MarcoAlvarez's gene-ontology [25 articles] Export

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	A genetic similarity algorithm for searching the Gene Ontology terms and annotating anonymous protein sequences [My Copy] Journal of Biomedical Informatics, Vol. 41, No. 1. (February 2008), pp. 65-81. by R. Othman, S. Deris, R. Illias posted to semantic-similarity gene-ontology by MarcoAlvarez on 2009-09-22 05:05:24 as
	A Knowledge-Based Clustering Algorithm Driven by Gene Ontology [My Copy] Journal of Biopharmaceutical Statistics, Vol. 14, No. 3. (2004), pp. 687-700. by Jill Cheng, Melissa Cline, John Martin, et al.David Finkelstein, Tarif Awad, David Kulp, Michael A. Siani-Rose posted to semantic-similarity gene-ontology by MarcoAlvarez on 2009-09-22 04:56:28 as
	Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations [My Copy] Nucl. Acids Res., Vol. 34, No. 7. (26 April 2006), pp. 2137-2150. by Xiaomei Wu, Lei Zhu, Jie Guo, Da-Yong Zhang, Kui Lin posted to semantic-similarity gene-ontology by MarcoAlvarez on 2009-09-22 04:51:07 as along with 1 person iris_2001
	Semantic Similarity in Biomedical Ontologies [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000443. by Catia Pesquita, Daniel Faria, André O. Falcão, Phillip Lord, Francisco M. Couto posted to semantic-similarity gene-ontology by MarcoAlvarez on 2009-09-10 23:03:31 as along with 9 people and 1 group sobolevnrm bertelsen adamjamesreid fgibson dullhunk guhjy badger_master phoenixzxl druvus Journal picks
	The GOA database in 2009--an integrated Gene Ontology Annotation resource [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D396-403. by Daniel Barrell, Emily Dimmer, Rachael P. Huntley, David Binns, Claire O'Donovan, Rolf Apweiler posted to gene-ontology by MarcoAlvarez on 2009-09-09 20:03:49 as along with 5 people and 1 group avilella guhjy sgoetz lptolik paszkows Ensembl Compara citations
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted to gene-ontology by MarcoAlvarez on 2009-09-05 00:24:13 as along with 78 people and 8 groups josepe krapnik suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn humburg mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae 8_01 BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
	Information theory applied to the sparse gene ontology annotation network to predict novel gene function [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i529-538. by Ying Tao, Lee Sam, Jianrong Li, Carol Friedman, Yves A. Lussier posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-06 09:24:58 as along with 3 people yas ndiaz guhjy
	A transversal approach to predict gene product networks from ontology-based similarity [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (02 July 2007), 235. by Julie Chabalier, Jean Mosser, Anita Burgun posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-06 09:21:30 as along with 1 person and 2 groups dagmar dIEMoSIRIS compneur
	Quantitative assessment of relationship between sequence similarity and function similarity [My Copy] BMC Genomics, Vol. 8, No. 1. (2007), 222. by Trupti Joshi, Dong Xu posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-05 22:37:17 as along with 3 people and 1 group thegoose2 Keywan tharris C. elegans / WormBase
	Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 472. by Tao Xu, LinFang Du, Yan Zhou posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-05 22:30:47 as along with 7 people Borsti sgoetz cgaugain saket kshameer barriot phoenixzxl
	G-SESAME: web tools for GO-term-based gene similarity analysis and knowledge discovery [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W345-349. by Zhidian Du, Lin Li, Chin-Fu Chen, Philip S. Yu, James Z. Wang posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-05 22:29:07 as along with 1 person sjcockell
	Correlation between gene expression and GO semantic similarity [My Copy] Computational Biology and Bioinformatics, IEEE/ACM Transactions on In Computational Biology and Bioinformatics, IEEE/ACM Transactions on, Vol. 2, No. 4. (c 2005), pp. 330-338. by J. L. Sevilla, V. Segura, A. Podhorski, et al.E. Guruceaga, J. M. Mato, L. A. Martinez-Cruz, F. J. Corrales, A. Rubio posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 21:54:34 as along with 2 people Borsti macavity1g
	A New Path Length Measure Based on GO for Gene Similarity with Evaluation using SGD Pathways [My Copy] Computer-Based Medical Systems, 2008. CBMS '08. 21st IEEE International Symposium on In Computer-Based Medical Systems, 2008. CBMS '08. 21st IEEE International Symposium on (2008), pp. 590-595. by A. Nagar, H. Al-Mubaid posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 10:12:05 as
	Use and misuse of the gene ontology annotations [My Copy] Nature Reviews Genetics, Vol. 9, No. 7. (13 May 2008), pp. 509-515. by Seung Yon Rhee, Valerie Wood, Kara Dolinski, Sorin Draghici posted to gene-ontology by MarcoAlvarez on 2009-07-04 03:22:41 as along with 41 people and 3 groups lisa1 singhsh epigenetics davidmam Thaverkamp druvus dullhunk suizan dolchan Borelli Zephyrus VGreiff klo thomaskelder ilyashl phoenixzxl isakemal bertelsen daforerog jfr djkt guhjy aheilbut mariakmejia cmzmasek A_Olympia realzhang carlk roys gjuggler fpattyn RamuAnandakrishnan ptrobajo giovenko cabbagesofdoom tmmurali renatomilani capitall marck rvosa bpcusack 8_01 logics of knowledge FAB-lab
	GS2: an efficiently computable measure of GO-based similarity of gene sets [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1178-1184. by Troy Ruths, Derek Ruths, Luay Nakhleh posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 02:58:33 as along with 4 people guhjy sgoetz chrisamiller nuin
	Defining functional distances over gene ontology. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008), 50. by A. del Pozo, F. Pazos, A. Valencia posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 02:44:00 as along with 10 people and 2 groups biomcgary sgoetz wilbur barry tny grahamc sobolevnrm barriot carlk guhjy Bioinformatics baker-group
	Gene Ontology term overlap as a measure of gene functional similarity [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (04 August 2008), 327. by Meeta Mistry, Paul Pavlidis posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 02:37:10 as along with 5 people sgoetz bertelsen ndiaz guhjy barriot
	A relation based measure of semantic similarity for Gene Ontology annotations [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 468. by Brendan Sheehan, Aaron Quigley, Benoit Gaudin, Simon Dobson posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-07-04 02:33:33 as along with 9 people and 1 group stefanorb sgoetz sobolevnrm guhjy pengchy Keywan davidecellai phoenixzxl lptolik baker-group
	Assessing semantic similarity measures for the characterization of human regulatory pathways [My Copy] Bioinformatics, Vol. 22, No. 8. (15 April 2006), pp. 967-973. by Xiang Guo, Rongxiang Liu, Craig D. Shriver, Hai Hu, Michael N. Liebman posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-06-08 23:14:03 as along with 1 person and 1 group jmuhlich SorgerLab
	A new method to measure the semantic similarity of GO terms [My Copy] Bioinformatics, Vol. 23, No. 10. (15 May 2007), pp. 1274-1281. by James Z. Wang, Zhidian Du, Rapeeporn Payattakool, Philip S. Yu, Chin-Fu Chen posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-04-23 19:48:01 as along with 15 people Borsti anthropomorphism mlangill roys yas paszkows guhjy jfr grahamc iris_2001 macavity1g florianleitner zwang sgoetz mz2
	A new measure for functional similarity of gene products based on Gene Ontology [My Copy] BMC Bioinformatics, Vol. 7 (15 June 2006), 302. by Andreas Schlicker, Francisco S. Domingues, Jorg Rahnenfuhrer, Thomas Lengauer posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-04-23 19:47:14 as along with 8 people and 1 group stefanorb sgoetz bsamal yas CitoJam gaudan iris_2001 macavity1g T_lab
	Investigating semantic similarity measures across the Gene Ontology: the relationship between sequence and annotation [My Copy] Bioinformatics, Vol. 19, No. 10. (1 July 2003), pp. 1275-1283. by P. W. Lord, R. D. Stevens, A. Brass, C. A. Goble posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-04-23 19:45:21 as along with 12 people and 2 groups mjbell colmryan cerca operon pengchy j3xucite CitoJam ejmeij josemblazquez sgoetz roys penpen926 ilps LanguageModeling
	Get ready to GO! A biologist's guide to the Gene Ontology. [My Copy] Brief Bioinform, Vol. 6, No. 3. (September 2005), pp. 298-304. by J. Lomax posted to gene-ontology by MarcoAlvarez on 2009-04-23 19:43:02 as along with 3 people and 2 groups svozil hubcite irenas Bioinformatics dbk-lab
	Measuring semantic similarity between Gene Ontology terms [My Copy] Data & Knowledge Engineering In Business Process Management - Where business processes and web services meet, Vol. 61, No. 1. (April 2007), pp. 137-152. by Francisco M. Couto, Mario J. Silva, Pedro M. Coutinho posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-04-23 19:29:23 as along with 2 people and 2 groups ejmeij Simplicity ilps LanguageModeling
	Metrics for GO based protein semantic similarity: a systematic evaluation [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 5. (2008), S4. by Catia Pesquita, Daniel Faria, Hugo Bastos, Antonio Ferreira, Andre Falcao, Francisco Couto posted to gene-ontology semantic-similarity by MarcoAlvarez on 2009-04-23 19:23:53 as along with 6 people Borsti Keywan sgoetz yas mariakmejia guhjy

