LeightonP's library 101 articles Export

	Targeting malaria virulence and remodeling proteins to the host erythrocyte. [My Copy] Science, Vol. 306, No. 5703. (10 December 2004), pp. 1930-1933. by M. Marti, R. T. Good, M. Rug, E. Knuepfer, A. F. Cowman posted to functional-prediction interaction secretome virulence by LeightonP on 2006-06-30 09:39:55 as along with 2 people and 2 groups ana Sharpshoot structural_bioinformatics Bioinformatics
	A Host-Targeting Signal in Virulence Proteins Reveals a Secretome in Malarial Infection [My Copy] Science, Vol. 306, No. 5703. (10 December 2004), pp. 1934-1937. by N. Luisa Hiller, Souvik Bhattacharjee, Christiaan van Ooij, et al.Konstantinos Liolios, Travis Harrison, Carlos Lopez-Estrano, Kasturi Haldar posted to functional-prediction interaction secretome virulence by LeightonP on 2006-06-30 09:39:18 as along with 2 people badi shuzhens
	Host-parasite coevolutionary conflict between Arabidopsis and downy mildew. [My Copy] Science, Vol. 306, No. 5703. (10 December 2004), pp. 1957-1960. by R. L. Allen, P. D. Bittner-Eddy, L. J. Grenville-Briggs, et al.J. C. Meitz, A. P. Rehmany, L. E. Rose, J. L. Beynon posted to arabidopsis evolution interaction peronospora secretome virulence by LeightonP on 2006-06-30 09:38:22 as along with 1 person saru
	The alternative sigma factor HrpL negatively modulates the flagellar system in the phytopathogenic bacterium Erwinia amylovora under hrp-inducing conditions. [My Copy] FEMS Microbiol Lett, Vol. 257, No. 2. (April 2006), pp. 221-227. by S. Cesbron, J. P. Paulin, M. Tharaud, M. A. Barny, M. N. Brisset posted to amylovora bacteria erwinia hrp regulation t3ss transcription virulence by LeightonP on 2006-06-30 09:36:36 as
	Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae. [My Copy] Mol Microbiol, Vol. 54, No. 4. (November 2004), pp. 921-934. by J. Kim, J. G. Kim, Y. Kang, et al.J. Y. Jang, G. J. Jog, J. Y. Lim, S. Kim, H. Suga, T. Nagamatsu, I. Hwang posted to bacteria qs regulation t3ss transcription virulence by LeightonP on 2006-06-30 09:35:18 as
	Cell-penetrating peptides--a brief introduction. [My Copy] Biochim Biophys Acta, Vol. 1758, No. 3. (March 2006), pp. 260-263. by P. Järver, U. Langel posted to interaction prediction protein regulation sequence-structure-function transduction virulence by LeightonP on 2006-06-27 15:33:11 as
	Transduction peptides within naturally occurring proteins. [My Copy] Sci STKE, Vol. 2005, No. 313. (6 December 2005) by A. Joliot posted to interaction plant-pathogen protein sequence-structure-function transduction virulence by LeightonP on 2006-06-27 15:32:11 as
	TFExplorer: integrated analysis database for predicted transcription regulatory elements. [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 548-550. by J. Kim, J. Seo, Y. S. Lee, S. Kim posted to databases regulation transcription by LeightonP on 2006-06-07 10:47:19 as
	Modelling cellular systems with PySCeS. [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 560-561. by B. G. Olivier, J. M. Rohwer, J. H. Hofmeyr posted to mca modelling sysbio by LeightonP on 2006-06-06 13:09:57 as
	Prediction of protein-protein interactions by docking methods. [My Copy] Curr Opin Struct Biol, Vol. 12, No. 1. (February 2002), pp. 28-35. by G. R. Smith, M. J. Sternberg posted to algorithm genetic-algorithms interaction prediction protein structure by LeightonP on 2006-04-10 16:23:35 as along with 2 people bicko selrac
