Antonis Rokas posted to transcriptome ngs assembly by GustavoLacerda on 2009-10-08 21:05:32 as along with 6 people and 1 group mlog kiekyon biomcgary stajich natstreet druvus Mycology
	ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads [My Copy] Genome Biology, Vol. 10, No. 10. (1 October 2009), R103. by Iain MacCallum, Dariusz Przybylski, Sante Gnerre, et al.Joshua Burton, Ilya Shlyakhter, Andreas Gnirke, Joel Malek, Kevin McKernan, Swati Ranade, Terrance Shea, Louise Williams, Sarah Young, Chad Nusbaum, David Jaffe posted to ngs assembly by GustavoLacerda on 2009-10-08 21:04:45 as along with 10 people and 1 group djkt n00c azazello dakelley jgill ramonvidal justinhjohnson stajich druvus neils Mycology
	Assisted assembly: how to improve a de novo genome assembly by using related species [My Copy] Genome Biology, Vol. 10, No. 8. (2009), R88. by Sante Gnerre, Eric Lander, Kerstin L. Toh, David Jaffe posted to assembly by GustavoLacerda on 2009-08-27 17:01:08 as along with 17 people and 2 groups operon fstrozzi kiekyon torfinnnome dakelley jamselem err129 djkt darian APRegier thegoose danmaclean stajich natstreet neils druvus avilella Mycology Journal picks
	De novo transcriptome assembly with ABySS [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2872-2877. by Inanc Birol, Shaun D. Jackman, Cydney B. Nielsen, et al.Jenny Q. Qian, Richard Varhol, Greg Stazyk, Ryan D. Morin, Yongjun Zhao, Martin Hirst, Jacqueline E. Schein, Doug E. Horsman, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra, Steven J. M. Jones posted to transcriptome ngs by GustavoLacerda on 2009-08-21 17:30:17 as along with 9 people dswan dakelley torfinnnome TRHvidsten rtogawa ramonvidal stubrown darshan druvus
	Transposable elements in Coffea (Gentianales: Rubiacea) transcripts and their role in the origin of protein diversity in flowering plants [My Copy] Molecular Genetics and Genomics, Vol. 279, No. 4. (1 April 2008), pp. 385-401. by Fabrício Lopes, Marcelo Carazzolle, Gonçalo Pereira, Carlos Colombo, Claudia Carareto posted to lge transposons by GustavoLacerda on 2009-08-21 15:58:35 as along with 4 people and 1 group ramonvidal natstreet cisevol kiara BergmanLab
	Gene expression profiles underlying alternative caste phenotypes in a highly eusocial bee, <i> Melipona quadrifasciata</i> [My Copy] Insect Molecular Biology, Vol. 15, No. 1. (February 2006), pp. 33-44. by C. C. Judice, M. F. Carazzole, F. Festa, M. C. Sogayar, K. Hartfelder, G. A. G. Pereira posted to lge by GustavoLacerda on 2009-08-21 15:57:44 as
	Control by sugar of <i>Saccharomyces cerevisiae</i> flocculation for industrial ethanol production [My Copy] FEMS Yeast Research, Vol. 6, No. 2. (2006), pp. 280-287. by Anderson F. Cunha, Silvia K. Missawa, Luiz H. Gomes, Sérgio F. Reis, Gonçalo A. G. Pereira posted to lge fungi biotech by GustavoLacerda on 2009-08-21 15:51:23 as
	Production of Calcium Oxalate Crystals by the Basidiomycete Moniliophthora perniciosa, the Causal Agent of Witches’ Broom Disease of Cacao [My Copy] Current Microbiology, Vol. 56, No. 4. (1 April 2008), pp. 363-370. by Maria Rio, Bruno de Oliveira, Daniela de Tomazella, José Silva, Gonçalo Pereira posted to lge fungi by GustavoLacerda on 2009-08-21 15:46:26 as