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semantic-similarity	43
clustering	30
computing-education	28
gene-ontology	25
image-annotation	20
support-vector-machine	20
data-streams	19
graph-kernel	15
protein-function	14
wordnet	12
sub-cellular-location	12
web-search	10
text-classification	8
computer-vision-education	6
neural-networks	6
graph-matching	6
protein-structure	6
web	5
nonparametric	5
classification	5
news-mining	5
agents	5
boosting	5
kernel-density-estimation	5
outer-membrane-proteins	5
self-organization	4
object-recognition	4
kernel-methods	4
distributed-clustering	4
local-descriptors	4
object-detection	4
relevance-vector-machine	3
line-simplification	3
k-means	3
image-retrieval	3
engineering-education	3
3d-games	3
image-segmentation	3
distributed-data-mining	2
transcription-factor	2
face-detection	2
hidden-markov-models	2
information-retrieval	2
one-stop-learning	2
machine-learning	2
core-sets	1
accreditation	1
research-stats	1
data-mining	1
uniprot	1
information-systems	1
pfam	1
tf-idf	1
computer-theory	1
fast-gauss-transform	1
gene-prediction	1
p2p	1
feature-selection	1
academia	1
density-estimation	1
text-retrieval	1
software-engineering	1
nearest-neighbor	1
bologna-process	1
word-sense-disambiguation	1
chemoinformatics	1
bioinformatics	1

MarcoAlvarez's gene-ontology [25 articles] Export

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