	Mutual Information in Protein Multiple Sequence Alignments Reveals Two Classes of Coevolving Positions† [My Copy] Biochemistry, Vol. 44, No. 19. (1 May 2005), pp. 7156-7165. by Gregory B. Gloor, Louise C. Martin, Lindi M. Wahl, Stanley D. Dunn posted to algorithm covariation evolution information-theory protein structure by LeightonP on 2006-04-04 14:08:41 as along with 3 people dfdong jengeldk nirfriedman
	A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli. [My Copy] Genome Res, Vol. 14, No. 2. (February 2004), pp. 201-208. by M. L. Bulyk, A. M. McGuire, N. Masuda, G. M. Church posted to bacteria prediction regulation transcription by LeightonP on 2006-03-29 09:40:44 as along with 3 people wowalz kaarsinogen sconlan
	Signaling in biological systems: insights from communication theory [My Copy] Journal of Theoretical Biology, Vol. 224, No. 3. (7 October 2003), pp. 411-412. by N. Rezaei-Ghaleh posted to information-theory interaction modelling networks qs regulation signal-transduction by LeightonP on 2006-02-08 12:31:27 as
	Evolutionary Analysis of the Two-Component Systems in Pseudomonas aeruginosa PAO1 [My Copy] Journal of Molecular Evolution, Vol. 59, No. 6. (December 2004), pp. 725-737. by Chen, Ying-Tsong, Chang, et al. Hwan, Lu, Chin, Peng, Hwei-Ling posted to bacteria comparative genomics pseudomonas regulation by LeightonP on 2006-01-25 15:51:05 as along with 2 people Sjitprasutwit comb
	BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data. [My Copy] Genome Biol, Vol. 3, No. 8. (15 July 2002) by L. H. Saal, C. Troein, J. Vallon-Christersson, S. Gruvberger, A. Borg, C. Peterson posted to databases microarrays by LeightonP on 2006-01-25 11:11:28 as along with 2 people kittipat csardas
	Fundamental issues in systems biology. [My Copy] Bioessays, Vol. 27, No. 12. (December 2005), pp. 1270-1276. by Maureen A A. O'malley, John Dupré posted to philosophy sysbio by LeightonP on 2006-01-23 15:45:10 as along with 5 people monod eweaver wnpx biosv maralena
	Benefits and pitfalls of using microarrays to monitor bacterial gene expression during infection. [My Copy] Curr Opin Microbiol, Vol. 7, No. 3. (June 2004), pp. 277-282. by J. C. Hinton, I. Hautefort, S. Eriksson, A. Thompson, M. Rhen posted to bacteria microarrays transcription by LeightonP on 2006-01-23 14:38:26 as
	Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. [My Copy] Plant Physiol, Vol. 138, No. 3. (July 2005), pp. 1195-1204. by B. Usadel, A. Nagel, O. Thimm, et al.H. Redestig, O. E. Blaesing, N. Palacios-Rojas, J. Selbig, J. Hannemann, M. C. Piques, D. Steinhauser, W. R. Scheible, Y. Gibon, R. Morcuende, D. Weicht, S. Meyer, M. Stitt posted to arabidopsis metabolomics microarrays proteomics visualisation by LeightonP on 2006-01-23 14:20:12 as along with 2 people udivi aconesa
	GenomeDiagram: a Python package for the visualisation of large-scale genomic data. [My Copy] Bioinformatics (23 December 2005) by Leighton Pritchard, Jennifer A A. White, Paul R J R. Birch, Ian K K. Toth posted to alignment comparative genome genomics visualisation by LeightonP on 2006-01-23 13:59:58 as along with 1 person daforerog
	MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. [My Copy] Plant J, Vol. 37, No. 6. (March 2004), pp. 914-939. by O. Thimm, O. Bläsing, Y. Gibon, et al.A. Nagel, S. Meyer, P. Krüger, J. Selbig, L. A. Müller, S. Y. Rhee, M. Stitt posted to arabidopsis metabolomics microarrays proteomics visualisation by LeightonP on 2006-01-23 13:59:01 as along with 2 people eweaver pmendes
	Trafficking arms: oomycete effectors enter host plant cells. [My Copy] Trends Microbiol, Vol. 14, No. 1. (January 2006), pp. 8-11. by P. R. Birch, A. P. Rehmany, L. Pritchard, S. Kamoun, J. L. Beynon posted to infestans interaction peronospora phytophthora plant-pathogen ramorum sojae by LeightonP on 2006-01-23 13:58:18 as along with 1 person jess_m
