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Genome space and structure genome invariants Export

Neural Networks, 2005. IJCNN '05. Proceedings. 2005 IEEE International Joint Conference on In Neural Networks, 2005. IJCNN '05. Proceedings. 2005 IEEE International Joint Conference on, Vol. 1 (2005), pp. 440-445 vol. 1.

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algebraic-geometry algebraic-topology all-possible-biological-structures all-possible-cells all-possible-genomes all-possible-model-organisms all-possible-organisms biological-structures cantor-space cells cell-types constraints extremal-biology formal-biology formal-development genes genetic-programming genomes genome-spaces genomic-spaces hyperplanes invariances lattice-of-invariants mathematical-biology mathematical-structures model-organisms order-structures organisms sampling state-spaces synthetic-biology synthetic-dna systems-biology taxonomies transformability transformations transforming

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The traditional approach examines and collects data on a single gene, a single protein or a single reaction at a time. Given the state space of the cell, any gene can be represented by a point (vector) in this space and its components are the protein expressions of the same gene for any state. When the same process is repeated for all the genes, we obtain a set of points (vectors) which is a new space or genome space. Inside the genome space we can define invariants that give us the structure of the genome space. With the genome space and state space we can give a model for any cell and in particular for the neurons in the brain.


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