	The Golden Bridge for Nature: The New Biology Applied to Bioplastics [My Copy] Polymer Reviews, Vol. 49, No. 2. (2009), pp. 85-106. by Johana Rincones, Ane F. Zeidler, Maria C. Grassi, Marcelo F. Carazzolle, Gonçalo A. G. Pereira posted to lge biotech by GustavoLacerda on 2009-08-21 15:45:34 as
	Genetics and Molecular Biology - The glyceraldehyde-3-phosphate dehydrogenase gene of Moniliophthora perniciosa, the causal agent of witches' broom disease of Theobroma cacao [My Copy] Genetics and Molecular Biology, Vol. 32, No. 2. (2009) by Juliana O. Lima, Jorge F. Pereira, Johana Rincones, et al.Joan G. Barau, Elza F. Araújo, Gonçalo A. G. Pereira, Marisa V. Queiroz posted to lge fungi by GustavoLacerda on 2009-08-21 15:45:07 as
	Electrophoretic karyotype analysis of Crinipellis perniciosa, the causal agent of witches' broom disease of Theobroma cacao [My Copy] Mycological Research, Vol. 107, No. 4. (April 2003), pp. 452-458. by J. Rincones posted to lge fungi by GustavoLacerda on 2009-08-21 15:39:40 as
	Characterization of necrosis and ethylene-inducing proteins (NEP) in the basidiomycete Moniliophthora perniciosa, the causal agent of witches' broom in Theobroma cacao [My Copy] Mycological Research, Vol. 111, No. 4. (April 2007), pp. 443-455. by Odalys Garcia, Joci A. N. Macedo, Ricardo Tibúrcio, et al.Gustavo Zaparoli, Johana Rincones, Livia M. C. Bittencourt, Geruza O. Ceita, Fabienne Micheli, Abelmon Gesteira, Andréa C. Mariano posted to lge fungi by GustavoLacerda on 2009-08-21 15:39:30 as
	Biochemical changes during the development of witches' broom: the most important disease of cocoa in Brazil caused by Crinipellis perniciosa [My Copy] J. Exp. Bot., Vol. 56, No. 413. (1 March 2005), pp. 865-877. by L. M. Scarpari, L. W. Meinhardt, P. Mazzafera, et al.A. W. V. Pomella, M. A. Schiavinato, J. C. M. Cascardo, G. A. G. Pereira posted to lge fungi by GustavoLacerda on 2009-08-21 15:39:07 as
	Genetic variability and chromosome-length polymorphisms of the witches' broom pathogen Crinipellis perniciosa from various plant hosts in South America [My Copy] Mycological Research, Vol. 110, No. 7. (July 2006), pp. 821-832. by J. Rincones, G. Mazotti, G. Griffith, et al.A. Pomela, A. Figueira, G. Lealjr, M. Queiroz, J. Pereira, R. Azevedo, G. Pereira posted to lge fungi by GustavoLacerda on 2009-08-21 15:36:47 as
	In Vitro Production of Biotrophic-Like Cultures of Crinipellis perniciosa, the Causal Agent of Witches’ Broom Disease of Theobroma cacao [My Copy] Current Microbiology, Vol. 52, No. 3. (27 March 2006), pp. 191-196. by Lyndel Meinhardt, Cláudia Bellato, Johana Rincones, Ricardo Azevedo, Julio Cascardo, Gonçalo Pereira posted to lge fungi by GustavoLacerda on 2009-08-21 15:34:42 as
	The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109kb in size and contains a stable integrated plasmid [My Copy] Mycological Research, Vol. 112, No. 10. (October 2008), pp. 1136-1152. by E. Formighieri, R. Tiburcio, E. Armas, et al.F. Medrano, H. Shimo, N. Carels, A. Goesneto, C. Cotomacci, M. Carazzolle, N. Sardinhapinto posted to lge mitochondria fungi by GustavoLacerda on 2009-08-21 15:32:05 as