	VMD: a community annotation database for oomycetes and microbial genomes. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. Tripathy, V. N. Pandey, B. Fang, F. Salas, B. M. Tyler posted to databases phytophthora ramorum sojae by LeightonP on 2006-01-20 10:32:04 as
	Phytophthora functional genomics database (PFGD): functional genomics of phytophthora-plant interactions. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by K. Gajendran, M. D. Gonzales, A. Farmer, et al.E. Archuleta, J. Win, M. E. Waugh, S. Kamoun posted to databases infestans phytophthora sojae by LeightonP on 2006-01-20 10:01:44 as
	Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor. [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 4. (19 February 2002), pp. 2275-2280. by D. E. Fouts, R. B. Abramovitch, J. R. Alfano, et al.A. M. Baldo, C. R. Buell, S. Cartinhour, A. K. Chatterjee, M. D'Ascenzo, M. L. Gwinn, S. G. Lazarowitz, N. C. Lin, G. B. Martin, A. H. Rehm, D. J. Schneider, K. van Dijk, X. Tang, A. Collmer posted to hr interaction plant-pathogen pseudomonas syringae t3ss virulence by LeightonP on 2005-12-12 16:34:59 as
	Pseudomonas syringae pv. tomato type III effectors AvrPto and AvrPtoB promote ethylene-dependent cell death in tomato [My Copy] The Plant Journal, Vol. 44, No. 1. (October 2005), pp. 139-154. by Jonathan R. Cohn, Gregory B. Martin posted to hr interaction plant-pathogen pseudomonas syringae t3ss virulence by LeightonP on 2005-12-12 12:44:29 as along with 1 person mloewer
	Visualization for genomics: the Microbial Genome Viewer. [My Copy] Bioinformatics, Vol. 20, No. 11. (22 July 2004), pp. 1812-1814. by R. Kerkhoven, F. H. van Enckevort, J. Boekhorst, D. Molenaar, R. J. Siezen posted to genome visualisation by LeightonP on 2005-12-09 11:45:46 as
	GenoMap, a circular genome data viewer. [My Copy] Bioinformatics, Vol. 19, No. 12. (12 August 2003), pp. 1583-1584. by N. Sato, S. Ehira posted to genome visualisation by LeightonP on 2005-12-09 11:45:18 as
	Circular genome visualization and exploration using CGView. [My Copy] Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 537-539. by P. Stothard, D. S. Wishart posted to genome visualisation by LeightonP on 2005-12-09 11:44:50 as
	GenomeViz: visualizing microbial genomes. [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (15 December 2004) by R. Ghai, T. Hain, T. Chakraborty posted to genome visualisation by LeightonP on 2005-12-09 11:44:16 as
	Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 31. (2 August 2005), pp. 11064-11069. by H. Feil, W. S. Feil, P. Chain, et al.F. Larimer, G. DiBartolo, A. Copeland, A. Lykidis, S. Trong, M. Nolan, E. Goltsman, J. Thiel, S. Malfatti, J. E. Loper, A. Lapidus, J. C. Detter, M. Land, P. M. Richardson, N. C. Kyrpides, N. Ivanova, S. E. Lindow posted to comparative genomics plant-pathogen virulence by LeightonP on 2005-11-10 16:05:06 as along with 2 people shabhonam pachorip
	Analysis of promoters recognized by HrpL, an alternative sigma-factor protein from Pantoea agglomerans pv. gypsophilae. [My Copy] Mol Plant Microbe Interact, Vol. 18, No. 7. (July 2005), pp. 634-643. by G. Nissan, S. Manulis, D. M. Weinthal, G. Sessa, I. Barash posted to bacteria hrp regulation t3ss virulence by LeightonP on 2005-11-09 15:52:19 as
	Bacterial type two secretion system secreted proteins: double-edged swords for plant pathogens. [My Copy] Mol Plant Microbe Interact, Vol. 18, No. 9. (September 2005), pp. 891-898. by G. Jha, R. Rajeshwari, R. V. Sonti posted to erwinia plant-pathogen t2ss virulence by LeightonP on 2005-11-01 17:09:44 as
