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Hosna's Mathews [7 articles]

Recent papers posted to Hosna's library by the author Mathews. You can also see everyone's Mathews.
  • Efficient parameter estimation for RNA secondary structure prediction.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by Mirela Andronescu, Anne Condon, Holger H H Hoos, David H H Mathews, Kevin P P Murphy
    posted to estimation parameter by Hosna on 2007-12-19 19:44:23 as *** along with 2 groups Bioinformatics beta
  • Predicting oligonucleotide affinity to nucleic acid targets.
    RNA, Vol. 5, No. 11. (November 1999), pp. 1458-1469.
    by DH Mathews, ME Burkard, SM Freier, JR Wyatt, DH Turner
    posted to rnai rna-rna by Hosna on 2007-10-09 18:57:58 as ***** along with 1 person stsaft
  • Coaxial Stacking of Helixes Enhances Binding of Oligoribonucleotides and Improves Predictions of RNA Folding
    PNAS, Vol. 91, No. 20. (27 September 1994), pp. 9218-9222.
    by Ae Walter, Dh Turner, J Kim, Mh Lyttle, P Muller, Dh Mathews, M Zuker
    posted to wabi by Hosna on 2007-05-01 23:49:32 as **
  • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure,
    Journal of Molecular Biology, Vol. 288, No. 5. (21 May 1999), pp. 911-940.
    by David H Mathews, Jeffrey Sabina, Michael Zuker, Douglas H Turner
    posted to wabi by Hosna on 2007-05-01 23:43:27 as **
  • Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure.
    Proc Natl Acad Sci U S A, Vol. 101, No. 19. (11 May 2004), pp. 7287-7292.
    by DH Mathews, MD Disney, JL Childs, SJ Schroeder, M Zuker, DH Turner
    posted to secondary_structure_prediction data chemical_modification by Hosna on 2007-01-22 00:37:13 as read along with 4 people and 1 group austin eckart_bindewald arcticrasta condon beta
  • Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization.
    RNA, Vol. 10, No. 8. (August 2004), pp. 1178-1190.
    by DH Mathews
    posted to partition_function wabi by Hosna on 2006-11-16 20:04:37 as read along with 5 people and 1 group austin evaf arcticrasta condon Kiarostami beta
  • Predicting RNA secondary structure by free energy minimization
    Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), Vol. 116, No. 1-3. (May 2006), pp. 160-168.
    by David Mathews
    posted to hierarchical_folding wabi by Hosna on 2006-07-13 20:39:14 as read along with 5 people and 3 groups marcius condon hesam cthachuk apop beta BioinfoCIPF SGU-CIPF
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