	Genetics and Molecular Biology - Gene projects: a genome web tool for ongoing mining and annotation applied to CitEST [My Copy] Genetics and Molecular Biology, Vol. 30, No. 3. (2007) by Marcelo F. Carazzolle, Eduardo F. Formighieri, Luciano A. Digiampietri, Marcos R. R. Araujo, Gustavo G. L. Costa, Gonçalo A. G. Pereira posted to lge transcriptome genomics bioinformatics by GustavoLacerda on 2009-08-21 15:08:29 as
	Brazilian coffee genome project: an EST-based genomic resource [My Copy] by Luiz Gonzaga, Esteves Vieira, Alan C. Andrade, et al.Carlos A. Colombo, Ana H. De Araújo, Ângela Metha, Angélica C. De Oliveira, Carlos A. Labate, Celso L. Marino, A. De Barros monteiro-Vitorello, De Castro Monte, Éder Giglioti, Edna T. Kimura, C. Jorge, Érika V. S. Albuquerque, Felipe R. Da Silva, Felipe Vinecky, Haiko E. Sawazaki, Hamza Fahmi, A. Dorry, Helaine Carrer, Ilka N. Abreu, João A. N. Batista, João B. Teixeira, A. Paulo Kitajima, Karem G. Xavier, Liziane M. De Lima, Luis Eduardo, Aranha Camargo, A. Romano, Marcos A. Machado, Marcos Mota, Carmo Costa, Maria Fátima, Grossi Sá, Helena S. Goldman, Maria Inês, T. Ferro, Maria Laine, Penha Tinoco, Mariana C. Oliveira, Suzana N. Santos, Walter J. Siqueira, Gustavo Gilson, Lacerda Costa, Eduardo Fern posted to lge transcriptome cofee by GustavoLacerda on 2009-08-21 14:57:21 as
	De Novo Next Generation Sequencing of Plant Genomes [My Copy] Rice, Vol. 2, No. 1. (1 March 2009), pp. 35-43. by Steve Rounsley, Pradeep Marri, Yeisoo Yu, et al.Ruifeng He, Nick Sisneros, Jose Goicoechea, So Lee, Angelina Angelova, Dave Kudrna, Meizhong Luo, Jason Affourtit, Brian Desany, James Knight, Faheem Niazi, Michael Egholm, Rod Wing posted to ngs genome by GustavoLacerda on 2009-08-21 14:15:49 as along with 4 people ramonvidal natstreet druvus orzenil
	PanGEA: Identification of allele specific gene expression using the 454 technology [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 143. by Robert Kofler, Tatiana T. Torres, Tamas Lelley, Christian Schlotterer posted to snp 454 by GustavoLacerda on 2009-08-21 14:13:58 as along with 5 people and 1 group orzenil natstreet dswan rschulz AlexBateman Bioinformatics

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fungi	80
genefinding	73
regulation	57
ngs	50
assembly	36
genomics	32
454	25
snake	25
microrna	24
lge	21
genome	19
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genefamilies	14
alignment	13
est	12
est2genome	11
ricinus	11
comparative_genomics	10
bioinformatics	9
transposons	9
intron	8
mitochondria	8
systems_biology	7
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rip	5
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repeat	4
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antisense_transcription	3
codon_usage	3
hgt	3
metagenomics	3
philogeny	3
proteomics	3
snp	3
biotech	2
cacao	2
cerato	2
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compression	2
cowpea	2
epigenetics	2
p450	2
rnaseq	2
sequence_logo	2
statistics	2
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venom	2
bioperl	1
brain	1
chip	1
cofee	1
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lizard	1
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motif	1
necrosis	1
nucleosome	1
pca	1
phylogenomics	1
plasmid	1
resequencing	1
schizophrenia	1
screening	1
synteny	1
synthetic_biology	1
targeting	1
weblogo	1

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