	Identifying type III effectors of plant pathogens and analyzing their interaction with plant cells. [My Copy] Curr Opin Microbiol, Vol. 6, No. 1. (February 2003), pp. 20-28. by J. T. Greenberg, B. A. Vinatzer posted to hr pseudomonas syringae t3ss virulence by LeightonP on 2005-10-07 12:05:42 as along with 1 person mloewer
	Suppression of host defense in compatible plant-Pseudomonas syringae interactions [My Copy] Current Opinion in Plant Biology, Vol. 8, No. 4. (August 2005), pp. 361-368. by Kinya Nomura, Maeli Melotto, Sheng-Yang He posted to arabidopsis coronatine hr syringae t3ss virulence by LeightonP on 2005-09-28 12:09:36 as along with 1 person saru
	Systems biology, integrative biology, predictive biology. [My Copy] Cell, Vol. 121, No. 4. (20 May 2005), pp. 505-506. by Edison T. Liu posted to sysbio by LeightonP on 2005-09-07 12:00:53 as along with 4 people lpfernandes bertelsen wnpx biosv
	Towards cellular systems in 4D. [My Copy] Cell, Vol. 121, No. 4. (20 May 2005), pp. 507-509. by P. Bork, L. Serrano posted to sysbio by LeightonP on 2005-09-07 11:38:36 as along with 1 person Doug
	Systems biology: its practice and challenges. [My Copy] Cell, Vol. 121, No. 4. (20 May 2005), pp. 511-513. by Alan Aderem posted to sysbio by LeightonP on 2005-09-07 11:08:18 as along with 4 people and 2 groups Badger wnpx biosv carmaus dIEMoSIRIS MoSi-Rostock
	The Meaning of Systems Biology [My Copy] Cell, Vol. 121, No. 4. (20 May 2005), pp. 503-504. by M. Kirschner posted to sysbio by LeightonP on 2005-09-05 16:11:05 as along with 5 people bertelsen ynaito wnpx biosv lpfernandes
	Gene finding in novel genomes [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (14 May 2004), 59. by Ian Korf posted to algorithm gene prediction by LeightonP on 2005-09-05 11:22:48 as along with 7 people and 1 group druvus jmartin49 indigoviolet wenhan GustavoLacerda cmzmasek alexl EisenLab
	GlimmerM, Exonomy and Unveil: three ab initio eukaryotic genefinders. [My Copy] Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3601-3604. by W. H. Majoros, M. Pertea, C. Antonescu, S. L. Salzberg posted to algorithm gene prediction by LeightonP on 2005-09-05 10:14:06 as along with 1 person wenhan
	Simple intrasequence difference (SID) analysis: an original method to highlight and rank sub-structural interfaces in protein folds. Application to the folds of bovine pancreatic trypsin inhibitor, phospholipase A2, chymotrypsin and carboxypeptidase A [My Copy] Protein Engineering, Vol. 16, No. 2. (February 2003), pp. 87-101. by Leighton Pritchard, Linda Cardle, Susanne Quinn, Mark Dufton posted to algorithm functional-prediction protein sequence-structure-function structure by LeightonP on 2005-07-21 11:06:47 as
	Do Proteins Learn to Evolve? The Hopfield Network as a Basis for the Understanding of Protein Evolution [My Copy] Journal of Theoretical Biology, Vol. 202, No. 1. (07 January 2000), pp. 77-86. by Leighton Pritchard, Mark J. Dufton posted to algorithm networks protein sequence-structure-function structure by LeightonP on 2005-07-21 11:04:14 as along with 3 people and 1 group stevanspringer pansapiens cmm FAB-lab
	Evolutionary trace analysis of the Kunitz/BPTI family of proteins: functional divergence may have been based on conformational adjustment [My Copy] Journal of Molecular Biology, Vol. 285, No. 4. (29 January 1999), pp. 1589-1607. by Leighton Pritchard, Mark J. Dufton posted to algorithm functional-prediction protein sequence-structure-function structure by LeightonP on 2005-07-21 11:03:28 as
