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GustavoLacerda's assembly [12 articles]

Recent papers added to GustavoLacerda's library classified by the tag assembly. You can also see everyone's assembly.
  • Genome assembly forensics: finding the elusive mis-assembly
    Genome Biology, Vol. 9 (14 March 2008), R55.
    by Adam M Phillippy, Michael C Schatz, Mihai Pop
    posted to assembly 454 by GustavoLacerda on 2008-07-07 13:50:55 as ** along with 3 people Neeperando fernan lp2
  • EagleView: a genome assembly viewer for next-generation sequencing technologies.
    Genome research (11 June 2008)
    by Weichun Huang, Gabor T T Marth
    posted to assembly 454 by GustavoLacerda on 2008-06-30 15:52:26 as ** along with 5 people balicea Neeperando APRegier fpattyn bcondon
  • ALLPATHS: De novo assembly of whole-genome shotgun microreads.
    Genome Res (13 March 2008)
    by Jonathan Butler, Iain Maccallum, Michael Kleber, Ilya A A Shlyakhter, Matthew K K Belmonte, Eric S S Lander, Chad Nusbaum, David B B Jaffe
    posted to assembly by GustavoLacerda on 2008-05-27 16:23:29 as ** along with 9 people and 1 group GeeSharpMinor iris42 tharris sharpton Neeperando jwhitney stajich azazello hpaces Berkeley Mycology
  • Velvet: Algorithms for De Novo Short Read Assembly Using De Bruijn Graphs
    Genome Res. (18 March 2008), gr.074492.107.
    by Daniel Zerbino, Ewan Birney
    posted to assembly by GustavoLacerda on 2008-05-27 16:22:52 as ** along with 6 people and 1 group iris42 tharris sharpton farhat Neeperando stajich Berkeley Mycology
  • EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome.
    Nucleic Acids Res (1 April 2007)
    by Monica Jain, Jeff Shrager, Elizabeth H H Harris, Renee Halbrook, Arthur R R Grossman, Charles Hauser, Olivier Vallon
    posted to est2genome est assembly by GustavoLacerda on 2008-05-07 16:16:13 as ** along with 1 group Bioinformatics
  • Quality scores and SNP detection in sequencing-by-synthesis systems
    Genome Res. (22 January 2008), gr.070227.107.
    by William Brockman, Pablo Alvarez, Sarah Young, Manuel Garber, Georgia Giannoukos, William L Lee, Carsten Russ, Eric S Lander, Chad Nusbaum, David B Jaffe
    posted to assembly 454 by GustavoLacerda on 2008-05-06 18:20:19 as ** along with 5 people caseybrown dbensasson sharpton Neeperando bpb
  • The Genome Assembly Archive: A New Public Resource
    PLoS Biology, Vol. 2, No. 9. (1 September 2004), e285.
    by Steven L Salzberg, Deanna Church, Michael Dicuccio, Eugene Yaschenko, James Ostell
    posted to assembly by GustavoLacerda on 2008-03-14 14:22:09 as ** along with 1 person and 1 group tpreeprem gatech-compgenomics
  • SOAP: short oligonucleotide alignment program.
    Bioinformatics (28 January 2008)
    by Ruiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang
    posted to assembly by GustavoLacerda on 2008-03-14 14:21:05 as ** along with 6 people urgi caseybrown jyuh ghattem niallhaslam mdimon
  • Bioinformatics challenges of new sequencing technology
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Mihai Pop, Steven L Salzberg
    posted to 454 assembly by GustavoLacerda on 2008-03-13 20:04:53 as ** along with 9 people tharris mariakmejia jfr Neeperando jmeppley dchughes djkt niallhaslam urgi
  • A machine-learning approach to combined evidence validation of genome assemblies
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 744-750.
    by Jeong-Hyeon Choi, Sun Kim, Haixu Tang, Justen Andrews, Don G Gilbert, John K Colbourne
    posted to assembly by GustavoLacerda on 2008-03-13 19:55:37 as ** along with 4 people bertelsen ttuechler tharris Neeperando
  • OSLay: optimal syntenic layout of unfinished assemblies
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1573-1579.
    by Daniel C Richter, Stephan C Schuster, Daniel H Huson
    posted to 454 assembly by GustavoLacerda on 2008-02-07 17:23:06 as **
  • SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing.
    Genome Res, Vol. 17, No. 11. (November 2007), pp. 1697-1706.
    by Juliane C C Dohm, Claudio Lottaz, Tatiana Borodina, Heinz Himmelbauer
    posted to assembly by GustavoLacerda on 2008-01-31 17:07:52 as ** along with 8 people and 1 group iris42 jwhitney timflutre stajich ghattem azazello niallhaslam flexer Berkeley Mycology
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