	Web services in the life sciences [My Copy] Drug Discovery Today, Vol. 10, No. 12. (15 June 2005), pp. 865-871. by Vasa Curcin, Moustafa Ghanem, Yike Guo posted to web-services by LeightonP on 2005-07-21 10:57:44 as along with 7 people and 2 groups rdhyee nicklynch yas moborg fisherp Barend dullhunk Blog_and_Wiki_Research T_lab
	Bioinformatics Correctly Identifies Many Type III Secretion Substrates in the Plant Pathogen Pseudomonas syringae and the Biocontrol Isolate P.fluorescens SBW25 [My Copy] Molecular Plant-Microbe Interactions, Vol. 18, No. 8. (August 2005), pp. 877-888. by Boris A. Vinatzer, Joanna Jelenska, Jean T. Greenberg posted to bacteria comparative genomics plant-pathogen sequence by LeightonP on 2005-07-21 10:49:12 as along with 1 person mloewer
	Searching for functional sites in protein structures. [My Copy] Current opinion in chemical biology, Vol. 8, No. 1. (February 2004), pp. 3-7. by S. Jones, J. M. Thornton posted to covariation functional-prediction modelling protein sequence-structure-function structure by LeightonP on 2005-07-21 10:42:15 as along with 7 people and 1 group qluo BragilMassoud chrn Einat proteasome nickolay jwm structural_bioinformatics
	Extensive and specific responses of a eukaryote to bacterial quorum-sensing signals [My Copy] Proceedings of the National Academy of Sciences, USA, Vol. 100, No. 3. (4 February 2003), pp. 1444-1449. by Ulrike Mathesius, Susan Mulders, Mengsheng Gao, Max Teplitski, Gustavo Caetano-Anolles, Barry G. Rolfe posted to bacteria plant-pathogen proteomics qs regulation sysbio virulence by LeightonP on 2005-07-21 10:40:25 as
	The Language of Bacteria... and Just About Everything Else [My Copy] The Scientist (13 September 2004), pp. 26-27. by Kendra Rumbaugh posted to plant-pathogen qs regulation virulence by LeightonP on 2005-07-14 09:30:25 as
	Feedback dynamics and cell function: Why systems biology is called Systems Biology [My Copy] Molecular Biosystems, Vol. 1 (2005), pp. 14-16. by Olaf Wolkenhauer, Mihajlo Mesarovic posted to modelling sysbio by LeightonP on 2005-07-11 11:04:10 as along with 1 person Scis0000002
	Scoring functions for transcription factor binding site prediction [My Copy] BMC Bioinformatics, Vol. 6, No. 84. (2005) by Markus Friberg, Peter von Rohr, Gaston Gonnet posted to algorithm prediction regulation transcription by LeightonP on 2005-07-01 10:03:35 as

Note: You may cite this page as: http://www.citeulike.org/user/LeightonP

Result page: 1 2 3 Next

regulation	23
virulence	18
genomics	17
comparative	16
sysbio	15
transcription	15
plant-pathogen	14
protein	14
evolution	11
networks	11
bacteria	10
interaction	10
algorithm	8
sequence-structure-function	8
structure	8
erwinia	7
genome	7
modelling	7
phytophthora	7
t3ss	7
visualisation	7
arabidopsis	6
functional-prediction	6
microarrays	6
prediction	6
proteomics	6
covariation	4
databases	4
hr	4
infestans	4
metabolomics	4
pseudomonas	4
qs	4
secretome	4
syringae	4
alignment	3
information-theory	3
mca	3
peronospora	3
phylogenetics	3
rna	3
sequence	3
sojae	3
amylovora	2
atroseptica	2
chrysanthemi	2
coronatine	2
gene	2
genetic-algorithms	2
hrp	2
hsl	2
jasmonate	2
ramorum	2
retrotransposons	2
signal-transduction	2
similarity	2
sine	2
transduction	2
wrky	2
yeast	2
bayesian	1
carotovora	1
cell-division	1
data-model	1
directed-evolution	1
glycolysis	1
hmm	1
iron	1
lgt	1
lux	1
machine-learning	1
meg	1
ncrna	1
pcr	1
philosophy	1
siderophore	1
srna	1
streptococcus	1
t2ss	1
taxonomy	1
web-services	1

LeightonP's library 101 articles Export

LeightonP's tags